Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0014301 Helianthus annuus HOM05D000200 ORTHO05D025043 2.2e-92 342.4 195 100.0
ECA248G1400 Erigeron canadensis HOM05D000200 ORTHO05D000262 3.2e-22 109.4 177 47.5
Migut.N02193 Erythranthe guttata HOM05D000200 ORTHO05D000262 6.9e-17 91.7 172 45.3
Cc01_g18570 Coffea canephora HOM05D000200 ORTHO05D000262 3.4e-16 89.4 160 44.4
Peaxi162Scf01530g00045 Petunia axillaris HOM05D000200 ORTHO05D000262 2.2e-15 86.7 191 41.4
SGA_v2.0_scaffold98G29337 Striga asiatica HOM05D000200 ORTHO05D000262 2.9e-15 86.3 195 41.0
AUR62011905 Chenopodium quinoa HOM05D000200 ORTHO05D000262 4.9e-15 85.5 186 40.9
MSTRG.17482 Avicennia marina HOM05D000200 ORTHO05D000262 8.4e-15 84.7 158 44.3
Thhalv10006411m.g Eutrema salsugineum HOM05D000200 ORTHO05D000262 2.3e-12 76.6 102 52.0
CARHR168530 Cardamine hirsuta HOM05D000200 ORTHO05D000262 3.9e-12 75.9 112 50.9
Sp5g04560 Schrenkiella parvula HOM05D000200 ORTHO05D000262 5.1e-12 75.5 102 51.0
Lsat_1_v5_gn_5_181620 Lactuca sativa HOM05D000200 ORTHO05D000262 6.7e-12 75.1 166 39.2
BcaC08g44902 Brassica carinata HOM05D000200 ORTHO05D000262 1.5e-11 73.9 110 50.0
C06p25220 Brassica napus HOM05D000200 ORTHO05D000262 1.5e-11 73.9 110 50.0
BolC6t37681H Brassica oleracea HOM05D000200 ORTHO05D000262 1.5e-11 73.9 110 50.0
AT3G58160 Arabidopsis thaliana HOM05D000200 ORTHO05D000262 1.9e-11 73.6 117 47.9
BcaB02g07546 Brassica carinata HOM05D000200 ORTHO05D000262 2.5e-11 73.2 110 50.0
Carub.0005s2501 Capsella rubella HOM05D000200 ORTHO05D000262 2.5e-11 73.2 125 47.2
AL5G39850 Arabidopsis lyrata HOM05D000200 ORTHO05D000262 3.3e-11 72.8 117 47.9
BcaB02g08274 Brassica carinata HOM05D000200 ORTHO05D000262 5.6e-11 72.0 118 48.3
A07p23950 Brassica napus HOM05D000200 ORTHO05D000262 5.6e-11 72.0 110 49.1
Sabra02G0033500 Salix brachista HOM05D000200 ORTHO05D000262 5.6e-11 72.0 203 34.5
A04p02700 Brassica napus HOM05D000200 ORTHO05D000262 7.4e-11 71.6 119 49.6
BraA04t15996Z Brassica rapa HOM05D000200 ORTHO05D000262 7.4e-11 71.6 119 49.6
BraA07t30046Z Brassica rapa HOM05D000200 ORTHO05D000262 7.4e-11 71.6 110 49.1
Ciclev10024066m.g Citrus clementina HOM05D000200 ORTHO05D000262 7.4e-11 71.6 108 47.2
Aa31LG10G12880 Aethionema arabicum HOM05D000200 ORTHO05D000262 9.6e-11 71.2 132 47.0
AUR62024746 Chenopodium quinoa HOM05D000200 ORTHO05D000262 9.6e-11 71.2 186 38.7
Prupe.8G228100 Prunus persica HOM05D000200 ORTHO05D000262 1.6e-10 70.5 127 42.5
Atru.chr5.1629 Acer truncatum HOM05D000200 ORTHO05D000262 4.8e-10 68.9 119 42.9
MD05G1201700 Malus domestica HOM05D000200 ORTHO05D000262 8.2e-10 68.2 177 35.6
THA.LOC104802247 Tarenaya hassleriana HOM05D000200 ORTHO05D000262 1.4e-09 67.4 124 45.2
RcHm_v2.0_Chr6g0288911 Rosa chinensis HOM05D000200 ORTHO05D000262 1.8e-09 67.0 113 44.2
Migut.D00402 Erythranthe guttata HOM05D000200 ORTHO05D000262 3.1e-09 66.2 172 33.7
FAN15G1287 Fragaria x ananassa HOM05D000200 ORTHO05D000262 4.0e-09 65.9 160 36.9
FAN24G0764 Fragaria x ananassa HOM05D000200 ORTHO05D000262 5.3e-09 65.5 160 37.5
CANSAT01G0409 Cannabis sativa HOM05D000200 ORTHO05D000262 6.9e-09 65.1 169 36.7
SalBow6G2632 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.2e-08 64.3 185 35.7
Duzib138G1862 Durio zibethinus HOM05D000200 ORTHO05D000262 1.5e-08 63.9 100 45.0
FvH4_2g22050 Fragaria vesca HOM05D000200 ORTHO05D000262 1.5e-08 63.9 160 37.5
SalBow6G3108 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.5e-08 63.9 185 35.7
Nitab4.5_0001044g0160 Nicotiana tabacum HOM05D000200 ORTHO05D000262 2.0e-08 63.5 186 36.0
Potri.002G041800 Populus trichocarpa HOM05D000200 ORTHO05D000262 2.6e-08 63.2 175 33.7
Oeu028667.2 Olea europaea HOM05D000200 ORTHO05D000262 3.4e-08 62.8 136 39.7
Ah.11g049840 Amaranthus hybridus HOM05D000200 ORTHO05D000262 4.5e-08 62.4 203 34.0
Haze_24585 Corylus avellana HOM05D000200 ORTHO05D025043 4.5e-08 62.4 194 34.0
Eucgr.B01521 Eucalyptus grandis HOM05D000200 ORTHO05D000262 7.6e-08 61.6 186 34.9
MD10G1188400 Malus domestica HOM05D000200 ORTHO05D000262 1.7e-07 60.5 182 32.4
PGR119G0535 Punica granatum HOM05D000200 ORTHO05D000262 2.2e-07 60.1 200 31.5
CAN.G771.21 Capsicum annuum HOM05D000200 ORTHO05D000262 2.9e-07 59.7 186 33.9
DCAR_007338 Daucus carota HOM05D000200 ORTHO05D000262 2.9e-07 59.7 93 46.2
ECA247G2203 Erigeron canadensis HOM05D000200 ORTHO05D000262 2.9e-07 59.7 109 42.2
FAN20G1012 Fragaria x ananassa HOM05D000200 ORTHO05D000262 3.8e-07 59.3 174 35.6
DCAR_012528 Daucus carota HOM05D000200 ORTHO05D000262 4.9e-07 58.9 156 37.2
CsaV3_7G026980 Cucumis sativus L. HOM05D000200 ORTHO05D000262 6.5e-07 58.5 140 36.4
HanXRQChr11g0336861 Helianthus annuus HOM05D000200 ORTHO05D025043 6.5e-07 58.5 49 69.4
Sopen06g035340 Solanum pennellii HOM05D000200 ORTHO05D000262 1.4e-06 57.4 182 35.7
Solyc06g083960.3 Solanum lycopersicum HOM05D000200 ORTHO05D000262 1.9e-06 57.0 186 34.9
TWI12G0133 Tripterygium wilfordii HOM05D000200 ORTHO05D000262 1.9e-06 57.0 127 37.0
SGA_v2.0_scaffold1G00583 Striga asiatica HOM05D000200 ORTHO05D000262 2.5e-06 56.6 196 33.2
DCAR_024720 Daucus carota HOM05D000200 ORTHO05D000262 3.2e-06 56.2 185 33.0
MELO3C012738.2 Cucumis melo HOM05D000200 ORTHO05D000262 4.2e-06 55.8 140 35.7


User provided reference genes

Program Settings