Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 5.0e-293 1010.4 512 100.0
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 7.5e-289 996.5 512 98.2
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 5.5e-207 724.5 516 74.2
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.6e-198 696.4 520 69.6
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.3e-160 570.5 518 57.7
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 3.0e-160 569.3 518 57.7
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-158 563.9 516 57.6
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-158 563.5 516 57.6
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.8e-157 560.1 517 57.1
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 2.3e-157 559.7 520 56.0
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-156 557.4 516 57.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-156 557.4 516 57.0
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.5e-156 557.0 516 55.8
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 5.4e-154 548.5 515 56.9
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 3.5e-153 545.8 520 55.0
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 6.6e-152 541.6 507 56.6
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 4.3e-151 538.9 513 54.8
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 9.5e-151 537.7 520 53.5
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.0e-148 530.0 509 55.8
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.7e-147 526.9 509 54.8
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.4e-146 523.9 513 53.4
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.2e-146 522.7 523 54.9
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 3.2e-146 522.7 518 53.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 4.1e-146 522.3 499 56.5
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 9.2e-146 521.2 526 53.8
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.2e-145 520.8 504 54.6
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.6e-145 520.4 512 51.4
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 4.6e-145 518.8 512 52.9
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 3.9e-144 515.8 517 51.5
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.9e-143 513.5 525 53.9
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 5.6e-143 511.9 537 50.8
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 2.8e-142 509.6 517 50.7
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 3.1e-141 506.1 512 51.4
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 7.6e-140 501.5 428 58.6
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 9.9e-140 501.1 517 49.9
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 3.2e-138 496.1 512 52.3
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 7.8e-137 491.5 526 51.9
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 1.3e-136 490.7 523 52.6
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.9e-135 486.9 507 50.3
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 9.6e-135 484.6 507 50.3
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.3e-134 484.2 515 50.1
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 1.3e-134 484.2 516 49.2
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 2.4e-133 479.9 515 51.7
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 2.4e-133 479.9 492 53.9
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.4e-133 479.9 509 49.1
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 3.1e-133 479.6 516 51.0
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 6.9e-133 478.4 506 49.4
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 9.0e-133 478.0 509 50.5
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.5e-132 477.2 497 51.7
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 3.4e-132 476.1 518 50.0
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 5.8e-132 475.3 506 50.4
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 7.6e-132 474.9 510 49.6
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.7e-131 473.8 515 49.7
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 1.7e-131 473.8 518 49.6
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 6.4e-131 471.9 520 50.2
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 6.4e-131 471.9 522 51.0
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 1.1e-130 471.1 520 50.0
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.4e-130 470.7 512 50.2
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.6e-129 467.2 519 48.2
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 2.1e-129 466.8 496 52.2
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 5.1e-128 462.2 519 47.4
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 5.1e-128 462.2 517 48.0
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 6.7e-128 461.8 511 47.0
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.1e-127 461.1 488 50.6
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.1e-127 461.1 512 49.4
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.1e-127 461.1 512 48.0
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 2.5e-127 459.9 497 50.7
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 3.3e-127 459.5 504 50.2
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 3.3e-127 459.5 491 50.5
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 2.1e-126 456.8 515 48.2
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.1e-125 454.5 520 48.7
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 3.1e-125 453.0 491 48.3
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 3.1e-125 453.0 514 44.9
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.6e-124 449.9 487 49.9
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 6.4e-123 445.3 487 47.6
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 4.2e-122 442.6 495 48.5
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 7.1e-122 441.8 516 47.3
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 9.3e-122 441.4 497 49.9
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-121 440.7 487 49.5
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.6e-121 440.7 513 45.0
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.3e-120 437.6 499 50.3
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 3.9e-120 436.0 495 48.5
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 3.3e-119 433.0 532 47.9
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 5.6e-119 432.2 497 47.3
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 4.8e-118 429.1 511 48.1
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.4e-117 426.8 507 50.9
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 1.5e-116 424.1 508 47.8
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 4.5e-116 422.5 509 47.7
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.0e-115 421.4 397 54.7
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 4.6e-113 412.5 497 45.7
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 5.7e-111 405.6 346 58.1
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 7.4e-111 405.2 496 47.6
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 9.0e-109 398.3 491 45.8
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 3.6e-105 386.3 514 43.0
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 3.0e-104 383.3 467 49.7
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 4.3e-103 379.4 514 44.0
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 4.1e-101 372.9 399 50.6
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.1e-97 360.5 469 44.3
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 7.9e-89 332.0 269 58.7
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.0e-87 327.4 335 49.6
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 9.7e-87 325.1 390 45.9
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.2e-82 310.1 344 50.6
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.2e-79 301.6 328 52.7
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.3e-67 260.8 524 35.1
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-66 258.5 196 61.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-66 258.5 196 61.2
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.6e-65 254.6 522 33.5
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 6.8e-64 249.2 219 56.6
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.1e-58 231.9 509 33.2
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 6.8e-56 222.6 157 63.7
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.4e-48 198.4 514 27.6
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 2.6e-39 167.5 373 28.4
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 4.4e-39 166.8 193 50.3
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-28 131.7 172 47.7
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 7.3e-26 122.9 143 48.3
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 1.2e-25 122.1 143 48.3
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 2.8e-25 120.9 116 55.2
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.7e-22 111.7 115 50.4
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 7.1e-21 106.3 115 47.8
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 5.1e-19 100.1 222 31.5
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 2.1e-17 94.7 173 32.4
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 4.8e-17 93.6 124 41.1
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 4.2e-13 80.5 118 44.1
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.5e-10 71.2 40 72.5


User provided reference genes

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