Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0018711 Helianthus annuus HOM05D004867 ORTHO05D005729 1.5e-113 412.9 213 100.0
ECA234G3341 Erigeron canadensis HOM05D004867 ORTHO05D005729 1.7e-24 117.1 200 41.0
Cc02_g27130 Coffea canephora HOM05D004867 ORTHO05D005729 8.6e-21 104.8 203 36.5
DCAR_029621 Daucus carota HOM05D004867 ORTHO05D005729 1.9e-20 103.6 206 37.9
PGSC0003DMG402006333 Solanum tuberosum HOM05D004867 ORTHO05D005729 3.3e-20 102.8 199 38.7
CSS0017046 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 9.5e-20 101.3 210 35.2
Sopen01g033570 Solanum pennellii HOM05D004867 ORTHO05D005729 2.1e-19 100.1 203 36.9
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 2.1e-19 100.1 205 37.1
Solyc01g074010.4 Solanum lycopersicum HOM05D004867 ORTHO05D005729 2.8e-19 99.8 203 36.9
SalBow5G2297 Salvia bowleyana HOM05D004867 ORTHO05D005729 1.4e-18 97.4 215 34.0
Peaxi162Scf00081g00024 Petunia axillaris HOM05D004867 ORTHO05D005729 2.3e-18 96.7 203 32.5
TAR369G0777 Trochodendron aralioides HOM05D004867 ORTHO05D005729 2.3e-18 96.7 204 38.7
Migut.B01348 Erythranthe guttata HOM05D004867 ORTHO05D005729 5.2e-18 95.5 196 37.8
HanXRQChr17g0560591 Helianthus annuus HOM05D004867 ORTHO05D005729 8.9e-18 94.7 155 43.9
CAN.G1393.5 Capsicum annuum HOM05D004867 ORTHO05D005729 1.2e-17 94.4 200 35.5
CAN.G3313.1 Capsicum annuum HOM05D004867 ORTHO05D005729 1.2e-17 94.4 200 35.5
FAN01G2199 Fragaria x ananassa HOM05D004867 ORTHO05D005729 1.2e-17 94.4 207 37.2
Oeu046529.3 Olea europaea HOM05D004867 ORTHO05D005729 1.5e-17 94.0 203 36.9
Nn2g15647 Nelumbo nucifera HOM05D004867 ORTHO05D005729 2.0e-17 93.6 202 37.1
Nitab4.5_0000892g0050 Nicotiana tabacum HOM05D004867 ORTHO05D005729 2.0e-17 93.6 203 34.5
FvH4_7g00210 Fragaria vesca HOM05D004867 ORTHO05D005729 2.6e-17 93.2 208 35.6
FAN03G1960 Fragaria x ananassa HOM05D004867 ORTHO05D005729 2.6e-17 93.2 207 35.7
FAN06G4114 Fragaria x ananassa HOM05D004867 ORTHO05D005729 2.6e-17 93.2 208 35.6
Nitab4.5_0003792g0030 Nicotiana tabacum HOM05D004867 ORTHO05D005729 2.6e-17 93.2 203 36.0
Rhsim01G0132300 Rhododendron simsii HOM05D004867 ORTHO05D005729 3.4e-17 92.8 207 36.2
Oeu013590.1 Olea europaea HOM05D004867 ORTHO05D005729 5.8e-17 92.0 214 35.0
RcHm_v2.0_Chr1g0313621 Rosa chinensis HOM05D004867 ORTHO05D005729 1.3e-16 90.9 207 33.8
FAN10G1317 Fragaria x ananassa HOM05D000038 ORTHO05D005729 1.7e-16 90.5 205 35.1
Peaxi162Scf00058g00820 Petunia axillaris HOM05D004867 ORTHO05D005729 1.7e-16 90.5 209 35.9
Sc01g0010400 Simmondsia chinensis HOM05D004867 ORTHO05D005729 4.9e-16 89.0 180 39.4
Thecc.01G415900 Theobroma cacao HOM05D004867 ORTHO05D005729 4.9e-16 89.0 207 35.3
GSVIVG01001400001 Vitis vinifera HOM05D004867 ORTHO05D005729 6.4e-16 88.6 209 34.4
Actinidia21571 Actinidia chinensis HOM05D004867 ORTHO05D005729 1.1e-15 87.8 143 42.7
CSS0003709 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 1.1e-15 87.8 210 33.8
Lj3g0015556 Lotus japonicus HOM05D004867 ORTHO05D005729 1.1e-15 87.8 207 36.2
Lsat_1_v5_gn_4_46360 Lactuca sativa HOM05D001227 ORTHO05D005729 1.4e-15 87.4 143 43.4
Hund24874 Selenicereus undatus HOM05D004867 ORTHO05D005729 1.4e-15 87.4 197 35.0
Prupe.2G004800 Prunus persica HOM05D004867 ORTHO05D005729 3.2e-15 86.3 208 34.1
Manes.07G001200 Manihot esculenta HOM05D004867 ORTHO05D005729 4.1e-15 85.9 195 35.9
Potri.001G228100 Populus trichocarpa HOM05D004867 ORTHO05D005729 5.4e-15 85.5 181 34.3
AUR62031032 Chenopodium quinoa HOM05D004867 ORTHO05D005729 7.0e-15 85.1 202 36.6
Lj7A565T27 Lonicera japonica HOM05D004867 ORTHO05D005729 7.0e-15 85.1 139 42.4
AUR62008272 Chenopodium quinoa HOM05D004867 ORTHO05D005729 9.2e-15 84.7 202 36.1
Glyma.15G269800 Glycine max HOM05D004867 ORTHO05D005729 9.2e-15 84.7 185 38.9
Ciclev10030862m.g Citrus clementina HOM05D004867 ORTHO05D005729 1.2e-14 84.3 209 33.0
PGR031G3548 Punica granatum HOM05D004867 ORTHO05D005729 1.2e-14 84.3 215 34.0
Aqoxy2G00085 Aquilegia oxysepala HOM05D004867 ORTHO05D005729 1.6e-14 84.0 185 35.1
QL04p000390 Quercus lobata HOM05D004867 ORTHO05D005729 2.0e-14 83.6 209 33.0
CANSAT11G0209 Cannabis sativa HOM05D004867 ORTHO05D005729 2.7e-14 83.2 208 33.7
Glyma.08G150000 Glycine max HOM05D004867 ORTHO05D005729 2.7e-14 83.2 187 39.6
MD14G1085700 Malus domestica HOM05D004867 ORTHO05D005729 3.5e-14 82.8 191 36.1
QL04p002433 Quercus lobata HOM05D004867 ORTHO05D005729 1.0e-13 81.3 209 31.6
COL.COLO4_23912 Corchorus olitorius HOM05D001227 ORTHO05D005729 1.3e-13 80.9 209 33.0
Dinv43921 Davidia involucrata HOM05D004867 ORTHO05D005729 1.3e-13 80.9 134 41.8
Eucgr.I00278 Eucalyptus grandis HOM05D004867 ORTHO05D005729 1.3e-13 80.9 212 31.1
TPR.G12241 Trifolium pratense HOM05D004867 ORTHO05D005729 1.7e-13 80.5 187 35.8
Psat5g206720 Pisum sativum HOM05D004867 ORTHO05D005729 3.0e-13 79.7 188 34.6
arahy.Tifrunner.gnm1.ann1.8L40SG Arachis hypogaea HOM05D004867 ORTHO05D005729 5.0e-13 79.0 197 33.5
CiPaw.13G001300 Carya illinoinensis HOM05D004867 ORTHO05D005729 5.0e-13 79.0 210 33.8
Haze_03260 Corylus avellana HOM05D004867 ORTHO05D005729 5.0e-13 79.0 210 33.3
MELO3C023945.2 Cucumis melo HOM05D004867 ORTHO05D005729 5.0e-13 79.0 187 34.2
SGA_v2.0_scaffold260G45878 Striga asiatica HOM05D004867 ORTHO05D005729 5.0e-13 79.0 212 33.5
CsaV3_3G032420 Cucumis sativus L. HOM05D004867 ORTHO05D005729 6.6e-13 78.6 187 34.2
Gohir.A08G053200 Gossypium hirsutum HOM05D004867 ORTHO05D005729 6.6e-13 78.6 208 32.7
Medtr3g026250 Medicago truncatula HOM05D004867 ORTHO05D005729 6.6e-13 78.6 188 36.2
Phvul.005G063700 Phaseolus vulgaris HOM05D004867 ORTHO05D005729 8.6e-13 78.2 186 32.8
Sabra16G0136000 Salix brachista HOM05D004867 ORTHO05D005729 1.5e-12 77.4 181 32.6
Duzib138G1711 Durio zibethinus HOM05D004867 ORTHO05D005729 1.9e-12 77.0 213 33.8
Gorai.004G065000 Gossypium raimondii HOM05D004867 ORTHO05D005729 1.9e-12 77.0 208 33.7
SGA_v2.0_scaffold5G03115 Striga asiatica HOM05D004867 ORTHO05D005729 1.9e-12 77.0 201 33.3
Gohir.D08G062800 Gossypium hirsutum HOM05D004867 ORTHO05D005729 2.5e-12 76.6 208 33.7
Cfa010718 Carpinus fangiana HOM05D004867 ORTHO05D005729 3.3e-12 76.3 201 31.3
Ca_25995_v3 Cicer arietinum L. HOM05D004867 ORTHO05D005729 4.3e-12 75.9 183 34.4
HPP92_023783 Vanilla planifolia HOM05D004867 ORTHO05D005729 5.6e-12 75.5 156 37.2
VMungo1080G0666 Vigna mungo HOM05D004867 ORTHO05D005729 5.6e-12 75.5 197 34.0
EL10Ac5g10816 Beta vulgaris HOM05D004867 ORTHO05D005729 9.5e-12 74.7 195 34.4
Aa31LG5G4500 Aethionema arabicum HOM05D004867 ORTHO05D005729 2.1e-11 73.6 212 30.7
C04p16700 Brassica napus HOM05D004867 ORTHO05D005729 2.1e-11 73.6 190 33.2
EL10Ac3g04943 Beta vulgaris HOM05D004867 ORTHO05D005729 4.7e-11 72.4 195 33.3
BcaC01g05864 Brassica carinata HOM05D004867 ORTHO05D005729 4.7e-11 72.4 201 30.8
C03p21620 Brassica napus HOM05D004867 ORTHO05D005729 1.4e-10 70.9 201 31.3
BolC3t14546H Brassica oleracea HOM05D004867 ORTHO05D005729 1.4e-10 70.9 201 31.3
ClCG10G012610 Citrullus lanatus HOM05D004867 ORTHO05D005729 1.8e-10 70.5 184 32.6
TWI53G1678 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 1.8e-10 70.5 198 31.8
Cpa.g.sc189.30 Carica papaya HOM05D004867 ORTHO05D005729 2.3e-10 70.1 211 31.3
PSO339G0402 Papaver somniferum HOM05D004867 ORTHO05D005729 2.3e-10 70.1 159 34.6
PSO384G4425 Papaver somniferum HOM05D004867 ORTHO05D005729 2.3e-10 70.1 159 34.0
Atru.chr11.2686 Acer truncatum HOM05D004867 ORTHO05D005729 3.1e-10 69.7 254 28.3
Actinidia15860 Actinidia chinensis HOM05D004867 ORTHO05D005729 3.1e-10 69.7 86 52.3
Sed0025822 Sechium edule HOM05D004867 ORTHO05D005729 3.1e-10 69.7 189 32.8
CARHR126800 Cardamine hirsuta HOM05D004867 ORTHO05D005729 5.2e-10 68.9 247 27.9
Lj9C624G5 Lonicera japonica HOM05D004867 ORTHO05D005729 5.2e-10 68.9 81 49.4
BcaB01g03940 Brassica carinata HOM05D004867 ORTHO05D005729 6.8e-10 68.6 204 30.9
AT2G32850 Arabidopsis thaliana HOM05D004867 ORTHO05D005729 8.9e-10 68.2 191 32.5
TWI73G0181 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 8.9e-10 68.2 196 31.6
Lalb_Chr19g0131991 Lupinus albus HOM05D004867 ORTHO05D005729 1.5e-09 67.4 163 37.4
Sed0010975 Sechium edule HOM05D004867 ORTHO05D005729 1.5e-09 67.4 187 33.2
Thhalv10016354m.g Eutrema salsugineum HOM05D004867 ORTHO05D005729 2.6e-09 66.6 108 41.7
unitig_749.g13484 Utricularia gibba HOM05D004867 ORTHO05D005729 2.6e-09 66.6 209 30.1
A03p18560 Brassica napus HOM05D004867 ORTHO05D005729 3.4e-09 66.2 201 28.9
Carub.0004s1428 Capsella rubella HOM05D004867 ORTHO05D005729 4.4e-09 65.9 108 40.7
Sp4g15230 Schrenkiella parvula HOM05D004867 ORTHO05D005729 4.4e-09 65.9 160 34.4
THA.LOC104816028 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 5.8e-09 65.5 179 31.8
Zm00001eb183460 Zea mays HOM05D004867 ORTHO05D005729 1.7e-08 63.9 237 29.1
BraA03t11115Z Brassica rapa HOM05D004867 ORTHO05D005729 2.2e-08 63.5 201 28.4
ATR0605G176 Amborella trichopoda HOM05D004867 ORTHO05D005729 2.9e-08 63.2 156 32.7
AL4G28350 Arabidopsis lyrata HOM05D004867 ORTHO05D005729 2.9e-08 63.2 122 40.2
SEGI_25422 Sequoiadendron giganteum HOM05D004867 ORTHO05D005729 8.3e-08 61.6 94 41.5
Lalb_Chr25g0283491 Lupinus albus HOM05D004867 ORTHO05D005729 1.1e-07 61.2 197 29.9
THA.LOC104801018 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 1.9e-07 60.5 165 32.1
Ah.13g072190 Amaranthus hybridus HOM05D004867 ORTHO05D005729 2.4e-07 60.1 204 30.9
Mapoly0022s0104 Marchantia polymorpha HOM05D004867 ORTHO05D005729 4.6e-06 55.8 87 37.9
CDE10G0581 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 6.0e-06 55.5 184 29.9


User provided reference genes

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