Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 3.2e-48 194.9 107 100.0
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 6.9e-35 150.6 107 80.4
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 1.1e-19 100.1 101 55.4
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.6e-18 95.5 69 71.0
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 5.8e-18 94.4 81 63.0
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 2.2e-17 92.4 81 63.0
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 6.4e-17 90.9 81 61.7
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 2.4e-16 89.0 83 60.2
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.2e-15 86.7 77 61.0
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.1e-15 85.9 69 63.8
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 7.9e-15 84.0 69 66.7
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 1.8e-14 82.8 69 60.9
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 1.8e-14 82.8 69 60.9
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 3.0e-14 82.0 97 52.6
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 3.0e-14 82.0 94 52.1
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 5.1e-14 81.3 72 59.7
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 5.1e-14 81.3 103 49.5
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 6.7e-14 80.9 85 52.9
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 8.7e-14 80.5 86 51.2
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 1.1e-13 80.1 105 46.7
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 1.5e-13 79.7 72 62.5
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 3.3e-13 78.6 59 69.5
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 5.6e-13 77.8 81 53.1
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 5.6e-13 77.8 69 63.8
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 9.6e-13 77.0 59 67.8
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 9.6e-13 77.0 69 63.8
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 2.1e-12 75.9 91 53.8
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 4.8e-12 74.7 61 63.9
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 4.8e-12 74.7 74 55.4
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 1.4e-11 73.2 103 46.6
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 1.8e-11 72.8 122 42.6
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 1.8e-11 72.8 109 45.0
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 1.8e-11 72.8 77 53.2
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 2.4e-11 72.4 61 65.6
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 2.4e-11 72.4 69 60.9
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 2.4e-11 72.4 98 48.0
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 3.1e-11 72.0 78 56.4
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 3.1e-11 72.0 75 53.3
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 9.0e-11 70.5 96 46.9
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 3.4e-10 68.6 102 43.1
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.4e-10 68.6 102 43.1
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.4e-10 68.6 102 43.1
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 3.4e-10 68.6 63 58.7
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 7.6e-10 67.4 98 45.9
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 7.6e-10 67.4 87 47.1
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 1.7e-09 66.2 87 47.1
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 2.9e-09 65.5 102 41.2
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 6.5e-09 64.3 71 53.5
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 6.5e-09 64.3 71 53.5
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 6.5e-09 64.3 95 43.2
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 1.1e-08 63.5 69 49.3
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 1.4e-08 63.2 71 52.1
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 1.4e-08 63.2 71 50.7
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 7.1e-08 60.8 93 40.9
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 7.1e-08 60.8 101 40.6
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 9.3e-08 60.5 74 45.9
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 9.3e-08 60.5 91 44.0
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 9.3e-08 60.5 72 50.0
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 1.6e-07 59.7 79 44.3
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 4.6e-07 58.2 99 39.4
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 7.9e-07 57.4 82 43.9
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 1.8e-06 56.2 75 46.7
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 5.1e-06 54.7 45 60.0


User provided reference genes

Program Settings