Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0009931 Helianthus annuus HOM05D004691 ORTHO05D005552 1.1e-66 256.5 127 100.0
HanXRQChr08g0213401 Helianthus annuus HOM05D004691 ORTHO05D005552 3.5e-62 241.5 126 95.2
ECA248G3453 Erigeron canadensis HOM05D004691 ORTHO05D005552 4.6e-62 241.1 126 95.2
Lj2A1168T23 Lonicera japonica HOM05D004691 ORTHO05D005552 3.0e-61 238.4 127 92.1
Lj9A529T34 Lonicera japonica HOM05D004691 ORTHO05D005552 8.6e-61 236.9 127 91.3
Hma1.2p1_0667F.1_g199750 Hydrangea macrophylla HOM05D004691 ORTHO05D005552 1.5e-60 236.1 127 90.6
CSS0029439 Camellia sinensis var. sinensis HOM05D004691 ORTHO05D005552 3.3e-60 235.0 127 89.8
CANSAT25G2296 Cannabis sativa HOM05D004691 ORTHO05D005552 3.3e-60 235.0 127 86.6
Dinv34779 Davidia involucrata HOM05D004691 ORTHO05D005552 3.3e-60 235.0 127 89.8
Lsat_1_v5_gn_9_49380 Lactuca sativa HOM05D004691 ORTHO05D005552 5.6e-60 234.2 126 92.1
PGR119G1056 Punica granatum HOM05D004691 ORTHO05D005552 5.6e-60 234.2 127 88.2
PGR119G1812 Punica granatum HOM05D004691 ORTHO05D005552 5.6e-60 234.2 127 88.2
Thecc.01G274400 Theobroma cacao HOM05D004691 ORTHO05D005552 5.6e-60 234.2 127 89.0
Dinv32905 Davidia involucrata HOM05D004691 ORTHO05D005552 7.3e-60 233.8 127 90.6
EL10Ac4g08388 Beta vulgaris HOM05D004691 ORTHO05D005552 1.2e-59 233.0 126 88.9
PSO675G3171 Papaver somniferum HOM05D004691 ORTHO05D005552 1.2e-59 233.0 127 89.0
Cpa.g.sc52.60 Carica papaya HOM05D004691 ORTHO05D005552 2.8e-59 231.9 127 89.0
ClCG07G000390 Citrullus lanatus HOM05D004691 ORTHO05D005552 2.8e-59 231.9 127 87.4
PSO761G0020 Papaver somniferum HOM05D004691 ORTHO05D005552 2.8e-59 231.9 127 87.4
Sc17g0001280 Simmondsia chinensis HOM05D004691 ORTHO05D005552 2.8e-59 231.9 127 87.4
SGA_v2.0_scaffold96G29067 Striga asiatica HOM05D004691 ORTHO05D005552 2.8e-59 231.9 126 88.9
Manes.05G079200 Manihot esculenta HOM05D004691 ORTHO05D005552 3.6e-59 231.5 127 87.4
PSO017G2306 Papaver somniferum HOM05D004691 ORTHO05D005552 3.6e-59 231.5 127 88.2
Peaxi162Scf00408g00833 Petunia axillaris HOM05D004691 ORTHO05D005552 3.6e-59 231.5 126 88.1
Solyc08g075850.3 Solanum lycopersicum HOM05D004691 ORTHO05D005552 4.7e-59 231.1 127 87.4
Sopen08g024490 Solanum pennellii HOM05D004691 ORTHO05D005552 4.7e-59 231.1 127 87.4
PGSC0003DMG400030873 Solanum tuberosum HOM05D004691 ORTHO05D005552 4.7e-59 231.1 127 87.4
CiPaw.08G107800 Carya illinoinensis HOM05D004691 ORTHO05D005552 6.2e-59 230.7 127 88.2
Lalb_Chr06g0162871 Lupinus albus HOM05D004691 ORTHO05D005552 6.2e-59 230.7 127 88.2
Cc08_g05170 Coffea canephora HOM05D004691 ORTHO05D005552 8.1e-59 230.3 127 86.6
TPR.G11285 Trifolium pratense HOM05D004691 ORTHO05D005552 8.1e-59 230.3 127 85.8
Cfa006171 Carpinus fangiana HOM05D004691 ORTHO05D005552 1.1e-58 229.9 127 87.4
Ca_01504_v3 Cicer arietinum L. HOM05D004691 ORTHO05D005552 1.1e-58 229.9 127 85.0
FvH4_2g23200 Fragaria vesca HOM05D004691 ORTHO05D005552 1.1e-58 229.9 127 86.6
RcHm_v2.0_Chr6g0290451 Rosa chinensis HOM05D004691 ORTHO05D005552 1.1e-58 229.9 127 86.6
FAN24G2920 Fragaria x ananassa HOM05D004691 ORTHO05D005552 1.4e-58 229.6 127 86.6
Nitab4.5_0000108g0400 Nicotiana tabacum HOM05D004691 ORTHO05D005552 1.4e-58 229.6 126 88.9
Hund12255 Selenicereus undatus HOM05D004691 ORTHO05D005552 1.4e-58 229.6 127 88.2
TAR260G0003 Trochodendron aralioides HOM05D004691 ORTHO05D005552 1.4e-58 229.6 127 85.8
Lj3A731T61 Lonicera japonica HOM05D004691 ORTHO05D005552 1.8e-58 229.2 127 86.6
Migut.A00557 Erythranthe guttata HOM05D004691 ORTHO05D005552 2.4e-58 228.8 127 87.4
VMungo0647G0910 Vigna mungo HOM05D004691 ORTHO05D005552 2.4e-58 228.8 126 86.5
Potri.004G062600 Populus trichocarpa HOM05D004691 ORTHO05D005552 3.1e-58 228.4 127 85.8
Rhsim13G0027100 Rhododendron simsii HOM05D004691 ORTHO05D005552 3.1e-58 228.4 127 86.6
unitig_748.g8144 Utricularia gibba HOM05D004691 ORTHO05D005552 3.1e-58 228.4 127 86.6
Duzib138G0407 Durio zibethinus HOM05D004691 ORTHO05D005552 4.0e-58 228.0 127 85.8
FAN27G3192 Fragaria x ananassa HOM05D004691 ORTHO05D005552 4.0e-58 228.0 127 86.6
TWI18G0899 Tripterygium wilfordii HOM05D004691 ORTHO05D005552 4.0e-58 228.0 127 85.0
CANSAT80G0426 Cannabis sativa HOM05D004691 ORTHO05D005552 5.2e-58 227.6 127 83.5
Ciclev10022626m.g Citrus clementina HOM05D004691 ORTHO05D005552 5.2e-58 227.6 126 85.7
MD03G1261300 Malus domestica HOM05D004691 ORTHO05D005552 5.2e-58 227.6 127 86.6
Medtr1g047130 Medicago truncatula HOM05D004691 ORTHO05D005552 5.2e-58 227.6 127 84.3
COL.COLO4_11872 Corchorus olitorius HOM05D004691 ORTHO05D005552 6.8e-58 227.3 127 86.6
DCAR_002717 Daucus carota HOM05D004691 ORTHO05D005552 6.8e-58 227.3 127 87.4
MD11G1281700 Malus domestica HOM05D004691 ORTHO05D005552 6.8e-58 227.3 127 86.6
Gohir.D12G003600 Gossypium hirsutum HOM05D004691 ORTHO05D005552 8.9e-58 226.9 127 85.0
Gorai.008G003400 Gossypium raimondii HOM05D004691 ORTHO05D005552 8.9e-58 226.9 127 85.0
Eucgr.K03344 Eucalyptus grandis HOM05D004691 ORTHO05D005552 1.2e-57 226.5 127 84.3
Phvul.001G053600 Phaseolus vulgaris HOM05D004691 ORTHO05D005552 1.2e-57 226.5 126 84.9
Prupe.8G237600 Prunus persica HOM05D004691 ORTHO05D005552 1.2e-57 226.5 127 86.6
Prupe.1G577100 Prunus persica HOM05D004691 ORTHO05D005552 1.5e-57 226.1 127 85.8
TPR.G13465 Trifolium pratense HOM05D004691 ORTHO05D005552 1.5e-57 226.1 127 85.0
DCAR_018435 Daucus carota HOM05D004691 ORTHO05D005552 2.0e-57 225.7 127 85.8
Glyma.17G206800 Glycine max HOM05D004691 ORTHO05D005552 2.0e-57 225.7 126 84.9
PGSC0003DMG400017984 Solanum tuberosum HOM05D004691 ORTHO05D005552 2.0e-57 225.7 127 87.4
Glyma.07G180400 Glycine max HOM05D004691 ORTHO05D005552 2.6e-57 225.3 126 84.9
Phvul.001G054100 Phaseolus vulgaris HOM05D004691 ORTHO05D005552 2.6e-57 225.3 126 84.9
vmacro02596 Vaccinium macrocarpon HOM05D004691 ORTHO05D005552 2.6e-57 225.3 127 86.6
Nitab4.5_0003992g0020 Nicotiana tabacum HOM05D004691 ORTHO05D005552 3.4e-57 224.9 126 88.1
PSO210G7297 Papaver somniferum HOM05D004691 ORTHO05D005552 3.4e-57 224.9 127 84.3
Sabra04G0041500 Salix brachista HOM05D004691 ORTHO05D005552 3.4e-57 224.9 127 85.0
TWI75G0960 Tripterygium wilfordii HOM05D004691 ORTHO05D005552 3.4e-57 224.9 133 83.5
MELO3C014296.2 Cucumis melo HOM05D004691 ORTHO05D005552 4.4e-57 224.6 127 84.3
Gorai.007G138900 Gossypium raimondii HOM05D004691 ORTHO05D005552 4.4e-57 224.6 127 84.3
arahy.Tifrunner.gnm1.ann1.3Q9Y1V Arachis hypogaea HOM05D004691 ORTHO05D005552 7.6e-57 223.8 127 87.4
arahy.Tifrunner.gnm1.ann1.GXX04Y Arachis hypogaea HOM05D004691 ORTHO05D005552 7.6e-57 223.8 127 87.4
Lj1g0022890 Lotus japonicus HOM05D004691 ORTHO05D005552 7.6e-57 223.8 127 83.5
arahy.Tifrunner.gnm1.ann1.DJ1VY2 Arachis hypogaea HOM05D004691 ORTHO05D005552 9.9e-57 223.4 127 86.6
Aa31LG11G2940 Aethionema arabicum HOM05D004691 ORTHO05D005552 1.3e-56 223.0 126 85.7
Sed0017796 Sechium edule HOM05D004691 ORTHO05D005552 1.3e-56 223.0 127 85.0
Aqoxy5G00433 Aquilegia oxysepala HOM05D004691 ORTHO05D005552 2.2e-56 222.2 127 84.3
CDE04G1639 Ceratophyllum demersum HOM05D004691 ORTHO05D005552 2.9e-56 221.9 127 85.0
ATR0787G203 Amborella trichopoda HOM05D004691 ORTHO05D005552 3.8e-56 221.5 127 85.0
arahy.Tifrunner.gnm1.ann1.2S5JQC Arachis hypogaea HOM05D004691 ORTHO05D005552 3.8e-56 221.5 127 86.6
CsaV3_2G013570 Cucumis sativus L. HOM05D004691 ORTHO05D005552 3.8e-56 221.5 127 81.9
GSVIVG01001184001 Vitis vinifera HOM05D004691 ORTHO05D005552 3.8e-56 221.5 127 85.8
Thhalv10005052m.g Eutrema salsugineum HOM05D004691 ORTHO05D005552 8.4e-56 220.3 126 84.1
Gohir.D11G129800 Gossypium hirsutum HOM05D004691 ORTHO05D005552 8.4e-56 220.3 127 82.7
BcaB04g19862 Brassica carinata HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
BcaC04g23501 Brassica carinata HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
A06p34500 Brassica napus HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
A09p06900 Brassica napus HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
C07p44050 Brassica napus HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
C09p07630 Brassica napus HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
BolC9t53681H Brassica oleracea HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
BraA06t26378Z Brassica rapa HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
BraA09t36337Z Brassica rapa HOM05D004691 ORTHO05D005552 1.1e-55 219.9 126 84.1
BolC7t44929H Brassica oleracea HOM05D004691 ORTHO05D005552 1.4e-55 219.5 126 83.3
EL10Ac4g08386 Beta vulgaris HOM05D004691 ORTHO05D005552 1.9e-55 219.2 152 73.0
SalBow4G0422 Salvia bowleyana HOM05D004691 ORTHO05D005552 1.9e-55 219.2 135 79.3
AL6G34810 Arabidopsis lyrata HOM05D004691 ORTHO05D005552 4.1e-55 218.0 126 83.3
AT5G23535 Arabidopsis thaliana HOM05D004691 ORTHO05D005552 4.1e-55 218.0 126 83.3
Sp2g23660 Schrenkiella parvula HOM05D004691 ORTHO05D005552 4.1e-55 218.0 126 83.3
THA.LOC104823041 Tarenaya hassleriana HOM05D004691 ORTHO05D005552 7.1e-55 217.2 126 83.3
CARHR189990 Cardamine hirsuta HOM05D004691 ORTHO05D005552 9.2e-55 216.9 126 82.5
Lsat_1_v5_gn_5_187201 Lactuca sativa HOM05D004691 ORTHO05D005552 9.2e-55 216.9 120 91.7
SGA_v2.0_scaffold89G27398 Striga asiatica HOM05D004691 ORTHO05D005552 9.2e-55 216.9 129 84.5
EL10Ac2g03130 Beta vulgaris HOM05D004691 ORTHO05D005552 1.2e-54 216.5 152 73.0
AL4G15050 Arabidopsis lyrata HOM05D004691 ORTHO05D005552 2.1e-54 215.7 126 82.5
Carub.0006s2131 Capsella rubella HOM05D004691 ORTHO05D005552 2.1e-54 215.7 126 82.5
Sed0022085 Sechium edule HOM05D004691 ORTHO05D005552 6.0e-54 214.2 153 71.9
Ah.10g032130 Amaranthus hybridus HOM05D004691 ORTHO05D005552 7.8e-54 213.8 149 71.8
AUR62018176 Chenopodium quinoa HOM05D004691 ORTHO05D005552 3.0e-53 211.8 137 78.1
Zm00001eb196350 Zea mays HOM05D004691 ORTHO05D005552 5.6e-52 207.6 127 79.5
Os11g0139100 Oryza sativa ssp. japonica HOM05D004691 ORTHO05D005552 1.2e-51 206.5 127 78.0
SEGI_08900 Sequoiadendron giganteum HOM05D004691 ORTHO05D005552 1.6e-51 206.1 126 78.6
Oeu017325.1 Olea europaea HOM05D004691 ORTHO05D005552 3.6e-51 204.9 108 89.8
RcHm_v2.0_Chr1g0329861 Rosa chinensis HOM05D004691 ORTHO05D005552 8.1e-51 203.8 159 66.7
Glyma.02G145800 Glycine max HOM05D004691 ORTHO05D005552 1.4e-50 203.0 127 78.0
Os12g0135900 Oryza sativa ssp. japonica HOM05D004691 ORTHO05D005552 1.4e-50 203.0 127 77.2
Lj5g0022765 Lotus japonicus HOM05D004691 ORTHO05D005552 2.4e-50 202.2 127 78.0
RcHm_v2.0_Chr1g0329981 Rosa chinensis HOM05D004691 ORTHO05D005552 3.1e-50 201.8 120 82.5
Hma1.2p1_0525F.1_g172750 Hydrangea macrophylla HOM05D004691 ORTHO05D005552 1.5e-49 199.5 197 58.4
QL02p011400 Quercus lobata HOM05D004691 ORTHO05D005552 2.0e-49 199.1 184 58.7
Haze_24303 Corylus avellana HOM05D004691 ORTHO05D005552 6.4e-48 194.1 108 84.3
AUR62038661 Chenopodium quinoa HOM05D004691 ORTHO05D005552 8.4e-48 193.7 119 79.8
FAN20G3100 Fragaria x ananassa HOM05D004691 ORTHO05D005552 3.2e-47 191.8 127 78.0
Nn1g02379 Nelumbo nucifera HOM05D004691 ORTHO05D005552 2.7e-46 188.7 100 89.0
CAN.G1427.9 Capsicum annuum HOM05D004691 ORTHO05D005552 1.1e-44 183.3 99 88.9
Nitab4.5_0002485g0080 Nicotiana tabacum HOM05D004691 ORTHO05D005552 4.8e-43 177.9 126 73.0
Actinidia00785 Actinidia chinensis HOM05D004691 ORTHO05D005552 6.2e-43 177.6 127 70.9
HPP92_004579 Vanilla planifolia HOM05D004691 ORTHO05D005552 1.8e-42 176.0 119 73.9
Pp3c2_11670 Physcomitrium patens HOM05D004691 ORTHO05D005552 1.2e-38 163.3 126 66.7
SalBow8G2642 Salvia bowleyana HOM05D004691 ORTHO05D005552 1.3e-37 159.8 99 80.8
Psat6g047600 Pisum sativum HOM05D004691 ORTHO05D005552 4.3e-36 154.8 127 66.1
AagrBONN_evm.TU.Sc2ySwM_117.3924 Anthoceros agrestis HOM05D004691 ORTHO05D005552 2.9e-32 142.1 97 72.2
Mapoly0064s0052 Marchantia polymorpha HOM05D004691 ORTHO05D005552 6.7e-29 131.0 121 54.5
Duzib133G0007 Durio zibethinus HOM05D004691 ORTHO05D005552 2.5e-28 129.0 74 82.4
MCO13G165 Micromonas commoda HOM05D004691 ORTHO05D005552 6.9e-26 120.9 114 50.9
Oeu046808.1 Olea europaea HOM05D004691 ORTHO05D005552 2.3e-21 105.9 91 68.1
TAR362G0310 Trochodendron aralioides HOM05D004691 ORTHO05D005552 2.3e-21 105.9 54 94.4
Gohir.A12G003900 Gossypium hirsutum HOM05D004691 ORTHO05D005552 5.1e-21 104.8 54 92.6
SMO347G0488 Selaginella moellendorffii HOM05D004691 ORTHO05D005552 2.2e-19 99.4 123 45.5
CBR_g54238 Chara braunii HOM05D004691 ORTHO05D005552 4.2e-15 85.1 121 46.3
Cre07.g330450 Chlamydomonas reinhardtii HOM05D004691 ORTHO05D005552 4.6e-14 81.6 118 41.5
RcHm_v2.0_Chr7g0235701 Rosa chinensis HOM05D004691 ORTHO05D005552 4.8e-11 71.6 43 69.8
MD05G1236100 Malus domestica HOM05D000071 ORTHO05D000029 6.9e-10 67.8 54 68.5
Cfa021143 Carpinus fangiana HOM05D006032 ORTHO05D001488 1.4e-07 60.1 124 35.5
Psat6g046920 Pisum sativum HOM05D004691 ORTHO05D005552 3.2e-07 58.9 32 87.5
Thecc.01G231900 Theobroma cacao HOM05D004691 ORTHO05D005552 4.2e-07 58.5 34 76.5
SMO356G0620 Selaginella moellendorffii HOM05D006094 ORTHO05D007761 2.1e-06 56.2 92 38.0


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