Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 5.5e-74 280.8 133 100.0
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 2.5e-66 255.4 133 90.2
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 9.3e-66 253.4 133 88.0
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 2.2e-59 232.3 130 81.5
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 8.5e-59 230.3 133 78.9
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 1.1e-58 229.9 130 78.5
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 4.2e-58 228.0 131 78.6
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 7.2e-58 227.3 130 77.7
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.2e-57 226.5 133 75.9
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 2.7e-57 225.3 130 77.7
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 2.7e-57 225.3 133 76.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 2.7e-57 225.3 133 76.7
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 3.6e-57 224.9 130 78.5
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 3.6e-57 224.9 133 78.2
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 6.1e-57 224.2 130 80.0
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 7.9e-57 223.8 133 76.7
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 7.9e-57 223.8 130 80.0
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.4e-56 223.0 133 78.2
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 1.8e-56 222.6 129 77.5
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.8e-56 222.6 133 78.2
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.8e-56 222.6 133 76.7
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 2.3e-56 222.2 133 76.7
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 3.0e-56 221.9 130 77.7
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 3.0e-56 221.9 133 75.2
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 5.1e-56 221.1 130 75.4
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 5.1e-56 221.1 129 76.7
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 5.1e-56 221.1 130 76.9
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 5.1e-56 221.1 129 76.0
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 5.1e-56 221.1 133 76.7
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.0e-55 219.2 129 76.7
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 2.0e-55 219.2 133 75.2
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 2.0e-55 219.2 130 77.7
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 2.0e-55 219.2 130 75.4
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 2.5e-55 218.8 129 76.0
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 3.3e-55 218.4 133 74.4
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 4.3e-55 218.0 130 74.6
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 4.3e-55 218.0 129 76.0
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 5.7e-55 217.6 133 73.7
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 5.7e-55 217.6 134 72.4
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 5.7e-55 217.6 129 75.2
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 9.7e-55 216.9 130 73.8
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.7e-55 216.9 130 73.8
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.7e-55 216.9 130 73.8
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.3e-54 216.5 133 74.4
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 2.2e-54 215.7 135 71.9
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.2e-54 215.7 130 73.1
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.2e-54 215.7 129 75.2
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 2.8e-54 215.3 131 74.8
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.8e-54 215.3 133 72.2
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.8e-54 215.3 133 72.2
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 2.8e-54 215.3 135 72.6
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 2.8e-54 215.3 135 72.6
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 4.8e-54 214.5 129 75.2
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 8.2e-54 213.8 130 75.4
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 8.2e-54 213.8 133 73.7
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 8.2e-54 213.8 129 74.4
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.1e-53 213.4 135 71.1
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 1.1e-53 213.4 129 73.6
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 1.4e-53 213.0 130 72.3
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 1.8e-53 212.6 130 75.4
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 3.1e-53 211.8 133 72.2
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.1e-53 211.5 129 76.0
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.1e-53 211.5 129 75.2
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 5.3e-53 211.1 130 73.1
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 6.9e-53 210.7 133 71.4
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 9.1e-53 210.3 133 72.2
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.2e-52 209.9 133 73.7
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 5.9e-52 207.6 137 70.8
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 7.7e-52 207.2 130 71.5
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 1.0e-51 206.8 130 71.5
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 2.9e-51 205.3 130 70.0
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 6.5e-51 204.1 130 72.3
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 6.5e-51 204.1 133 69.9
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 6.5e-51 204.1 175 57.7
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.1e-50 203.4 130 72.3
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.9e-50 202.6 129 70.5
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 2.7e-49 198.7 130 70.8
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 6.1e-49 197.6 132 71.2
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 1.0e-48 196.8 129 70.5
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.0e-48 196.8 131 66.4
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 2.3e-48 195.7 130 69.2
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.4e-47 191.4 129 68.2
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.4e-47 190.7 129 68.2
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 7.0e-45 184.1 131 64.9
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 7.0e-45 184.1 131 64.1
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 7.0e-45 184.1 131 64.1
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 1.5e-44 183.0 131 63.4
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 1.5e-44 183.0 131 63.4
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 1.5e-44 183.0 131 63.4
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 7.7e-44 180.6 131 64.9
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.7e-43 179.5 131 62.6
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 2.2e-43 179.1 132 62.1
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 5.0e-43 177.9 227 43.6
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.1e-42 176.8 113 72.6
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.4e-42 176.4 131 63.4
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 4.2e-42 174.9 131 62.6
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 7.2e-42 174.1 131 61.8
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 2.1e-41 172.6 129 61.2
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 6.1e-41 171.0 153 58.2
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 8.0e-41 170.6 132 59.8
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.4e-40 169.9 133 60.9
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 1.1e-39 166.8 129 56.6
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 7.4e-39 164.1 131 61.1
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.1e-37 160.2 132 56.8
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 7.0e-37 157.5 129 57.4
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 1.2e-36 156.8 133 56.4
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.1e-34 150.2 130 53.8
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.9e-34 149.4 135 51.1
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.7e-33 145.6 85 76.5
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 3.6e-33 145.2 85 75.3
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 6.1e-33 144.4 131 51.1
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 1.0e-32 143.7 129 53.5
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 1.8e-32 142.9 102 60.8
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 4.1e-29 131.7 79 74.7
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 4.0e-24 115.2 75 66.7
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 2.0e-23 112.8 130 46.9
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 9.8e-23 110.5 64 75.0
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 8.3e-22 107.5 72 73.6
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 5.2e-16 88.2 55 61.8
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 6.8e-16 87.8 119 39.5
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 1.7e-14 83.2 48 77.1
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 6.3e-14 81.3 48 75.0
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 6.6e-11 71.2 54 57.4
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 1.9e-10 69.7 43 72.1
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.2e-09 67.0 48 60.4
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 1.0e-08 63.9 115 33.0


User provided reference genes

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