Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.1e-143 513.5 289 100.0
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.2e-118 430.3 292 84.9
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 5.3e-114 414.8 276 87.3
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 5.8e-97 358.2 300 69.3
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 5.5e-95 351.7 292 69.5
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 4.6e-94 348.6 292 67.5
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 1.8e-93 346.7 260 72.7
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.1e-92 344.0 291 66.7
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.5e-92 343.6 298 67.8
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 7.4e-92 341.3 290 65.5
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 7.4e-92 341.3 290 66.2
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 2.8e-91 339.3 296 66.9
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.8e-91 339.3 290 65.5
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.1e-90 337.4 290 65.2
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.4e-90 337.0 288 65.6
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.8e-90 336.7 290 65.5
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.4e-90 336.3 292 64.4
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 3.1e-90 335.9 295 66.8
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.1e-90 335.5 301 65.8
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 5.3e-90 335.1 290 64.5
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.5e-89 333.6 299 65.6
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.5e-89 332.0 290 64.8
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.3e-88 330.5 294 63.9
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.7e-88 330.1 305 61.6
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 8.5e-88 327.8 321 60.4
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.1e-87 327.4 293 63.1
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 4.2e-87 325.5 292 64.7
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 2.7e-86 322.8 297 64.0
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 4.6e-86 322.0 223 78.9
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 4.6e-86 322.0 291 64.6
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 6.1e-86 321.6 287 63.8
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 7.9e-86 321.2 287 63.4
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 7.9e-86 321.2 293 62.1
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.0e-85 320.9 292 63.0
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.4e-85 320.5 288 63.5
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 3.0e-85 319.3 298 63.1
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 3.9e-85 318.9 296 63.2
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 5.1e-85 318.5 296 63.5
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 8.8e-85 317.8 261 67.8
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.5e-84 317.0 261 67.4
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.0e-84 316.6 286 62.6
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 2.5e-84 316.2 300 63.7
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.3e-84 315.8 286 62.9
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 4.3e-84 315.5 301 62.5
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 4.3e-84 315.5 309 60.2
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 4.3e-84 315.5 263 66.5
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 7.4e-84 314.7 285 61.1
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.7e-83 313.5 262 68.3
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.7e-83 313.5 295 61.4
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 4.8e-83 312.0 264 68.2
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 6.3e-83 311.6 291 61.2
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 8.2e-83 311.2 318 58.5
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.1e-82 310.8 293 62.5
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.1e-82 310.8 337 58.2
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.8e-82 310.1 254 67.7
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 2.4e-82 309.7 301 60.8
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 4.1e-82 308.9 263 66.2
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 4.1e-82 308.9 263 66.2
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 5.3e-82 308.5 300 61.7
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 1.5e-81 307.0 293 61.1
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.5e-81 307.0 263 65.8
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 2.0e-81 306.6 285 61.8
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 3.4e-81 305.8 293 62.1
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 3.4e-81 305.8 309 58.9
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.0e-80 304.3 313 57.8
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 1.7e-80 303.5 260 65.4
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.7e-80 303.5 294 60.2
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 2.9e-80 302.8 290 60.7
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 2.9e-80 302.8 277 62.5
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 3.8e-80 302.4 261 66.3
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 5.0e-80 302.0 297 61.3
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 8.5e-80 301.2 287 63.1
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.4e-79 300.4 297 60.9
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 5.5e-79 298.5 292 61.0
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.2e-78 297.4 292 59.9
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 6.1e-78 295.0 287 60.6
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 6.1e-78 295.0 307 58.3
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 7.9e-78 294.7 310 56.8
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.4e-77 293.9 311 56.9
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.4e-77 293.9 288 58.3
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.4e-77 293.9 288 58.3
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 2.3e-77 293.1 317 56.8
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.9e-77 292.4 286 58.4
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.5e-76 290.4 306 56.5
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.7e-75 285.8 290 57.6
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.7e-75 285.8 290 57.6
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 6.3e-75 285.0 265 64.5
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.1e-74 284.3 287 59.6
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.4e-74 283.9 286 59.1
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.0e-72 277.7 315 53.0
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 2.2e-72 276.6 286 58.4
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 5.5e-71 271.9 190 76.8
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 5.5e-71 271.9 287 57.1
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 1.0e-69 267.7 288 54.5
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 8.8e-69 264.6 286 56.3
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.2e-67 260.0 182 74.2
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-66 257.3 286 55.2
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.8e-66 256.9 292 56.5
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.6e-65 253.8 291 54.0
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 9.4e-63 244.6 286 52.4
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.7e-62 243.0 182 70.9
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.5e-60 237.3 185 80.5
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 2.6e-60 236.5 417 41.0
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 1.1e-47 194.5 160 78.1
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 9.5e-47 191.4 142 72.5
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.2e-46 191.0 220 51.8
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 4.3e-39 166.0 170 58.2
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.8e-38 163.3 141 65.2
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.3e-32 144.4 165 53.9
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 2.8e-30 136.7 144 59.0
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 3.1e-29 133.3 77 85.7
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.6e-28 130.2 146 52.7
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 3.6e-22 109.8 148 49.3
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 9.9e-20 101.7 113 60.2
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 8.3e-19 98.6 108 55.6
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.4e-18 97.1 109 57.8
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 8.9e-13 78.6 192 32.8
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.7e-11 74.3 42 83.3
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 2.1e-09 67.4 196 32.7
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.5e-07 61.2 115 44.3


User provided reference genes

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