Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0020111 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-98 362.5 177 100.0
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 5.2e-96 354.4 172 100.0
HanXRQChr05g0152391 Helianthus annuus HOM05D001750 ORTHO05D001825 5.2e-96 354.4 172 100.0
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 5.2e-96 354.4 172 100.0
HanXRQChr11g0323701 Helianthus annuus HOM05D001750 ORTHO05D001825 5.2e-96 354.4 172 100.0
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 5.2e-96 354.4 172 100.0
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 7.3e-74 280.8 138 100.0
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 4.6e-68 261.5 175 73.1
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 4.6e-68 261.5 175 74.9
PGSC0003DMG400029008 Solanum tuberosum HOM05D001750 ORTHO05D001825 2.0e-63 246.1 175 69.1
Solyc00g500195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.6e-63 245.7 174 69.0
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 1.7e-62 243.0 175 68.6
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 1.7e-62 243.0 175 68.6
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 1.7e-62 243.0 175 68.6
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 1.7e-62 243.0 175 68.6
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 2.4e-61 239.2 175 67.4
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 5.1e-59 231.5 174 66.7
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 3.6e-57 225.3 175 64.0
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 5.2e-56 221.5 177 65.5
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 8.9e-56 220.7 175 61.7
HanXRQChr13g0413591 Helianthus annuus HOM05D001750 ORTHO05D001825 7.6e-55 217.6 106 100.0
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.4e-54 214.5 163 66.9
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.4e-54 214.5 163 66.9
Gohir.A12G229700 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.4e-54 214.5 163 66.9
Gohir.1Z049402 Gossypium hirsutum HOM05D001750 ORTHO05D001825 8.3e-54 214.2 163 66.9
EL10Ac5g11664 Beta vulgaris HOM05D001750 ORTHO05D001825 1.1e-53 213.8 168 63.1
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 5.4e-53 211.5 173 59.5
Lalb_Chr07g0191701 Lupinus albus HOM05D001750 ORTHO05D001825 1.6e-52 209.9 182 59.9
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 2.7e-52 209.1 175 58.9
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 2.7e-52 209.1 183 57.9
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-50 202.2 176 59.7
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-50 202.2 176 59.7
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-50 202.2 176 59.7
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 4.3e-50 201.8 176 58.5
EL10Ac1g00371 Beta vulgaris HOM05D001750 ORTHO05D001825 1.2e-49 200.3 156 64.1
Gohir.A12G084295 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.6e-49 199.9 165 63.0
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 2.1e-49 199.5 176 58.5
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 7.6e-47 191.0 176 56.8
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 7.6e-47 191.0 176 56.8
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 1.3e-46 190.3 176 56.2
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 1.3e-46 190.3 176 56.2
arahy.Tifrunner.gnm1.ann1.4DVC71 Arachis hypogaea HOM05D001750 ORTHO05D001825 1.0e-43 180.6 177 52.5
BolSC49t61137H Brassica oleracea HOM05D001750 ORTHO05D001825 1.7e-38 163.3 151 57.6
Manes.18G138200 Manihot esculenta HOM05D001750 ORTHO05D001825 4.9e-38 161.8 180 50.6
Lalb_Chr16g0388591 Lupinus albus HOM05D001750 ORTHO05D001825 4.2e-37 158.7 122 65.6
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 7.1e-37 157.9 158 53.2
BolSC35t60699H Brassica oleracea HOM05D001750 ORTHO05D001825 1.6e-33 146.7 121 62.8
Gohir.A08G055950 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.1e-33 146.4 110 67.3
Solyc01g017110.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.6e-33 145.6 150 50.0
HanXRQChr17g0557811 Helianthus annuus HOM05D001750 ORTHO05D001825 4.8e-33 145.2 76 93.4
Gohir.A04G058952 Gossypium hirsutum HOM05D001750 ORTHO05D001825 8.1e-33 144.4 110 66.4
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 9.0e-32 141.0 114 63.2
Lj9P89T20 Lonicera japonica HOM05D001750 ORTHO05D001825 9.0e-32 141.0 96 71.9
Prupe.2G145900 Prunus persica HOM05D001750 ORTHO05D001825 1.4e-24 117.1 92 68.5
SEGI_35420 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 3.8e-22 109.0 150 42.0
Nn1g00556 Nelumbo nucifera HOM05D001750 ORTHO05D001825 6.2e-17 91.7 58 72.4
Solyc05g013090.3 Solanum lycopersicum HOM05D001750 ORTHO05D001825 5.8e-15 85.1 100 45.0
RcHm_v2.0_CPg0501681 Rosa chinensis HOM05D001750 ORTHO05D001825 1.7e-14 83.6 63 65.1
BolC2t10591H Brassica oleracea HOM05D001750 ORTHO05D001825 4.2e-13 79.0 71 59.2
Solyc11g044643.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.6e-12 75.5 62 59.7
arahy.Tifrunner.gnm1.ann1.X5PJ61 Arachis hypogaea HOM05D000445 ORTHO05D000314 4.3e-10 68.9 74 47.3
TPR.G34249 Trifolium pratense HOM05D001750 ORTHO05D048894 4.3e-10 68.9 68 54.4
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.2e-07 60.8 44 65.9
SMO086G0048 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 2.0e-07 60.1 159 31.4
Gohir.D02G151844 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.7e-06 57.0 46 58.7
Glyma.15G246000 Glycine max HOM05D001750 ORTHO05D001825 2.2e-06 56.6 67 50.7
Glyma.06G151800 Glycine max HOM05D001750 ORTHO05D001825 2.9e-06 56.2 70 50.0


User provided reference genes

Program Settings