Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 5.2e-309 1063.5 534 100.0
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 1.9e-266 922.2 541 86.0
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 3.1e-245 851.7 471 90.4
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 6.7e-232 807.4 543 75.7
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 5.7e-231 804.3 545 75.4
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 1.7e-230 802.7 545 75.6
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 2.2e-227 792.3 546 73.6
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 7.2e-226 787.3 546 74.5
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 1.2e-225 786.6 521 75.8
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 3.6e-225 785.0 536 74.6
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 3.0e-224 781.9 518 75.5
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 6.7e-224 780.8 542 73.4
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 5.7e-223 777.7 537 73.0
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 2.4e-221 772.3 535 72.0
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 3.1e-221 771.9 535 72.1
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 5.3e-221 771.2 516 73.4
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 2.0e-220 769.2 539 72.4
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 5.9e-220 767.7 533 72.6
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 7.7e-220 767.3 508 74.6
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 1.0e-219 766.9 541 71.5
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 2.9e-219 765.4 542 72.5
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 2.9e-219 765.4 504 74.6
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 1.9e-218 762.7 537 71.7
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 2.5e-218 762.3 546 70.5
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 3.6e-217 758.4 516 72.5
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 4.7e-217 758.1 539 69.9
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 4.7e-217 758.1 539 69.6
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 6.1e-217 757.7 541 70.2
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 8.0e-217 757.3 540 71.3
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 1.4e-216 756.5 514 72.6
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 6.8e-216 754.2 551 71.5
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 6.8e-216 754.2 480 76.5
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 8.8e-216 753.8 556 68.9
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 2.0e-215 752.7 493 75.9
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 2.0e-215 752.7 527 71.5
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 2.6e-215 752.3 523 71.9
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 4.4e-215 751.5 511 74.4
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.7e-215 751.1 539 70.5
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 2.2e-214 749.2 457 79.4
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 2.8e-214 748.8 506 73.7
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 3.7e-214 748.4 541 70.2
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 6.3e-214 747.7 548 70.3
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 1.1e-213 746.9 503 72.0
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 1.8e-213 746.1 549 70.5
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 2.4e-213 745.7 519 70.9
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 3.1e-213 745.3 481 75.5
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 4.1e-213 745.0 535 71.0
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 2.0e-212 742.7 502 73.3
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 7.7e-212 740.7 499 74.7
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 7.7e-212 740.7 535 70.7
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.3e-211 740.0 526 69.8
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 1.3e-211 740.0 457 78.6
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 1.7e-211 739.6 549 68.9
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 2.9e-211 738.8 543 68.9
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 5.0e-211 738.0 513 71.5
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 8.6e-211 737.3 541 69.7
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 1.1e-210 736.9 488 73.8
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 1.5e-210 736.5 547 68.7
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 1.5e-210 736.5 543 70.0
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 1.9e-210 736.1 562 67.6
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 2.5e-210 735.7 484 75.6
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 2.5e-210 735.7 540 69.4
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 2.8e-209 732.3 539 69.4
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 4.7e-209 731.5 552 68.5
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 8.0e-209 730.7 499 71.5
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 1.0e-208 730.3 543 70.2
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 1.4e-208 729.9 531 70.2
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 4.0e-208 728.4 500 73.0
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.5e-207 726.5 471 75.8
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 3.4e-207 725.3 538 69.3
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 2.2e-206 722.6 533 69.4
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 2.8e-206 722.2 538 68.0
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 4.9e-206 721.5 523 69.2
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 6.3e-206 721.1 443 77.9
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 1.1e-205 720.3 538 67.7
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 1.4e-205 719.9 542 67.2
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 1.8e-205 719.5 443 77.7
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 1.8e-205 719.5 525 68.6
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 2.4e-205 719.2 510 72.4
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 4.1e-205 718.4 443 77.4
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 5.4e-205 718.0 530 67.9
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 9.2e-205 717.2 509 70.9
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 9.2e-205 717.2 559 66.4
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 4.5e-204 714.9 484 73.1
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.3e-203 713.4 524 69.7
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 3.8e-203 711.8 530 67.9
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 8.6e-203 710.7 451 76.9
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.5e-202 709.1 506 69.8
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 2.5e-202 709.1 482 72.4
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 2.1e-201 706.1 491 71.5
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 2.8e-201 705.7 487 71.9
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 4.7e-201 704.9 471 74.3
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 6.1e-201 704.5 485 73.6
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.5e-199 699.9 505 68.9
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 2.0e-199 699.5 426 78.2
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 5.4e-197 691.4 638 59.1
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 4.3e-178 628.6 542 63.1
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.6e-177 626.7 371 80.3
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 3.8e-174 615.5 412 72.6
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 2.7e-172 609.4 468 64.1
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 2.4e-157 559.7 375 74.9
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 3.2e-157 559.3 508 56.7
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 5.6e-154 548.5 397 70.0
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 2.8e-153 546.2 440 59.8
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.1e-152 544.3 423 68.3
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 1.3e-142 510.8 435 57.0
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.8e-136 490.3 472 54.0
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 3.5e-111 406.4 474 45.1
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 4.5e-111 406.0 534 46.8
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 8.5e-110 401.7 537 46.7
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 3.2e-109 399.8 541 45.7
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 7.5e-106 388.7 437 50.6
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 1.7e-105 387.5 517 43.5
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.4e-104 383.6 547 45.5
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 1.7e-102 377.5 479 44.3
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.1e-100 370.5 252 72.6
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 6.8e-99 365.5 441 47.6
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 6.3e-97 359.0 517 44.9
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 1.1e-80 305.1 176 81.8
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 2.0e-79 300.8 513 37.6
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 1.7e-73 281.2 169 79.9
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 1.3e-46 191.8 169 62.7
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 1.4e-40 171.8 151 58.3
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 6.7e-38 162.9 137 59.9
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.1e-37 162.2 131 64.1
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 4.3e-29 133.7 73 84.9
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 6.2e-28 129.8 105 60.0
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.0e-25 122.5 141 44.7
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 6.7e-22 109.8 104 60.6
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.5e-17 93.2 58 75.9
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 3.1e-11 74.3 128 46.1
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 4.5e-10 70.5 119 40.3
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.4e-08 65.5 119 37.8
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 1.2e-07 62.4 84 47.6
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 4.7e-07 60.5 37 75.7


User provided reference genes

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