Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0018341 Helianthus annuus HOM05D007207 ORTHO05D009041 7.5e-91 337.4 204 100.0
Lsat_1_v5_gn_1_65500 Lactuca sativa HOM05D007207 ORTHO05D009041 7.6e-43 177.9 214 59.3
ECA248G1375 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.7e-37 159.1 137 64.2
Hma1.2p1_1030F.1_g249850 Hydrangea macrophylla HOM05D007207 ORTHO05D009041 2.7e-32 142.9 109 65.1
MSTRG.17815 Avicennia marina HOM05D007207 ORTHO05D009041 7.9e-32 141.4 106 65.1
Dinv32761 Davidia involucrata HOM05D007207 ORTHO05D009041 1.3e-29 134.0 99 65.7
Actinidia20448 Actinidia chinensis HOM05D007207 ORTHO05D009041 2.2e-29 133.3 97 68.0
Peaxi162Scf00686g00043 Petunia axillaris HOM05D007207 ORTHO05D009041 9.1e-28 127.9 135 54.8
SalBow3G2981 Salvia bowleyana HOM05D007207 ORTHO05D009041 9.1e-28 127.9 134 52.2
CAN.G934.2 Capsicum annuum HOM05D007207 ORTHO05D009041 3.4e-27 125.9 138 49.3
Cc01_g11290 Coffea canephora HOM05D007207 ORTHO05D009041 2.9e-26 122.9 99 55.6
Sopen06g007140 Solanum pennellii HOM05D007207 ORTHO05D009041 6.5e-26 121.7 131 51.9
Solyc06g016750.3 Solanum lycopersicum HOM05D007207 ORTHO05D009041 8.5e-26 121.3 131 51.1
FAN25G0070 Fragaria x ananassa HOM05D007207 ORTHO05D009041 1.4e-25 120.6 133 46.6
QL01p022653 Quercus lobata HOM05D007207 ORTHO05D009041 3.2e-25 119.4 102 54.9
FvH4_3g32640 Fragaria vesca HOM05D007207 ORTHO05D009041 5.5e-25 118.6 131 45.8
FAN11G2184 Fragaria x ananassa HOM05D007207 ORTHO05D009041 5.5e-25 118.6 129 46.5
CANSAT54G0517 Cannabis sativa HOM05D007207 ORTHO05D009041 9.4e-25 117.9 94 58.5
QL01p022696 Quercus lobata HOM05D007207 ORTHO05D009041 9.4e-25 117.9 102 54.9
CiPaw.13G111000 Carya illinoinensis HOM05D007207 ORTHO05D009041 1.2e-24 117.5 100 55.0
SGA_v2.0_scaffold80G25756 Striga asiatica HOM05D007207 ORTHO05D009041 2.7e-24 116.3 146 45.2
PSO339G6489 Papaver somniferum HOM05D007207 ORTHO05D009041 4.7e-24 115.5 112 56.2
Sed0024734 Sechium edule HOM05D007207 ORTHO05D009041 4.7e-24 115.5 149 43.6
Duzib170G0585 Durio zibethinus HOM05D007207 ORTHO05D009041 1.8e-23 113.6 96 55.2
FAN21G0351 Fragaria x ananassa HOM05D007207 ORTHO05D009041 1.8e-23 113.6 116 48.3
Manes.04G022800 Manihot esculenta HOM05D007207 ORTHO05D009041 1.8e-23 113.6 95 53.7
Lj3g0024872 Lotus japonicus HOM05D007207 ORTHO05D009041 2.3e-23 113.2 93 58.1
PGR102G0648 Punica granatum HOM05D007207 ORTHO05D009041 3.0e-23 112.8 96 58.3
Thecc.09G257600 Theobroma cacao HOM05D007207 ORTHO05D009041 3.0e-23 112.8 94 55.3
Potri.009G012300 Populus trichocarpa HOM05D007207 ORTHO05D009041 5.2e-23 112.1 152 44.7
Nn2g13070 Nelumbo nucifera HOM05D007207 ORTHO05D009041 6.7e-23 111.7 96 56.2
PSO063G2032 Papaver somniferum HOM05D007207 ORTHO05D009041 6.7e-23 111.7 112 54.5
RcHm_v2.0_Chr5g0059711 Rosa chinensis HOM05D007207 ORTHO05D009041 6.7e-23 111.7 110 50.0
TWI79G0777 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 8.8e-23 111.3 160 39.4
GSVIVG01025169001 Vitis vinifera HOM05D007207 ORTHO05D009041 8.8e-23 111.3 93 54.8
Lalb_Chr01g0004241 Lupinus albus HOM05D007207 ORTHO05D009041 1.1e-22 110.9 156 42.3
Rhsim01G0217900 Rhododendron simsii HOM05D007207 ORTHO05D009041 1.1e-22 110.9 132 48.5
MD03G1114400 Malus domestica HOM05D007207 ORTHO05D009041 2.0e-22 110.2 165 41.8
TAR633G1504 Trochodendron aralioides HOM05D000656 ORTHO05D000871 2.0e-22 110.2 101 54.5
VMungo1127G1112 Vigna mungo HOM05D007207 ORTHO05D009041 2.0e-22 110.2 168 41.1
arahy.Tifrunner.gnm1.ann1.F7CTDZ Arachis hypogaea HOM05D007207 ORTHO05D009041 2.6e-22 109.8 122 44.3
Psat7g224520 Pisum sativum HOM05D007207 ORTHO05D009041 2.6e-22 109.8 114 51.8
Phvul.011G077500 Phaseolus vulgaris HOM05D007207 ORTHO05D009041 5.7e-22 108.6 123 47.2
Carub.0001s0733 Capsella rubella HOM05D007207 ORTHO05D009041 9.7e-22 107.8 127 48.0
EL10Ac9g22498 Beta vulgaris HOM05D007207 ORTHO05D009041 1.7e-21 107.1 111 51.4
TWI75G1762 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 1.7e-21 107.1 101 49.5
arahy.Tifrunner.gnm1.ann1.KZS5BJ Arachis hypogaea HOM05D007207 ORTHO05D009041 2.2e-21 106.7 122 46.7
Duzib168G2405 Durio zibethinus HOM05D007207 ORTHO05D009041 2.2e-21 106.7 98 50.0
Gohir.A07G117400 Gossypium hirsutum HOM05D007207 ORTHO05D009041 3.7e-21 105.9 94 50.0
Ca_05249_v3 Cicer arietinum L. HOM05D007207 ORTHO05D009041 4.8e-21 105.5 93 54.8
Sc06g0010040 Simmondsia chinensis HOM05D007207 ORTHO05D009041 6.3e-21 105.1 91 56.0
Glyma.12G069100 Glycine max HOM05D007207 ORTHO05D009041 1.1e-20 104.4 133 45.1
Gohir.D07G121800 Gossypium hirsutum HOM05D007207 ORTHO05D009041 1.1e-20 104.4 94 50.0
Gorai.001G131300 Gossypium raimondii HOM05D007207 ORTHO05D009041 1.1e-20 104.4 94 50.0
Ciclev10030232m.g Citrus clementina HOM05D007207 ORTHO05D009041 1.8e-20 103.6 106 45.3
Hund08142 Selenicereus undatus HOM05D007207 ORTHO05D009041 4.1e-20 102.4 113 47.8
Medtr4g059710 Medicago truncatula HOM05D007207 ORTHO05D009041 5.3e-20 102.1 93 52.7
TPR.G17530 Trifolium pratense HOM05D007207 ORTHO05D009041 7.0e-20 101.7 87 56.3
unitig_699.g19196 Utricularia gibba HOM05D007207 ORTHO05D009041 7.0e-20 101.7 76 67.1
A09p66080 Brassica napus HOM05D007207 ORTHO05D009041 9.1e-20 101.3 153 39.2
THA.LOC104815749 Tarenaya hassleriana HOM05D007207 ORTHO05D009041 9.1e-20 101.3 150 42.0
AUR62039621 Chenopodium quinoa HOM05D007207 ORTHO05D009041 1.6e-19 100.5 109 49.5
Oeu027462.1 Olea europaea HOM05D007207 ORTHO05D009041 1.6e-19 100.5 77 62.3
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 2.0e-19 100.1 155 41.9
Actinidia03739 Actinidia chinensis HOM05D007207 ORTHO05D009041 2.6e-19 99.8 96 55.2
BcaC07g42510 Brassica carinata HOM05D007207 ORTHO05D009041 2.6e-19 99.8 91 52.7
CARHR007760 Cardamine hirsuta HOM05D007207 ORTHO05D009041 2.6e-19 99.8 141 42.6
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 3.5e-19 99.4 139 40.3
BraA09t41946Z Brassica rapa HOM05D007207 ORTHO05D009041 5.9e-19 98.6 152 37.5
Thhalv10008787m.g Eutrema salsugineum HOM05D007207 ORTHO05D009041 5.9e-19 98.6 89 53.9
Aa31LG2G9300 Aethionema arabicum HOM05D007207 ORTHO05D009041 7.7e-19 98.2 135 40.7
Ah.01g015070 Amaranthus hybridus HOM05D007207 ORTHO05D009041 1.3e-18 97.4 115 46.1
BcaB02g06697 Brassica carinata HOM05D007207 ORTHO05D009041 1.7e-18 97.1 133 40.6
CDE06G2547 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 1.7e-18 97.1 136 41.9
TAR636G0495 Trochodendron aralioides HOM05D007207 ORTHO05D009041 2.2e-18 96.7 90 55.6
A06p05070 Brassica napus HOM05D007207 ORTHO05D009041 2.9e-18 96.3 159 37.1
BraA06t23713Z Brassica rapa HOM05D007207 ORTHO05D009041 2.9e-18 96.3 159 37.1
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 2.9e-18 96.3 145 40.0
BcaC05g24714 Brassica carinata HOM05D007207 ORTHO05D009041 3.8e-18 95.9 119 46.2
BolC5t29362H Brassica oleracea HOM05D007207 ORTHO05D009041 3.8e-18 95.9 119 46.2
CDE07G0349 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 8.5e-18 94.7 111 45.0
C05p06030 Brassica napus HOM05D007207 ORTHO05D009041 1.1e-17 94.4 140 42.9
HPP92_012669 Vanilla planifolia HOM05D007207 ORTHO05D009041 1.1e-17 94.4 107 47.7
MBI11_g23474_MAGBIO Magnolia biondii HOM05D007207 ORTHO05D009041 1.5e-17 94.0 86 51.2
C08p50230 Brassica napus HOM05D007207 ORTHO05D009041 1.9e-17 93.6 152 35.5
BolC8t52552H Brassica oleracea HOM05D007207 ORTHO05D009041 1.9e-17 93.6 152 35.5
Migut.N02608 Erythranthe guttata HOM05D007207 ORTHO05D009041 2.5e-17 93.2 70 61.4
vmacro14446 Vaccinium macrocarpon HOM05D007207 ORTHO05D009041 9.4e-17 91.3 90 53.3
MELO3C025765.2 Cucumis melo HOM05D007207 ORTHO05D009041 1.2e-16 90.9 147 36.7
Os03g0852300 Oryza sativa ssp. japonica HOM05D007207 ORTHO05D009041 2.1e-16 90.1 85 54.1
SEGI_13018 Sequoiadendron giganteum HOM05D007207 ORTHO05D009041 5.2e-15 85.5 104 44.2
Atru.chr3.3663 Acer truncatum HOM05D007207 ORTHO05D009041 6.7e-15 85.1 124 38.7
ClCG02G021080 Citrullus lanatus HOM05D007207 ORTHO05D009041 6.7e-15 85.1 157 34.4
PGSC0003DMG401030137 Solanum tuberosum HOM05D038777 ORTHO05D009041 7.5e-14 81.6 67 56.7
Glyma.11G148000 Glycine max HOM05D007207 ORTHO05D009041 3.7e-13 79.3 112 43.8
Sabra09G0008800 Salix brachista HOM05D007207 ORTHO05D009041 8.2e-13 78.2 207 32.4
Duzib170G0223 Durio zibethinus HOM05D007207 ORTHO05D009041 2.7e-11 73.2 73 45.2
Zm00001eb064730 Zea mays HOM05D007207 ORTHO05D009041 3.5e-11 72.8 104 41.3
Prupe.6G099600 Prunus persica HOM05D007207 ORTHO05D009041 1.3e-10 70.9 61 54.1
AUR62024995 Chenopodium quinoa HOM05D007207 ORTHO05D009041 3.8e-10 69.3 62 54.8
CsaV3_6G021790 Cucumis sativus L. HOM05D007207 ORTHO05D009041 3.8e-10 69.3 133 36.1
SHI06088 Sapria himalayana HOM05D007207 ORTHO05D009041 1.1e-09 67.8 84 42.9
Aa31LG8G12190 Aethionema arabicum HOM05D007207 ORTHO05D009041 1.5e-09 67.4 65 50.8
AagrBONN_evm.TU.Sc2ySwM_228.2356 Anthoceros agrestis HOM05D007207 ORTHO05D009041 1.5e-09 67.4 126 33.3
CBR_g30333 Chara braunii HOM05D000789 ORTHO05D000897 2.1e-08 63.5 95 35.8
Mapoly0168s0007 Marchantia polymorpha HOM05D007207 ORTHO05D009041 1.8e-07 60.5 86 39.5
Pp3c17_12030 Physcomitrium patens HOM05D007207 ORTHO05D009041 2.6e-06 56.6 90 37.8


User provided reference genes

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