Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 1.2e-75 286.6 157 100.0
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 7.9e-40 167.5 163 62.0
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.9e-33 146.4 161 64.0
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 3.0e-23 112.5 164 46.3
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 5.2e-23 111.7 164 44.5
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 2.6e-22 109.4 136 51.5
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 5.7e-22 108.2 121 53.7
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 5.7e-22 108.2 134 47.8
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 5.7e-22 108.2 105 59.0
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 5.7e-22 108.2 105 59.0
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 2.8e-21 105.9 108 58.3
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 3.7e-21 105.5 165 47.3
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 6.3e-21 104.8 139 50.4
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 4.1e-20 102.1 169 45.6
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 7.0e-20 101.3 88 64.8
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 7.0e-20 101.3 93 60.2
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.2e-19 100.5 97 56.7
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.2e-19 100.5 97 56.7
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 1.2e-19 100.5 109 53.2
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 2.0e-19 99.8 133 48.1
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 2.0e-19 99.8 169 47.9
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 2.0e-19 99.8 169 47.9
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 2.0e-19 99.8 169 47.9
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 2.7e-19 99.4 100 62.0
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.5e-19 99.0 93 58.1
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.5e-19 99.0 93 58.1
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 5.9e-19 98.2 115 54.8
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 7.7e-19 97.8 144 45.1
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 7.7e-19 97.8 113 54.9
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 1.7e-18 96.7 158 43.7
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 2.3e-18 96.3 103 58.3
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 2.9e-18 95.9 133 47.4
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.9e-18 95.9 105 53.3
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 3.8e-18 95.5 162 43.2
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 5.0e-18 95.1 159 44.0
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 8.6e-18 94.4 111 55.0
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.5e-17 93.6 101 56.4
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.9e-17 93.2 122 49.2
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.9e-17 93.2 164 46.3
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 1.9e-17 93.2 105 52.4
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 3.3e-17 92.4 92 57.6
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 4.2e-17 92.0 150 44.0
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 5.5e-17 91.7 119 44.5
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 7.2e-17 91.3 108 55.6
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 9.5e-17 90.9 96 62.5
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 9.5e-17 90.9 166 43.4
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.2e-16 90.5 104 50.0
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 1.2e-16 90.5 125 53.6
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 2.1e-16 89.7 165 41.8
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 2.1e-16 89.7 107 48.6
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.8e-16 89.4 88 55.7
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 2.8e-16 89.4 107 53.3
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 3.6e-16 89.0 108 48.1
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 3.6e-16 89.0 105 46.7
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 3.6e-16 89.0 155 42.6
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 6.1e-16 88.2 107 46.7
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 6.1e-16 88.2 108 54.6
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 8.0e-16 87.8 108 57.4
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.0e-15 87.4 104 52.9
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 1.4e-15 87.0 97 52.6
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 1.4e-15 87.0 196 37.2
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.8e-15 86.7 155 48.4
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 1.8e-15 86.7 80 60.0
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.3e-15 86.3 123 43.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 2.3e-15 86.3 166 41.0
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 3.0e-15 85.9 106 53.8
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 3.0e-15 85.9 157 40.1
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 4.0e-15 85.5 94 50.0
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 4.0e-15 85.5 166 41.0
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 4.0e-15 85.5 166 41.0
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 4.0e-15 85.5 80 58.8
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 6.8e-15 84.7 125 44.8
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 8.9e-15 84.3 105 51.4
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 8.9e-15 84.3 102 50.0
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 8.9e-15 84.3 94 60.6
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.2e-14 84.0 102 49.0
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.5e-14 83.6 107 52.3
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 2.0e-14 83.2 194 39.2
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 3.4e-14 82.4 105 52.4
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 3.4e-14 82.4 107 51.4
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 4.4e-14 82.0 89 62.9
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 4.4e-14 82.0 77 59.7
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 4.4e-14 82.0 77 58.4
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.3e-13 80.5 153 46.4
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 2.8e-13 79.3 87 56.3
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 3.7e-13 79.0 71 60.6
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 4.9e-13 78.6 88 59.1
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 2.4e-12 76.3 75 62.7
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 9.2e-12 74.3 68 57.4
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 2.0e-11 73.2 148 39.9
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.5e-11 72.4 115 46.1
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 7.8e-11 71.2 149 42.3
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 3.8e-10 68.9 78 50.0
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 8.6e-10 67.8 58 58.6
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.9e-09 66.6 53 67.9
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 3.3e-09 65.9 147 40.1
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 5.6e-09 65.1 154 37.0
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 1.6e-08 63.5 87 44.8
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 8.0e-08 61.2 49 65.3
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 4.0e-07 58.9 124 42.7
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 4.0e-07 58.9 45 66.7
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 4.0e-07 58.9 45 66.7
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 4.0e-07 58.9 45 66.7
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 5.2e-07 58.5 98 35.7
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 5.2e-07 58.5 74 50.0


User provided reference genes

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