Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 7.6e-280 966.5 470 100.0
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 2.0e-240 835.5 476 87.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 3.2e-238 828.2 461 87.0
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 1.1e-212 743.4 460 77.4
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.4e-209 733.0 463 76.2
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 2.1e-208 729.2 468 74.4
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 3.1e-204 715.3 462 74.0
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 4.0e-204 714.9 469 72.7
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 5.2e-204 714.5 461 74.0
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 4.9e-202 708.0 436 76.6
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.2e-200 703.4 468 71.6
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 2.7e-200 702.2 458 72.7
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 4.6e-200 701.4 468 71.4
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 6.0e-200 701.0 468 71.6
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 1.0e-199 700.3 464 72.2
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.0e-199 700.3 469 71.2
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.3e-199 699.9 477 70.6
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.3e-199 699.1 464 70.5
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 4.3e-198 694.9 442 73.8
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 5.6e-198 694.5 460 71.3
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 5.6e-198 694.5 439 75.2
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 3.6e-197 691.8 468 70.5
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 3.6e-197 691.8 464 70.0
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 6.2e-197 691.0 490 68.8
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 2.4e-196 689.1 472 70.8
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 6.8e-196 687.6 468 69.9
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 2.0e-195 686.0 458 71.8
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 2.6e-195 685.6 456 72.4
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 5.8e-195 684.5 470 69.6
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 3.8e-194 681.8 472 69.3
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 6.4e-194 681.0 468 69.4
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 6.4e-194 681.0 458 71.0
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 8.4e-194 680.6 468 69.7
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.9e-193 679.5 432 75.9
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 4.2e-193 678.3 458 71.0
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 1.2e-192 676.8 459 69.7
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 2.7e-192 675.6 464 70.0
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.7e-191 672.9 478 68.8
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.5e-190 669.1 469 69.3
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 5.6e-190 667.9 432 73.8
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 9.6e-190 667.2 440 71.4
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.2e-189 666.8 469 69.9
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.4e-188 663.3 466 69.3
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 3.1e-188 662.1 432 73.1
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 5.2e-188 661.4 462 67.7
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.2e-187 660.2 468 66.7
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 2.6e-187 659.1 468 65.8
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 4.4e-187 658.3 468 65.8
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 4.9e-186 654.8 458 68.6
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 8.4e-186 654.1 469 68.0
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 2.7e-184 649.0 467 66.4
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 4.6e-184 648.3 438 69.4
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 7.8e-184 647.5 446 70.6
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 2.3e-183 646.0 395 77.7
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 3.9e-183 645.2 390 77.4
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 8.7e-183 644.0 442 69.0
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.5e-182 643.3 468 66.0
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.9e-182 642.9 390 77.2
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 2.5e-182 642.5 427 69.6
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 3.3e-182 642.1 470 66.8
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 7.3e-182 641.0 427 71.0
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.3e-181 640.2 438 68.3
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.3e-181 640.2 450 70.2
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.3e-181 640.2 438 69.4
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 1.6e-181 639.8 437 69.8
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 2.4e-180 636.0 467 65.7
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 3.1e-180 635.6 493 62.3
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 3.1e-180 635.6 442 68.1
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 3.1e-180 635.6 438 68.9
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 3.1e-180 635.6 438 68.9
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 5.3e-180 634.8 438 68.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 2.6e-179 632.5 437 69.8
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 5.8e-179 631.3 457 66.1
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 7.6e-179 630.9 392 75.8
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 8.4e-178 627.5 366 78.7
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.6e-176 623.2 432 68.8
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 1.8e-175 619.8 435 69.0
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 6.7e-175 617.8 469 64.2
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 1.1e-174 617.1 364 76.9
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 5.6e-174 614.8 471 64.1
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.1e-172 610.5 387 74.2
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.4e-172 609.4 397 73.0
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 9.0e-172 607.4 390 71.8
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 3.2e-169 599.0 443 67.5
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 7.9e-168 594.3 465 63.9
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 3.0e-167 592.4 427 65.6
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 7.4e-166 587.8 439 63.8
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 9.0e-164 580.9 447 62.4
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 2.9e-162 575.9 394 69.3
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 7.1e-161 571.2 464 61.4
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 5.7e-158 561.6 480 60.4
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.4e-153 547.0 432 63.0
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.8e-151 540.0 333 75.4
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 4.5e-147 525.4 386 63.2
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 7.0e-140 501.5 460 55.2
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.2e-126 457.6 458 52.6
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.7e-114 417.2 313 66.5
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 5.2e-103 379.0 212 83.5
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.4e-100 370.9 387 48.1
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 5.0e-98 362.5 451 43.2
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 5.6e-97 359.0 444 44.8
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 4.7e-96 355.9 259 71.0
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 2.5e-89 333.6 220 73.2
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 7.5e-86 322.0 277 59.9
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 9.9e-78 295.0 321 51.1
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 3.2e-68 263.5 159 76.7
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 2.5e-65 253.8 261 49.4
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 5.6e-65 252.7 155 77.4
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 4.3e-49 199.9 254 46.9
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.2e-45 187.6 128 69.5
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.3e-29 135.2 123 56.1
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 4.7e-27 126.7 130 50.8
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.4e-26 125.2 75 77.3
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 3.0e-26 124.0 70 78.6
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.8e-24 117.5 81 70.4
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 3.2e-20 104.0 137 46.0
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 7.2e-20 102.8 79 67.1
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 5.2e-18 96.7 90 46.7
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 6.3e-08 63.2 112 39.3


User provided reference genes

Program Settings