Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0020011 Helianthus annuus HOM05D001959 ORTHO05D001955 1.7e-48 195.7 96 100.0
HanXRQChr01g0001971 Helianthus annuus HOM05D001959 ORTHO05D001955 6.6e-45 183.7 90 98.9
ECA247G3976 Erigeron canadensis HOM05D001959 ORTHO05D001955 5.2e-18 94.4 90 56.7
HanXRQChr11g0323811 Helianthus annuus HOM05D001959 ORTHO05D001955 1.3e-16 89.7 94 57.4
Lsat_1_v5_gn_9_20441 Lactuca sativa HOM05D001959 ORTHO05D001955 1.1e-15 86.7 111 45.9
HanXRQChr08g0229981 Helianthus annuus HOM05D001959 ORTHO05D001955 1.4e-15 86.3 117 46.2
Peaxi162Scf00389g00212 Petunia axillaris HOM05D001959 ORTHO05D001955 1.5e-12 76.3 104 46.2
Lj1C181T4 Lonicera japonica HOM05D001959 ORTHO05D001955 2.5e-12 75.5 92 48.9
EL10Ac9g22397 Beta vulgaris HOM05D001959 ORTHO05D001955 7.3e-12 73.9 95 44.2
Prupe.6G091300 Prunus persica HOM05D001959 ORTHO05D001955 7.3e-12 73.9 112 46.4
Actinidia03757 Actinidia chinensis HOM05D001959 ORTHO05D001955 9.6e-12 73.6 106 47.2
Nitab4.5_0003258g0010 Nicotiana tabacum HOM05D001959 ORTHO05D001955 9.6e-12 73.6 85 48.2
MD03G1108000 Malus domestica HOM05D001959 ORTHO05D001955 1.2e-11 73.2 112 46.4
GSVIVG01025102001 Vitis vinifera HOM05D001959 ORTHO05D001955 1.6e-11 72.8 105 43.8
Solyc11g072590.3 Solanum lycopersicum HOM05D001959 ORTHO05D001955 2.1e-11 72.4 101 45.5
Sopen11g030240 Solanum pennellii HOM05D001959 ORTHO05D001955 2.1e-11 72.4 101 45.5
Dinv06354 Davidia involucrata HOM05D001959 ORTHO05D001955 2.8e-11 72.0 117 41.9
Actinidia00815 Actinidia chinensis HOM05D001959 ORTHO05D001955 3.6e-11 71.6 101 47.5
Rhsim01G0221800 Rhododendron simsii HOM05D001959 ORTHO05D001955 3.6e-11 71.6 84 48.8
TWI79G1131 Tripterygium wilfordii HOM05D001959 ORTHO05D001955 3.6e-11 71.6 102 45.1
Thecc.09G336200 Theobroma cacao HOM05D001959 ORTHO05D001955 6.2e-11 70.9 116 39.7
Gorai.013G266000 Gossypium raimondii HOM05D001959 ORTHO05D001955 8.1e-11 70.5 104 45.2
MD11G1121300 Malus domestica HOM05D001959 ORTHO05D001955 8.1e-11 70.5 112 43.8
Nitab4.5_0000888g0050 Nicotiana tabacum HOM05D001959 ORTHO05D001955 8.1e-11 70.5 108 41.7
Ah.01g014730 Amaranthus hybridus HOM05D001959 ORTHO05D001955 1.1e-10 70.1 107 40.2
Duzib168G1585 Durio zibethinus HOM05D001959 ORTHO05D001955 1.1e-10 70.1 105 41.9
Gohir.A13G229800 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.4e-10 69.7 104 45.2
Gohir.D13G235300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.4e-10 69.7 104 45.2
Atru.chr3.3737 Acer truncatum HOM05D001959 ORTHO05D001955 2.4e-10 68.9 116 39.7
AUR62025044 Chenopodium quinoa HOM05D001959 ORTHO05D001955 2.4e-10 68.9 105 43.8
Nitab4.5_0000533g0030 Nicotiana tabacum HOM05D001959 ORTHO05D001955 2.4e-10 68.9 100 43.0
PGSC0003DMG400030059 Solanum tuberosum HOM05D001959 ORTHO05D001955 4.0e-10 68.2 92 42.4
Gohir.D08G008800 Gossypium hirsutum HOM05D001959 ORTHO05D001955 5.2e-10 67.8 84 46.4
TAR633G1817 Trochodendron aralioides HOM05D001959 ORTHO05D001955 5.2e-10 67.8 93 45.2
COL.COLO4_18383 Corchorus olitorius HOM05D001959 ORTHO05D001955 1.2e-09 66.6 105 43.8
Haze_23952 Corylus avellana HOM05D001959 ORTHO05D001955 1.2e-09 66.6 98 48.0
Ciclev10027731m.g Citrus clementina HOM05D001959 ORTHO05D001955 1.5e-09 66.2 104 42.3
Nn2g12973 Nelumbo nucifera HOM05D001959 ORTHO05D001955 1.5e-09 66.2 97 43.3
Lalb_Chr14g0374841 Lupinus albus HOM05D001959 ORTHO05D001955 2.6e-09 65.5 113 40.7
Oeu047709.3 Olea europaea HOM05D001959 ORTHO05D001955 2.6e-09 65.5 107 43.0
Sc21g0000150 Simmondsia chinensis HOM05D001959 ORTHO05D001955 2.6e-09 65.5 94 42.6
DCAR_018847 Daucus carota HOM05D001959 ORTHO05D001955 3.4e-09 65.1 94 42.6
Nn2g10631 Nelumbo nucifera HOM05D001959 ORTHO05D001955 3.4e-09 65.1 102 42.2
Lsat_1_v5_gn_5_164641 Lactuca sativa HOM05D001959 ORTHO05D001955 4.4e-09 64.7 122 44.3
QL01p035905 Quercus lobata HOM05D001959 ORTHO05D001955 4.4e-09 64.7 101 43.6
Cc01_g11820 Coffea canephora HOM05D001959 ORTHO05D001955 5.8e-09 64.3 88 46.6
DCAR_018851 Daucus carota HOM05D001959 ORTHO05D001955 5.8e-09 64.3 96 40.6
Gorai.009G104400 Gossypium raimondii HOM05D001959 ORTHO05D001955 5.8e-09 64.3 123 39.8
TPR.G2975 Trifolium pratense HOM05D001959 ORTHO05D001955 5.8e-09 64.3 88 45.5
Ca_19232_v3 Cicer arietinum L. HOM05D001959 ORTHO05D001955 7.6e-09 63.9 87 47.1
Migut.N02636 Erythranthe guttata HOM05D001959 ORTHO05D001955 7.6e-09 63.9 101 41.6
FvH4_3g33920 Fragaria vesca HOM05D001959 ORTHO05D001955 7.6e-09 63.9 113 39.8
FAN11G3580 Fragaria x ananassa HOM05D001959 ORTHO05D001955 7.6e-09 63.9 113 39.8
FAN16G2581 Fragaria x ananassa HOM05D001959 ORTHO05D001955 7.6e-09 63.9 113 39.8
Potri.009G026200 Populus trichocarpa HOM05D001959 ORTHO05D001955 7.6e-09 63.9 99 44.4
TAR623G1444 Trochodendron aralioides HOM05D001959 ORTHO05D001955 7.6e-09 63.9 116 37.9
CsaV3_6G021850 Cucumis sativus L. HOM05D001959 ORTHO05D001955 9.9e-09 63.5 81 44.4
Eucgr.J02120 Eucalyptus grandis HOM05D001959 ORTHO05D001955 9.9e-09 63.5 81 44.4
Lj2C1042G4 Lonicera japonica HOM05D001959 ORTHO05D001955 9.9e-09 63.5 104 42.3
RcHm_v2.0_Chr5g0061481 Rosa chinensis HOM05D001959 ORTHO05D001955 9.9e-09 63.5 115 40.0
TAR636G0263 Trochodendron aralioides HOM05D001959 ORTHO05D001955 9.9e-09 63.5 105 41.0
MSTRG.17855 Avicennia marina HOM05D001959 ORTHO05D001955 1.3e-08 63.2 90 44.4
CSS0003965 Camellia sinensis var. sinensis HOM05D001959 ORTHO05D001955 1.3e-08 63.2 120 40.8
Psat7g221920 Pisum sativum HOM05D001959 ORTHO05D001955 1.3e-08 63.2 80 47.5
VMungo1127G1737 Vigna mungo HOM05D001959 ORTHO05D001955 1.3e-08 63.2 103 43.7
Duzib170G1143 Durio zibethinus HOM05D001959 ORTHO05D001955 1.7e-08 62.8 98 43.9
Lj3g0016662 Lotus japonicus HOM05D001959 ORTHO05D001955 1.7e-08 62.8 87 43.7
Lalb_Chr19g0137531 Lupinus albus HOM05D001959 ORTHO05D001955 1.7e-08 62.8 88 45.5
Sed0023055 Sechium edule HOM05D001959 ORTHO05D001955 1.7e-08 62.8 80 47.5
CAN.G84.35 Capsicum annuum HOM05D001959 ORTHO05D001955 2.2e-08 62.4 95 44.2
Phvul.011G071200 Phaseolus vulgaris HOM05D001959 ORTHO05D001955 2.2e-08 62.4 107 41.1
CANSAT54G1232 Cannabis sativa HOM05D001959 ORTHO05D001955 2.9e-08 62.0 97 40.2
DCAR_015568 Daucus carota HOM05D001959 ORTHO05D001955 2.9e-08 62.0 87 44.8
Migut.D02169 Erythranthe guttata HOM05D001959 ORTHO05D001955 2.9e-08 62.0 99 43.4
Glyma.12G073200 Glycine max HOM05D001959 ORTHO05D001955 2.9e-08 62.0 108 41.7
Lalb_Chr03g0027031 Lupinus albus HOM05D001959 ORTHO05D001955 2.9e-08 62.0 104 42.3
PGR102G3367 Punica granatum HOM05D001959 ORTHO05D001955 2.9e-08 62.0 90 44.4
THA.LOC104810834 Tarenaya hassleriana HOM05D001959 ORTHO05D001955 2.9e-08 62.0 77 44.2
Medtr2g093100 Medicago truncatula HOM05D001959 ORTHO05D001955 3.8e-08 61.6 103 42.7
THA.LOC104826353 Tarenaya hassleriana HOM05D001959 ORTHO05D001955 3.8e-08 61.6 97 41.2
Carub.0004s0951 Capsella rubella HOM05D001959 ORTHO05D001955 4.9e-08 61.2 90 41.1
Cpa.g.sc139.44 Carica papaya HOM05D001959 ORTHO05D001955 4.9e-08 61.2 104 39.4
Lj3g0005960 Lotus japonicus HOM05D001959 ORTHO05D001955 4.9e-08 61.2 91 44.0
Oeu058503.1 Olea europaea HOM05D001959 ORTHO05D001955 4.9e-08 61.2 96 39.6
Sed0025423 Sechium edule HOM05D001959 ORTHO05D001955 4.9e-08 61.2 78 46.2
arahy.Tifrunner.gnm1.ann1.XKSF6X Arachis hypogaea HOM05D001959 ORTHO05D001955 6.4e-08 60.8 103 42.7
FAN25G2198 Fragaria x ananassa HOM05D001959 ORTHO05D001955 6.4e-08 60.8 113 38.9
Ca_01445_v3 Cicer arietinum L. HOM05D001959 ORTHO05D001955 8.4e-08 60.5 102 42.2
Eucgr.B02454 Eucalyptus grandis HOM05D001959 ORTHO05D001955 8.4e-08 60.5 78 43.6
Carub.0005s1148 Capsella rubella HOM05D001959 ORTHO05D001955 1.1e-07 60.1 99 45.5
AUR62006483 Chenopodium quinoa HOM05D001959 ORTHO05D001955 1.1e-07 60.1 92 42.4
AUR62025045 Chenopodium quinoa HOM05D001959 ORTHO05D001955 1.1e-07 60.1 92 42.4
Glyma.11G150034 Glycine max HOM05D001959 ORTHO05D001955 1.1e-07 60.1 89 44.9
Gohir.A07G093300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.1e-07 60.1 84 44.0
Gohir.D07G097900 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.1e-07 60.1 84 44.0
Phvul.L000154 Phaseolus vulgaris HOM05D001959 ORTHO05D001955 1.1e-07 60.1 99 40.4
Psat5g276760 Pisum sativum HOM05D001959 ORTHO05D001955 1.1e-07 60.1 86 45.3
Oeu058500.1 Olea europaea HOM05D001959 ORTHO05D001955 1.4e-07 59.7 95 42.1
Potri.006G132300 Populus trichocarpa HOM05D001959 ORTHO05D001955 1.4e-07 59.7 95 40.0
TWI75G0843 Tripterygium wilfordii HOM05D001959 ORTHO05D001955 1.4e-07 59.7 96 42.7
VMungo1080G1499 Vigna mungo HOM05D001959 ORTHO05D001955 1.4e-07 59.7 90 42.2
CiPaw.13G104900 Carya illinoinensis HOM05D001959 ORTHO05D001955 1.9e-07 59.3 83 43.4
ClCG02G020770 Citrullus lanatus HOM05D001959 ORTHO05D001955 1.9e-07 59.3 78 42.3
MELO3C025725.2 Cucumis melo HOM05D001959 ORTHO05D001955 2.4e-07 58.9 79 43.0
Glyma.15G044500 Glycine max HOM05D001959 ORTHO05D001955 2.4e-07 58.9 103 41.7
vmacro14484 Vaccinium macrocarpon HOM05D001959 ORTHO05D001955 2.4e-07 58.9 81 44.4
arahy.Tifrunner.gnm1.ann1.L7TZBM Arachis hypogaea HOM05D001959 ORTHO05D001955 3.2e-07 58.5 90 42.2
PSO339G1092 Papaver somniferum HOM05D001959 ORTHO05D001955 3.2e-07 58.5 89 40.4
Medtr4g061180 Medicago truncatula HOM05D001959 ORTHO05D001955 5.4e-07 57.8 85 43.5
Lalb_Chr01g0004061 Lupinus albus HOM05D001959 ORTHO05D001955 7.1e-07 57.4 75 48.0
Potri.016G084700 Populus trichocarpa HOM05D001959 ORTHO05D001955 7.1e-07 57.4 85 41.2
unitig_747.g22012 Utricularia gibba HOM05D001959 ORTHO05D001955 7.1e-07 57.4 99 35.4
Glyma.13G329600 Glycine max HOM05D001959 ORTHO05D001955 9.3e-07 57.0 101 40.6
FAN21G0873 Fragaria x ananassa HOM05D001959 ORTHO05D001955 1.6e-06 56.2 132 33.3
Gorai.001G105300 Gossypium raimondii HOM05D001959 ORTHO05D001955 1.6e-06 56.2 82 42.7
Thecc.05G053100 Theobroma cacao HOM05D001959 ORTHO05D001955 1.6e-06 56.2 110 35.5
TPR.G11610 Trifolium pratense HOM05D001959 ORTHO05D001955 2.1e-06 55.8 89 40.4
Thhalv10016186m.g Eutrema salsugineum HOM05D001959 ORTHO05D001955 2.7e-06 55.5 92 41.3
Nitab4.5_0000022g0320 Nicotiana tabacum HOM05D001959 ORTHO05D001955 3.5e-06 55.1 84 40.5
PSO384G1408 Papaver somniferum HOM05D001959 ORTHO05D001955 3.5e-06 55.1 91 38.5
vmacro03146 Vaccinium macrocarpon HOM05D001959 ORTHO05D001955 3.5e-06 55.1 109 36.7
BcaC01g01962 Brassica carinata HOM05D001959 ORTHO05D001955 6.0e-06 54.3 91 36.3
A06p21320 Brassica napus HOM05D001959 ORTHO05D001955 6.0e-06 54.3 96 37.5
C03p70080 Brassica napus HOM05D001959 ORTHO05D001955 6.0e-06 54.3 91 36.3
BolC3t19266H Brassica oleracea HOM05D001959 ORTHO05D001955 6.0e-06 54.3 91 36.3
Manes.09G080400 Manihot esculenta HOM05D001959 ORTHO05D001955 6.0e-06 54.3 92 38.0


User provided reference genes

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