Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0011531 Helianthus annuus HOM05D008452 ORTHO05D010294 4.6e-198 694.5 389 100.0
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 2.2e-192 675.6 389 97.4
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 6.5e-192 674.1 389 97.2
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 2.5e-191 672.2 389 96.9
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 2.3e-189 665.6 389 96.1
HanXRQChr13g0403321 Helianthus annuus HOM05D008452 ORTHO05D010294 9.0e-93 344.7 217 84.8
HanXRQChr09g0253291 Helianthus annuus HOM05D008452 ORTHO05D000233 5.1e-88 328.9 177 96.6
HanXRQChr13g0403311 Helianthus annuus HOM05D008452 ORTHO05D000233 1.6e-73 280.8 151 96.0
HanXRQChr04g0119771 Helianthus annuus HOM05D008452 ORTHO05D010294 1.7e-70 270.8 143 97.2
Lsat_1_v5_gn_3_84721 Lactuca sativa HOM05D008452 ORTHO05D010294 5.1e-64 249.2 387 42.9
HanXRQChr09g0243031 Helianthus annuus HOM05D008452 ORTHO05D010294 3.8e-59 233.0 116 100.0
HanXRQChr09g0253301 Helianthus annuus HOM05D008452 ORTHO05D010294 3.8e-59 233.0 116 100.0
HanXRQChr10g0300491 Helianthus annuus HOM05D008452 ORTHO05D010294 1.2e-57 228.0 116 97.4
HanXRQChr13g0402781 Helianthus annuus HOM05D008452 ORTHO05D010294 1.2e-57 228.0 116 97.4
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 1.2e-52 211.5 383 37.9
Lsat_1_v5_gn_5_25601 Lactuca sativa HOM05D008452 ORTHO05D010294 2.2e-51 207.2 367 38.4
Lsat_1_v5_gn_9_89720 Lactuca sativa HOM05D008452 ORTHO05D010294 1.5e-42 177.9 334 38.3
HanXRQChr03g0067131 Helianthus annuus HOM05D008452 ORTHO05D010294 1.5e-39 167.9 121 76.9
Lsat_1_v5_gn_5_147380 Lactuca sativa HOM05D008452 ORTHO05D010294 6.3e-38 162.5 312 37.2
HanXRQChr09g0267711 Helianthus annuus HOM05D008452 ORTHO05D010294 5.9e-36 156.0 113 96.5
Lsat_1_v5_gn_8_116720 Lactuca sativa HOM05D008452 ORTHO05D010294 1.0e-35 155.2 347 34.3
Lsat_1_v5_gn_2_71801 Lactuca sativa HOM05D008452 ORTHO05D010294 3.3e-34 150.2 154 53.9
Lsat_1_v5_gn_3_124700 Lactuca sativa HOM05D008452 ORTHO05D010294 6.8e-32 142.5 320 35.3
HanXRQChr17g0556091 Helianthus annuus HOM05D008452 ORTHO05D010294 1.5e-31 141.4 107 87.9
Lsat_1_v5_gn_6_60260 Lactuca sativa HOM05D008452 ORTHO05D010294 1.3e-30 138.3 147 54.4
Lsat_1_v5_gn_8_10480 Lactuca sativa HOM05D008452 ORTHO05D010294 5.9e-28 129.4 386 31.3
Lsat_1_v5_gn_4_171061 Lactuca sativa HOM05D008452 ORTHO05D010294 1.3e-27 128.3 154 49.4
HanXRQChr09g0243041 Helianthus annuus HOM05D008452 ORTHO05D010294 3.3e-26 123.6 68 95.6
Lsat_1_v5_gn_1_115440 Lactuca sativa HOM05D008452 ORTHO05D010294 1.4e-24 118.2 120 53.3
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 3.1e-24 117.1 346 34.1
Lsat_1_v5_gn_3_12080 Lactuca sativa HOM05D008452 ORTHO05D010294 9.8e-23 112.1 326 30.4
Lsat_1_v5_gn_9_95401 Lactuca sativa HOM05D008452 ORTHO05D010294 3.7e-22 110.2 125 50.4
HanXRQChr13g0402791 Helianthus annuus HOM05D008452 ORTHO05D010294 1.9e-21 107.8 89 70.8
Lsat_1_v5_gn_9_86220 Lactuca sativa HOM05D008452 ORTHO05D010294 4.3e-18 96.7 105 52.4
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 1.2e-17 95.1 346 27.5
Lsat_1_v5_gn_3_20121 Lactuca sativa HOM05D008452 ORTHO05D010294 1.8e-16 91.3 105 49.5
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 3.1e-16 90.5 346 26.6
Lsat_1_v5_gn_9_54600 Lactuca sativa HOM05D008452 ORTHO05D010294 3.4e-15 87.0 121 41.3
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 5.8e-15 86.3 347 27.4
PSO210G5528 Papaver somniferum HOM05D010879 ORTHO05D010294 1.9e-13 81.3 155 33.5
Lsat_1_v5_gn_9_84621 Lactuca sativa HOM05D008452 ORTHO05D010294 2.4e-13 80.9 153 40.5
PSO349G0027 Papaver somniferum HOM05D010375 ORTHO05D000233 2.1e-12 77.8 118 35.6
PSO724G0047 Papaver somniferum HOM05D010375 ORTHO05D000233 2.1e-12 77.8 118 35.6
PSO724G0607 Papaver somniferum HOM05D010375 ORTHO05D000233 2.1e-12 77.8 118 35.6
PSO528G0157 Papaver somniferum HOM05D010879 ORTHO05D010294 1.3e-11 75.1 188 30.3
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 5.1e-11 73.2 350 23.4
PSO675G2209 Papaver somniferum HOM05D010375 ORTHO05D000233 6.6e-11 72.8 110 34.5
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 6.6e-11 72.8 351 27.1
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.3e-10 70.1 350 24.3
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-10 70.1 374 23.5
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-10 69.7 357 25.5
PSO063G4994 Papaver somniferum HOM05D010375 ORTHO05D000233 7.3e-10 69.3 75 41.3
PSO675G7919 Papaver somniferum HOM05D010879 ORTHO05D010294 7.3e-10 69.3 150 28.7
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.5e-10 68.9 120 33.3
PSO017G7209 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO063G2271 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO210G4529 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO223G0075 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO339G0939 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO339G6517 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO384G2643 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO423G0281 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO675G4514 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO675G8923 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO724G0648 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO761G0148 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO781G0306 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO832G0405 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
PSO832G1619 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-09 68.6 151 29.8
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 6.2e-09 66.2 350 24.9
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 8.1e-09 65.9 119 30.3
Lj2g0002143 Lotus japonicus HOM05D002644 ORTHO05D003267 8.1e-09 65.9 176 32.4
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.1e-08 65.5 343 23.3
RcHm_v2.0_Chr1g0318231 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-08 65.5 364 28.0
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-08 65.5 78 43.6
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-08 65.5 350 24.9
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-08 64.7 353 25.5
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-08 64.3 355 25.1
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 3.1e-08 63.9 352 24.1
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 3.1e-08 63.9 352 24.1
Hma1.2p1_1437F.1_g283240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.0e-08 63.5 120 31.7
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 6.8e-08 62.8 372 21.5
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.9e-08 62.4 344 25.3
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 1.5e-07 61.6 378 23.8
PSO675G2505 Papaver somniferum HOM05D010375 ORTHO05D000233 2.6e-07 60.8 73 39.7
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 4.4e-07 60.1 82 41.5
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 4.4e-07 60.1 82 40.2
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 4.4e-07 60.1 78 41.0
Ciclev10023560m.g Citrus clementina HOM05D000539 ORTHO05D000233 5.8e-07 59.7 78 38.5
Ciclev10024249m.g Citrus clementina HOM05D000539 ORTHO05D000233 5.8e-07 59.7 78 38.5
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 5.8e-07 59.7 78 42.3
FAN12G1860 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.8e-07 59.7 104 36.5
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.8e-07 59.7 359 23.4
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 5.8e-07 59.7 385 24.2
TPR.G687 Trifolium pratense HOM05D007793 ORTHO05D010104 5.8e-07 59.7 86 41.9
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.6e-07 59.3 359 23.1
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 7.6e-07 59.3 78 41.0
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 9.9e-07 58.9 81 42.0
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 9.9e-07 58.9 367 22.9
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 9.9e-07 58.9 77 41.6
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 9.9e-07 58.9 367 25.1
TPR.G11532 Trifolium pratense HOM05D007793 ORTHO05D010104 9.9e-07 58.9 77 39.0
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 58.5 359 23.4
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 58.5 359 23.1
Psat5g276440 Pisum sativum HOM05D007793 ORTHO05D000636 1.7e-06 58.2 77 39.0
RcHm_v2.0_Chr2g0160781 Rosa chinensis HOM05D000539 ORTHO05D010294 1.7e-06 58.2 77 40.3
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 58.2 77 40.3
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 58.2 77 40.3
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.9e-06 57.4 359 23.4
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 2.9e-06 57.4 77 40.3
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 3.7e-06 57.0 109 34.9
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 57.0 359 23.1
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 4.9e-06 56.6 141 30.5
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.9e-06 56.6 359 23.1
MBI11_g23345_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 4.9e-06 56.6 83 39.8
RcHm_v2.0_Chr5g0072991 Rosa chinensis HOM05D000539 ORTHO05D000592 4.9e-06 56.6 73 42.5
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.4e-06 56.2 360 22.8
FAN22G0175 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.4e-06 55.8 102 35.3
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.4e-06 55.8 359 23.1
RcHm_v2.0_Chr6g0272451 Rosa chinensis HOM05D000539 ORTHO05D000592 8.4e-06 55.8 96 36.5


User provided reference genes

Program Settings