Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0010171 Helianthus annuus HOM05D000355 ORTHO05D000227 6.4e-91 337.4 174 100.0
Lsat_1_v5_gn_5_165660 Lactuca sativa HOM05D000355 ORTHO05D000227 1.4e-56 223.4 169 73.4
ECA248G0772 Erigeron canadensis HOM05D000355 ORTHO05D000227 5.3e-53 211.5 174 70.7
HanXRQChr13g0390171 Helianthus annuus HOM05D000355 ORTHO05D000227 1.8e-45 186.4 174 65.5
Actinidia07916 Actinidia chinensis HOM05D000355 ORTHO05D000227 1.2e-33 147.1 162 53.7
CSS0014070 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 9.8e-31 137.5 163 54.6
CSS0037359 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 9.8e-31 137.5 163 54.6
PGSC0003DMG400008941 Solanum tuberosum HOM05D000355 ORTHO05D000227 2.2e-30 136.3 172 49.4
Dinv21173 Davidia involucrata HOM05D000355 ORTHO05D000227 2.8e-30 136.0 163 54.0
Dinv31715 Davidia involucrata HOM05D000355 ORTHO05D000227 2.8e-30 136.0 163 52.8
Cc06_g06130 Coffea canephora HOM05D000355 ORTHO05D000227 6.3e-30 134.8 174 50.0
Sopen09g004880 Solanum pennellii HOM05D000355 ORTHO05D000227 6.3e-30 134.8 172 49.4
Solyc09g010140.3 Solanum lycopersicum HOM05D000355 ORTHO05D000227 1.4e-29 133.7 172 48.8
Nitab4.5_0001875g0060 Nicotiana tabacum HOM05D000355 ORTHO05D000227 5.4e-29 131.7 169 52.1
Nitab4.5_0009390g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.7e-28 129.4 172 50.6
Nitab4.5_0001933g0070 Nicotiana tabacum HOM05D000355 ORTHO05D000227 3.5e-28 129.0 172 50.0
DCAR_013411 Daucus carota HOM05D000355 ORTHO05D000227 5.9e-28 128.3 169 53.8
Oeu010769.1 Olea europaea HOM05D000355 ORTHO05D000227 2.3e-27 126.3 166 49.4
Hma1.2p1_0820F.1_g223991 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 7.2e-26 121.3 160 51.9
Hma1.2p1_0820F.1_g224010 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 7.2e-26 121.3 160 51.9
CAN.G841.17 Capsicum annuum HOM05D000355 ORTHO05D000227 1.2e-25 120.6 167 49.1
Sopen10g032740 Solanum pennellii HOM05D000355 ORTHO05D000227 1.2e-25 120.6 178 50.0
MSTRG.26626 Avicennia marina HOM05D000355 ORTHO05D000227 2.1e-25 119.8 157 47.8
SalBow5G1208 Salvia bowleyana HOM05D000355 ORTHO05D000227 4.7e-25 118.6 159 49.1
PGSC0003DMG400028250 Solanum tuberosum HOM05D000355 ORTHO05D000227 1.0e-24 117.5 177 49.2
Migut.L01800 Erythranthe guttata HOM05D000355 ORTHO05D000227 2.3e-24 116.3 160 47.5
Peaxi162Scf00096g00084 Petunia axillaris HOM05D000355 ORTHO05D000227 3.1e-21 105.9 153 46.4
TAR636G3066 Trochodendron aralioides HOM05D000355 ORTHO05D000227 1.9e-18 96.7 164 40.2
TAR633G1747 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.5e-18 96.3 166 41.6
Dinv22826 Davidia involucrata HOM05D000052 ORTHO05D001127 3.6e-17 92.4 164 42.1
PSO339G5944 Papaver somniferum HOM05D000355 ORTHO05D000227 1.0e-16 90.9 164 42.7
PSO801G0353 Papaver somniferum HOM05D000355 ORTHO05D000227 2.3e-16 89.7 165 43.6
SGA_v2.0_scaffold184G39985 Striga asiatica HOM05D000355 ORTHO05D000227 4.0e-16 89.0 154 44.2
CSS0023293 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 2.0e-15 86.7 166 42.2
AUR62006222 Chenopodium quinoa HOM05D000355 ORTHO05D000227 2.0e-15 86.7 153 43.1
Prupe.7G102100 Prunus persica HOM05D000355 ORTHO05D000227 2.2e-14 83.2 149 41.6
Sc02g0000430 Simmondsia chinensis HOM05D000355 ORTHO05D000227 6.4e-14 81.6 175 36.6
GSVIVG01033884001 Vitis vinifera HOM05D000355 ORTHO05D000227 6.4e-14 81.6 146 41.8
AUR62036996 Chenopodium quinoa HOM05D000355 ORTHO05D000227 1.1e-13 80.9 153 40.5
QL07p038276 Quercus lobata HOM05D000355 ORTHO05D000227 1.1e-13 80.9 161 39.1
Haze_19647 Corylus avellana HOM05D000355 ORTHO05D000227 1.4e-13 80.5 154 41.6
Dinv42536 Davidia involucrata HOM05D000355 ORTHO05D000227 1.4e-13 80.5 174 39.1
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 2.4e-13 79.7 148 37.8
AUR62020260 Chenopodium quinoa HOM05D000355 ORTHO05D000227 4.1e-13 79.0 146 43.2
Ah.08g210430 Amaranthus hybridus HOM05D000355 ORTHO05D000227 7.0e-13 78.2 153 40.5
Cfa016641 Carpinus fangiana HOM05D000355 ORTHO05D000227 9.2e-13 77.8 143 43.4
MBI17_g46127_MAGBIO Magnolia biondii HOM05D000355 ORTHO05D000227 9.2e-13 77.8 150 40.7
RcHm_v2.0_Chr3g0474691 Rosa chinensis HOM05D000355 ORTHO05D000227 9.2e-13 77.8 147 40.8
CANSAT54G1123 Cannabis sativa HOM05D000355 ORTHO05D000227 1.6e-12 77.0 172 36.0
Sed0022708 Sechium edule HOM05D000355 ORTHO05D000227 1.6e-12 77.0 169 39.6
TWI31G0922 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 1.6e-12 77.0 175 38.9
TWI75G0311 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 4.6e-12 75.5 181 36.5
Eucgr.J00504 Eucalyptus grandis HOM05D000355 ORTHO05D000227 7.8e-12 74.7 178 37.1
Actinidia07253 Actinidia chinensis HOM05D000355 ORTHO05D000227 1.0e-11 74.3 166 41.0
AUR62001523 Chenopodium quinoa HOM05D000355 ORTHO05D000227 1.0e-11 74.3 144 41.7
Duzib150G0738 Durio zibethinus HOM05D000355 ORTHO05D000227 1.3e-11 73.9 182 33.5
Duzib168G0847 Durio zibethinus HOM05D000355 ORTHO05D000227 1.3e-11 73.9 188 35.1
Lalb_Chr01g0018021 Lupinus albus HOM05D000355 ORTHO05D000227 1.3e-11 73.9 154 42.9
Aqoxy4G02729 Aquilegia oxysepala HOM05D000355 ORTHO05D000227 3.0e-11 72.8 158 36.7
CsaV3_1G014950 Cucumis sativus L. HOM05D000355 ORTHO05D000227 3.0e-11 72.8 169 37.9
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 3.0e-11 72.8 150 38.7
TWI74G0135 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 3.0e-11 72.8 149 41.6
ClCG01G012080 Citrullus lanatus HOM05D000355 ORTHO05D000227 6.6e-11 71.6 170 36.5
MELO3C004692.2 Cucumis melo HOM05D000355 ORTHO05D000227 6.6e-11 71.6 169 37.3
Manes.09G052900 Manihot esculenta HOM05D000355 ORTHO05D000227 6.6e-11 71.6 136 42.6
Thecc.05G094300 Theobroma cacao HOM05D000355 ORTHO05D000227 6.6e-11 71.6 143 42.0
EL10Ac7g16878 Beta vulgaris HOM05D000355 ORTHO05D000227 1.9e-10 70.1 148 37.8
Potri.016G076300 Populus trichocarpa HOM05D000355 ORTHO05D000227 2.5e-10 69.7 145 33.8
Sabra16G0079000 Salix brachista HOM05D000355 ORTHO05D000227 3.3e-10 69.3 145 40.0
Thecc.09G280300 Theobroma cacao HOM05D000355 ORTHO05D000227 3.3e-10 69.3 184 33.2
QL01p012022 Quercus lobata HOM05D000355 ORTHO05D000227 4.3e-10 68.9 187 33.7
MD14G1030000 Malus domestica HOM05D000355 ORTHO05D000227 5.6e-10 68.6 149 39.6
TWI79G1323 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 9.5e-10 67.8 185 35.1
EL10Ac7g16334 Beta vulgaris HOM05D000355 ORTHO05D000227 3.6e-09 65.9 151 37.7
PGR102G1031 Punica granatum HOM05D000355 ORTHO05D000227 3.6e-09 65.9 162 37.0
Sopen06g030700 Solanum pennellii HOM05D000355 ORTHO05D000227 3.6e-09 65.9 148 35.8
COL.COLO4_34022 Corchorus olitorius HOM05D000355 ORTHO05D000227 6.2e-09 65.1 187 32.6
CiPaw.10G012000 Carya illinoinensis HOM05D000355 ORTHO05D000227 8.0e-09 64.7 161 37.3
Duzib093G1640 Durio zibethinus HOM05D000355 ORTHO05D000227 8.0e-09 64.7 118 43.2
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 1.4e-08 63.9 148 35.1
ClCG10G018740 Citrullus lanatus HOM05D000355 ORTHO05D000227 2.3e-08 63.2 128 39.1
CsaV3_3G037490 Cucumis sativus L. HOM05D000355 ORTHO05D000227 2.3e-08 63.2 150 40.7
Nitab4.5_0003661g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.3e-08 63.2 152 37.5
CiPaw.03G275300 Carya illinoinensis HOM05D000355 ORTHO05D000227 6.8e-08 61.6 166 36.1
CAN.G397.83 Capsicum annuum HOM05D000355 ORTHO05D000227 8.9e-08 61.2 86 46.5
CAN.G919.34 Capsicum annuum HOM05D000355 ORTHO05D000227 8.9e-08 61.2 149 34.9
CiPaw.09G016700 Carya illinoinensis HOM05D000355 ORTHO05D000227 1.5e-07 60.5 150 36.0
COL.COLO4_03549 Corchorus olitorius HOM05D000355 ORTHO05D000227 2.0e-07 60.1 141 39.0
RcHm_v2.0_Chr5g0046711 Rosa chinensis HOM05D000355 ORTHO05D000227 2.0e-07 60.1 177 29.9
Ah.15g090800 Amaranthus hybridus HOM05D000355 ORTHO05D000227 2.6e-07 59.7 157 36.9
CiPaw.13G134300 Carya illinoinensis HOM05D000355 ORTHO05D000227 2.6e-07 59.7 174 32.8
FAN02G1600 Fragaria x ananassa HOM05D000355 ORTHO05D000227 2.6e-07 59.7 165 37.6
Ciclev10030109m.g Citrus clementina HOM05D000355 ORTHO05D000227 3.4e-07 59.3 168 32.1
Potri.006G209500 Populus trichocarpa HOM05D000355 ORTHO05D000227 3.4e-07 59.3 152 36.8
Sabra16G0081600 Salix brachista HOM05D000355 ORTHO05D000227 3.4e-07 59.3 147 36.7
Gohir.D09G096000 Gossypium hirsutum HOM05D000355 ORTHO05D000227 4.4e-07 58.9 181 30.4
Ca_09022_v3 Cicer arietinum L. HOM05D000355 ORTHO05D000227 5.8e-07 58.5 158 36.7
Haze_23357 Corylus avellana HOM05D000355 ORTHO05D000227 9.8e-07 57.8 187 33.7
Cfa009997 Carpinus fangiana HOM05D000355 ORTHO05D000227 1.3e-06 57.4 192 32.3
CiPaw.08G090300 Carya illinoinensis HOM05D000355 ORTHO05D000227 1.7e-06 57.0 161 34.8
Gorai.006G112700 Gossypium raimondii HOM05D000355 ORTHO05D000227 1.7e-06 57.0 179 29.1
Psat3g031640 Pisum sativum HOM05D000355 ORTHO05D000227 1.7e-06 57.0 148 38.5
FvH4_6g19420 Fragaria vesca HOM05D000355 ORTHO05D000227 2.2e-06 56.6 160 35.6
FAN14G4847 Fragaria x ananassa HOM05D000355 ORTHO05D000227 2.2e-06 56.6 160 35.6
TAR629G2272 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.2e-06 56.6 152 31.6
Gohir.A09G096300 Gossypium hirsutum HOM05D000355 ORTHO05D000227 3.7e-06 55.8 181 30.9
FAN09G4885 Fragaria x ananassa HOM05D000355 ORTHO05D000227 4.9e-06 55.5 160 36.2


User provided reference genes

Program Settings