Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 2.3e-86 322.0 146 100.0
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 1.6e-66 256.1 142 80.3
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 6.2e-63 244.2 145 76.6
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 7.9e-58 227.3 145 70.3
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.3e-57 225.7 146 69.2
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 6.7e-57 224.2 145 69.0
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 1.6e-55 219.5 124 77.4
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 2.1e-55 219.2 147 68.0
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 2.8e-55 218.8 139 69.1
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 4.8e-55 218.0 148 68.2
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 1.1e-54 216.9 148 68.9
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 3.1e-54 215.3 107 85.0
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 3.1e-54 215.3 132 73.5
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 4.0e-54 214.9 132 72.0
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 4.0e-54 214.9 147 65.3
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 9.0e-54 213.8 147 67.3
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.2e-53 213.4 126 74.6
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 2.6e-53 212.2 145 64.1
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 2.6e-53 212.2 145 66.9
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 7.6e-53 210.7 105 84.8
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 7.6e-53 210.7 145 67.6
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 7.6e-53 210.7 105 84.8
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 1.7e-52 209.5 114 77.2
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 1.7e-52 209.5 118 74.6
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 2.2e-52 209.1 119 74.8
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 2.9e-52 208.8 150 64.7
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 3.8e-52 208.4 105 82.9
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 3.8e-52 208.4 146 65.1
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.4e-51 206.5 151 60.9
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.4e-51 206.5 145 66.9
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 1.9e-51 206.1 111 78.4
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 2.4e-51 205.7 118 74.6
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 3.2e-51 205.3 105 81.0
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 5.5e-51 204.5 108 78.7
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 7.1e-51 204.1 113 76.1
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 9.3e-51 203.8 105 81.0
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.2e-50 203.4 105 80.0
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.2e-50 203.4 105 80.0
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 1.2e-50 203.4 108 76.9
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 2.7e-50 202.2 108 76.9
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 2.7e-50 202.2 112 77.7
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 2.7e-50 202.2 145 64.1
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 4.6e-50 201.4 108 75.0
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.0e-49 200.3 108 77.8
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 2.3e-49 199.1 151 60.3
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 2.3e-49 199.1 143 64.3
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 3.0e-49 198.7 149 61.1
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 3.0e-49 198.7 109 78.9
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 3.9e-49 198.4 121 67.8
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 5.1e-49 198.0 112 71.4
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 5.1e-49 198.0 104 79.8
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 8.7e-49 197.2 143 63.6
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.1e-48 196.8 194 51.0
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 1.5e-48 196.4 158 57.0
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 1.9e-48 196.1 140 62.1
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 4.3e-48 194.9 104 76.0
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.2e-45 186.8 141 61.7
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.5e-45 186.4 104 74.0
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 7.6e-45 184.1 105 72.4
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 1.3e-44 183.3 91 83.5
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 4.3e-40 168.3 88 80.7
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.3e-39 166.8 100 70.0
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 1.3e-39 166.8 104 66.3
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 6.3e-39 164.5 104 66.3
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 3.4e-37 158.7 97 71.1
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 6.5e-36 154.5 76 84.2
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 8.5e-36 154.1 77 83.1
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 5.7e-32 141.4 74 82.4
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 3.2e-27 125.6 74 66.2
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 4.2e-27 125.2 74 66.2
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 8.2e-23 110.9 105 53.3
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.9e-17 92.0 54 66.7
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 3.3e-08 62.4 75 50.7
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 3.7e-07 58.9 32 68.8
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 8.2e-07 57.8 38 57.9


User provided reference genes

Program Settings