Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 3.9e-196 688.0 352 100.0
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 2.1e-165 585.9 346 86.1
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 4.7e-165 584.7 353 80.7
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.8e-161 572.8 355 78.0
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 5.9e-160 567.8 352 79.0
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.2e-158 562.0 352 76.4
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 6.1e-157 557.8 352 75.9
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 8.8e-156 553.9 352 79.3
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 3.4e-155 552.0 352 77.8
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 4.4e-155 551.6 354 75.7
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 7.5e-155 550.8 352 78.7
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.7e-154 549.7 356 74.4
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.7e-154 549.7 352 75.6
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 4.9e-154 548.1 354 74.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.1e-153 547.0 352 77.8
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.8e-153 546.2 359 77.2
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 5.4e-153 544.7 353 75.1
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 5.4e-153 544.7 352 74.7
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 9.1e-153 543.9 361 73.1
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.6e-152 543.1 352 73.0
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 3.5e-152 542.0 352 76.4
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.0e-151 540.4 352 74.4
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-151 539.3 353 76.5
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 2.3e-151 539.3 352 73.0
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.8e-151 538.5 352 72.7
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 6.6e-151 537.7 355 75.2
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 6.6e-151 537.7 356 74.4
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 2.5e-150 535.8 352 71.9
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 2.5e-150 535.8 352 71.9
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.5e-150 535.8 352 71.9
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.5e-150 535.8 352 73.6
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 4.2e-150 535.0 361 71.2
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 4.2e-150 535.0 352 73.6
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 5.6e-150 534.6 361 71.2
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 5.6e-150 534.6 353 72.0
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 7.2e-150 534.3 365 74.5
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 9.5e-150 533.9 354 74.0
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.6e-149 533.1 354 74.3
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 4.7e-149 531.6 360 70.6
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 4.7e-149 531.6 358 73.5
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 6.1e-149 531.2 353 71.4
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 8.0e-149 530.8 352 73.9
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 8.0e-149 530.8 352 71.0
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 1.0e-148 530.4 360 70.8
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.0e-148 530.4 352 74.7
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.0e-148 530.4 353 74.8
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 1.8e-148 529.6 352 74.4
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.0e-148 528.9 352 71.0
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 4.0e-148 528.5 355 71.8
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 4.0e-148 528.5 353 73.1
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.0e-148 528.5 352 73.0
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 5.2e-148 528.1 356 75.6
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.9e-148 527.3 352 72.7
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 8.9e-148 527.3 352 69.9
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.2e-147 526.9 352 74.1
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 1.2e-147 526.9 353 72.2
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 2.0e-147 526.2 352 71.3
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.4e-147 525.4 353 72.2
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 5.7e-147 524.6 355 71.3
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.3e-146 523.5 357 74.5
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 1.3e-146 523.5 360 73.1
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.3e-146 523.5 360 69.7
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.7e-146 523.1 352 69.6
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.9e-146 522.3 355 71.0
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 6.4e-146 521.2 353 73.9
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 6.4e-146 521.2 353 71.1
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 8.3e-146 520.8 363 72.5
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 8.3e-146 520.8 353 71.1
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.4e-145 520.0 355 70.4
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 1.4e-145 520.0 353 70.0
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.8e-145 519.6 355 70.1
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 3.2e-145 518.8 352 70.7
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 4.1e-145 518.5 352 70.2
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.1e-145 518.5 355 70.1
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 5.4e-145 518.1 352 69.3
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 9.2e-145 517.3 354 68.4
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.2e-144 516.9 352 70.5
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.2e-144 516.9 355 70.1
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 3.5e-144 515.4 352 70.7
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 5.9e-144 514.6 352 71.6
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 5.9e-144 514.6 355 71.3
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 7.8e-144 514.2 364 67.6
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 1.3e-143 513.5 355 68.5
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.9e-143 512.3 360 68.6
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 5.0e-143 511.5 355 72.7
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.1e-142 510.4 355 71.0
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 1.1e-142 510.4 356 69.7
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.5e-142 509.2 352 68.2
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 2.5e-142 509.2 355 71.0
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 5.6e-142 508.1 356 71.1
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 1.2e-141 506.9 357 70.3
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.1e-141 506.1 360 71.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.1e-141 506.1 352 67.9
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 4.7e-141 505.0 360 70.6
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 4.7e-141 505.0 355 71.5
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 4.7e-141 505.0 361 69.3
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.0e-140 503.8 355 70.1
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.4e-140 503.4 352 67.6
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 2.0e-139 499.6 358 70.4
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 7.5e-139 497.7 395 62.5
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 6.4e-138 494.6 352 66.8
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.4e-138 494.6 352 68.5
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.9e-137 493.0 352 68.5
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 2.7e-136 489.2 358 69.6
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 3.5e-136 488.8 333 69.1
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.0e-135 487.3 364 64.8
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.7e-135 486.5 348 68.1
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.3e-135 486.1 353 64.6
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 3.0e-135 485.7 359 65.7
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 5.0e-135 485.0 355 65.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 5.0e-135 485.0 352 68.5
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 5.0e-135 485.0 353 68.8
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.5e-134 483.4 354 66.4
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.6e-134 481.5 355 67.0
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 4.7e-133 478.4 359 66.6
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 8.9e-132 474.2 353 65.2
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 7.5e-131 471.1 352 65.3
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 2.2e-130 469.5 356 63.2
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 8.3e-130 467.6 352 62.8
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.2e-128 463.8 356 64.0
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.1e-128 463.0 357 63.0
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 2.3e-127 459.5 358 61.7
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 2.3e-127 459.5 361 61.8
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 2.5e-126 456.1 353 63.2
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 1.2e-125 453.8 337 65.9
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.8e-125 452.6 352 63.1
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.1e-124 450.7 353 62.3
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 1.8e-124 449.9 357 60.8
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.5e-123 446.8 355 60.8
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.3e-119 433.0 301 71.4
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.2e-117 427.2 289 71.3
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 6.8e-116 421.4 353 63.2
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.9e-105 386.7 275 75.6
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 3.5e-104 382.5 310 61.9
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.7e-103 380.2 295 62.4
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 8.7e-103 377.9 352 56.0
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.9e-98 362.8 327 57.8
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.2e-73 279.3 278 51.8
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.2e-73 278.5 212 67.5
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.4e-71 274.2 356 41.0
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.2e-67 261.2 246 58.9
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 5.7e-62 242.3 352 37.8
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.8e-61 240.0 358 39.1
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.2e-61 238.4 156 69.2
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.2e-57 226.5 175 66.9
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.6e-56 224.2 115 90.4
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.7e-53 213.0 126 79.4
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.3e-52 209.1 123 78.0
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 1.1e-41 174.9 138 64.5
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.5e-35 152.9 206 43.2
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.5e-33 147.1 85 72.9
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.3e-33 146.4 85 71.8
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.6e-33 146.0 85 71.8
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 1.4e-31 141.4 132 63.6
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.0e-31 140.2 85 69.4
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 5.7e-30 136.0 186 39.8
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.7e-29 134.4 106 66.0
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.5e-25 121.3 187 40.6
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 6.8e-23 112.5 59 88.1
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 6.8e-23 112.5 59 88.1
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 8.9e-23 112.1 63 84.1
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 6.4e-21 105.9 64 78.1
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.9e-20 104.4 58 84.5
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 4.6e-19 99.8 143 36.4
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.7e-18 97.8 56 80.4
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.9e-17 94.4 75 58.7
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 3.3e-17 93.6 55 78.2
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-16 91.7 59 69.5
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-15 87.4 80 56.2
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 9.8e-14 82.0 149 31.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 6.4e-13 79.3 49 71.4
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.4e-13 79.3 37 81.1
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 6.4e-13 79.3 76 48.7
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 7.8e-11 72.4 62 53.2
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.9e-09 67.8 82 41.5
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.6e-08 63.5 50 56.0
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 6.2e-08 62.8 49 61.2
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 8.1e-08 62.4 53 49.1
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 1.8e-07 61.2 158 27.2
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 5.8e-06 56.2 179 25.7


User provided reference genes

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