Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 3.3e-107 391.7 201 100.0
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 7.2e-62 241.1 206 65.0
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 2.2e-58 229.6 211 64.5
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 2.8e-45 186.0 224 50.9
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 9.8e-43 177.6 196 51.0
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 1.3e-42 177.2 216 51.4
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.7e-42 176.8 225 49.3
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 9.2e-41 171.0 224 47.3
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 3.5e-40 169.1 222 47.7
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 6.0e-40 168.3 211 51.2
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.0e-39 166.0 226 44.7
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 5.1e-39 165.2 223 49.3
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 1.5e-38 163.7 224 48.7
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 2.5e-38 162.9 207 48.3
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.3e-38 162.5 226 42.5
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 1.6e-37 160.2 233 42.5
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 2.1e-37 159.8 213 48.8
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 6.2e-37 158.3 174 54.6
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 1.1e-36 157.5 213 48.4
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.8e-36 156.8 211 46.9
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 2.3e-36 156.4 212 45.8
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 4.0e-36 155.6 220 42.7
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 4.0e-36 155.6 277 42.2
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 6.8e-36 154.8 209 45.5
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 3.4e-35 152.5 221 42.5
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 3.4e-35 152.5 203 45.3
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 9.9e-35 151.0 206 45.1
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.3e-34 150.6 201 45.8
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.2e-34 149.8 199 44.2
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 2.2e-34 149.8 104 70.2
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 2.9e-34 149.4 228 44.3
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.9e-34 149.4 227 43.6
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 3.7e-34 149.1 170 55.9
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 3.7e-34 149.1 210 41.9
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 4.9e-34 148.7 199 44.2
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 6.4e-34 148.3 210 50.0
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 8.3e-34 147.9 205 44.4
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 8.3e-34 147.9 161 51.6
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.1e-33 147.5 182 51.1
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.4e-33 147.1 128 61.7
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 1.9e-33 146.7 209 44.0
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 4.1e-33 145.6 199 47.7
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 1.6e-32 143.7 222 45.0
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 2.1e-32 143.3 209 44.5
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 2.1e-32 143.3 202 45.5
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 2.7e-32 142.9 204 47.5
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 3.5e-32 142.5 218 41.3
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 4.6e-32 142.1 203 47.3
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 4.6e-32 142.1 209 43.1
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 4.6e-32 142.1 204 43.1
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 7.8e-32 141.4 209 45.5
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 1.0e-31 141.0 204 47.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 1.0e-31 141.0 199 43.2
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.7e-31 140.2 210 44.3
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 2.3e-31 139.8 202 43.1
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.3e-31 139.8 204 44.1
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.1e-30 137.5 205 44.4
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 1.1e-30 137.5 227 41.4
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 1.5e-30 137.1 227 41.4
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 1.9e-30 136.7 213 42.3
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 2.5e-30 136.3 212 42.5
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.5e-30 136.3 199 45.2
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.5e-30 136.3 199 45.2
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 5.6e-30 135.2 207 44.0
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 7.3e-30 134.8 226 40.7
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 9.5e-30 134.4 209 45.0
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 9.5e-30 134.4 204 43.1
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.2e-29 134.0 99 66.7
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 2.1e-29 133.3 181 47.5
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 2.1e-29 133.3 152 49.3
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 3.6e-29 132.5 215 41.9
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 4.7e-29 132.1 92 70.7
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 4.7e-29 132.1 231 40.3
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 6.2e-29 131.7 214 42.5
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.4e-28 130.6 187 49.2
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 3.1e-28 129.4 160 48.1
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 5.2e-28 128.6 94 63.8
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 6.8e-28 128.3 222 41.0
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 2.0e-27 126.7 98 68.4
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 2.6e-27 126.3 186 47.3
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 7.6e-27 124.8 218 39.4
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.7e-26 123.6 162 46.3
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 2.2e-26 123.2 160 48.8
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 4.9e-26 122.1 226 39.8
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 6.4e-26 121.7 233 36.5
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 8.4e-26 121.3 158 44.3
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.1e-25 120.9 155 48.4
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.9e-25 120.2 221 38.0
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 3.2e-25 119.4 170 45.3
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 7.1e-25 118.2 191 38.7
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 7.8e-24 114.8 87 64.4
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-23 113.6 95 55.8
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 2.3e-23 113.2 199 39.2
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.5e-22 109.8 96 56.2
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 9.6e-22 107.8 128 47.7
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 9.0e-20 101.3 91 54.9
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 9.0e-20 101.3 83 63.9
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 3.0e-15 86.3 126 37.3
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 1.1e-12 77.8 208 30.8
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 3.1e-12 76.3 129 37.2
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 6.9e-12 75.1 90 43.3
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 1.9e-09 67.0 101 39.6
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.9e-06 57.0 183 31.7


User provided reference genes

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