Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0009661 Helianthus annuus HOM05D002482 ORTHO05D002594 3.0e-77 292.0 168 100.0
ECA248G1427 Erigeron canadensis HOM05D002482 ORTHO05D002594 1.3e-32 143.7 124 68.5
HanXRQChr13g0389311 Helianthus annuus HOM05D002482 ORTHO05D002594 2.3e-29 132.9 161 55.9
Lsat_1_v5_gn_5_164201 Lactuca sativa HOM05D002482 ORTHO05D002594 1.3e-24 117.1 122 64.8
Nitab4.5_0000016g0320 Nicotiana tabacum HOM05D002482 ORTHO05D002594 5.2e-13 78.6 107 48.6
Lalb_Chr14g0372381 Lupinus albus HOM05D002482 ORTHO05D002594 6.8e-13 78.2 123 43.9
Peaxi162Scf00258g00114 Petunia axillaris HOM05D002482 ORTHO05D002594 6.8e-13 78.2 120 49.2
Eucgr.B03652 Eucalyptus grandis HOM05D002482 ORTHO05D002594 8.9e-13 77.8 126 45.2
Oeu059767.1 Olea europaea HOM05D002482 ORTHO05D002594 1.2e-12 77.4 131 46.6
PGR142G1629 Punica granatum HOM05D002482 ORTHO05D002594 1.5e-12 77.0 125 45.6
Nitab4.5_0001474g0010 Nicotiana tabacum HOM05D002482 ORTHO05D002594 2.0e-12 76.6 109 50.5
Oeu064334.1 Olea europaea HOM05D002482 ORTHO05D002594 3.4e-12 75.9 130 46.2
VMungo1080G0530 Vigna mungo HOM05D002482 ORTHO05D002594 3.4e-12 75.9 127 43.3
MELO3C015682.2 Cucumis melo HOM05D002482 ORTHO05D002594 5.7e-12 75.1 128 46.1
CsaV3_1G042450 Cucumis sativus L. HOM05D002482 ORTHO05D002594 5.7e-12 75.1 128 46.1
Phvul.005G151900 Phaseolus vulgaris HOM05D002482 ORTHO05D002594 7.5e-12 74.7 130 43.1
ClCG03G013620 Citrullus lanatus HOM05D002482 ORTHO05D002594 9.8e-12 74.3 128 43.0
Nitab4.5_0001538g0060 Nicotiana tabacum HOM05D002482 ORTHO05D002594 1.3e-11 73.9 118 51.7
Actinidia20306 Actinidia chinensis HOM05D002482 ORTHO05D002594 1.7e-11 73.6 126 47.6
CAN.G1161.23 Capsicum annuum HOM05D002482 ORTHO05D002594 1.7e-11 73.6 119 50.4
Sabra03G0154000 Salix brachista HOM05D002482 ORTHO05D002594 1.7e-11 73.6 126 45.2
Gorai.002G225200 Gossypium raimondii HOM05D002482 ORTHO05D002594 2.2e-11 73.2 126 44.4
Nitab4.5_0000105g0010 Nicotiana tabacum HOM05D002482 ORTHO05D002594 2.9e-11 72.8 120 50.8
Actinidia09385 Actinidia chinensis HOM05D002482 ORTHO05D002594 3.7e-11 72.4 126 46.0
FAN21G3143 Fragaria x ananassa HOM05D002482 ORTHO05D002594 3.7e-11 72.4 155 35.5
PGSC0003DMG400023675 Solanum tuberosum HOM05D002482 ORTHO05D002594 3.7e-11 72.4 122 45.9
Migut.K00050 Erythranthe guttata HOM05D002482 ORTHO05D002594 4.9e-11 72.0 111 49.5
Gohir.D01G177900 Gossypium hirsutum HOM05D002482 ORTHO05D002594 4.9e-11 72.0 126 43.7
Dinv14279 Davidia involucrata HOM05D002482 ORTHO05D002594 6.4e-11 71.6 125 47.2
QL07p023255 Quercus lobata HOM05D002482 ORTHO05D002594 6.4e-11 71.6 130 46.2
CAN.G128.35 Capsicum annuum HOM05D002482 ORTHO05D002594 8.3e-11 71.2 128 43.8
Gohir.A01G192100 Gossypium hirsutum HOM05D002482 ORTHO05D002594 8.3e-11 71.2 126 43.7
RcHm_v2.0_Chr5g0077891 Rosa chinensis HOM05D002482 ORTHO05D002594 8.3e-11 71.2 126 42.9
PGSC0003DMG400011434 Solanum tuberosum HOM05D002482 ORTHO05D002594 8.3e-11 71.2 120 49.2
TWI53G0638 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 8.3e-11 71.2 124 46.8
Lj3g0009151 Lotus japonicus HOM05D002482 ORTHO05D002594 1.1e-10 70.9 124 44.4
MBI18_g27541_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 1.1e-10 70.9 127 44.1
CSS0050309 Camellia sinensis var. sinensis HOM05D002482 ORTHO05D002594 1.4e-10 70.5 132 46.2
Lalb_Chr22g0352231 Lupinus albus HOM05D002482 ORTHO05D002594 1.4e-10 70.5 124 44.4
MBI01_g20397_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 1.4e-10 70.5 127 44.1
Potri.T085200 Populus trichocarpa HOM05D002482 ORTHO05D002594 1.8e-10 70.1 126 44.4
Prupe.6G020200 Prunus persica HOM05D002482 ORTHO05D002594 1.8e-10 70.1 126 44.4
Prupe.7G074700 Prunus persica HOM05D002482 ORTHO05D002594 1.8e-10 70.1 126 44.4
Sabra01G0010600 Salix brachista HOM05D002482 ORTHO05D002594 1.8e-10 70.1 126 44.4
CANSAT54G1212 Cannabis sativa HOM05D002482 ORTHO05D002594 2.4e-10 69.7 133 42.9
Duzib106G0603 Durio zibethinus HOM05D002482 ORTHO05D002594 2.4e-10 69.7 135 40.7
FAN16G3054 Fragaria x ananassa HOM05D002482 ORTHO05D002594 2.4e-10 69.7 150 38.7
TPR.G18866 Trifolium pratense HOM05D002482 ORTHO05D002594 2.4e-10 69.7 125 44.0
Ca_01268_v3 Cicer arietinum L. HOM05D002482 ORTHO05D002594 3.2e-10 69.3 125 44.8
Haze_23038 Corylus avellana HOM05D002482 ORTHO05D002594 3.2e-10 69.3 125 44.0
Nitab4.5_0004991g0020 Nicotiana tabacum HOM05D002482 ORTHO05D002594 3.2e-10 69.3 118 44.1
Peaxi162Scf00003g04316 Petunia axillaris HOM05D002482 ORTHO05D002594 3.2e-10 69.3 120 45.0
Potri.003G211200 Populus trichocarpa HOM05D002482 ORTHO05D002594 3.2e-10 69.3 126 46.0
Solyc10g078710.1 Solanum lycopersicum HOM05D002482 ORTHO05D002594 3.2e-10 69.3 119 43.7
Sopen10g029330 Solanum pennellii HOM05D002482 ORTHO05D002594 3.2e-10 69.3 119 43.7
MSTRG.17570 Avicennia marina HOM05D002482 ORTHO05D002594 4.1e-10 68.9 124 43.5
Duzib093G0057 Durio zibethinus HOM05D002482 ORTHO05D002594 4.1e-10 68.9 127 43.3
Glyma.15G031200 Glycine max HOM05D002482 ORTHO05D002594 4.1e-10 68.9 126 46.8
Solyc10g080450.3 Solanum lycopersicum HOM05D002482 ORTHO05D002594 4.1e-10 68.9 122 45.9
arahy.Tifrunner.gnm1.ann1.KXG6SZ Arachis hypogaea HOM05D002482 ORTHO05D002594 5.4e-10 68.6 125 43.2
arahy.Tifrunner.gnm1.ann1.SGG4FM Arachis hypogaea HOM05D002482 ORTHO05D002594 5.4e-10 68.6 125 43.2
arahy.Tifrunner.gnm1.ann1.T66IS6 Arachis hypogaea HOM05D002482 ORTHO05D002594 5.4e-10 68.6 129 41.9
CANSAT64G1244 Cannabis sativa HOM05D002482 ORTHO05D002594 5.4e-10 68.6 119 43.7
Haze_19967 Corylus avellana HOM05D002482 ORTHO05D002594 5.4e-10 68.6 128 46.1
MBI07_g38549_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 5.4e-10 68.6 127 43.3
MD11G1024200 Malus domestica HOM05D002482 ORTHO05D002594 5.4e-10 68.6 126 44.4
Sopen10g030990 Solanum pennellii HOM05D002482 ORTHO05D002594 5.4e-10 68.6 123 45.5
Cfa016904 Carpinus fangiana HOM05D002482 ORTHO05D002594 7.0e-10 68.2 128 45.3
Duzib170G0550 Durio zibethinus HOM05D002482 ORTHO05D002594 7.0e-10 68.2 127 44.9
FvH4_3g43480 Fragaria vesca HOM05D002482 ORTHO05D002594 7.0e-10 68.2 137 41.6
Manes.08G045200 Manihot esculenta HOM05D002482 ORTHO05D002594 7.0e-10 68.2 126 46.8
Ciclev10017123m.g Citrus clementina HOM05D002482 ORTHO05D002594 9.2e-10 67.8 126 44.4
Medtr2g098560 Medicago truncatula HOM05D002482 ORTHO05D002594 9.2e-10 67.8 124 42.7
SGA_v2.0_scaffold274G46473 Striga asiatica HOM05D002482 ORTHO05D002594 9.2e-10 67.8 133 45.1
SGA_v2.0_scaffold94G28435 Striga asiatica HOM05D002482 ORTHO05D002594 9.2e-10 67.8 132 41.7
Atru.chr3.2481 Acer truncatum HOM05D002482 ORTHO05D002594 1.2e-09 67.4 126 44.4
Glyma.13G343200 Glycine max HOM05D002482 ORTHO05D002594 1.2e-09 67.4 129 47.3
TWI60G0941 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 1.2e-09 67.4 134 41.8
FAN11G3364 Fragaria x ananassa HOM05D002482 ORTHO05D002594 1.6e-09 67.0 138 39.9
SalBow6G3189 Salvia bowleyana HOM05D002482 ORTHO05D002594 1.6e-09 67.0 89 49.4
Sed0013064 Sechium edule HOM05D002482 ORTHO05D002594 1.6e-09 67.0 126 44.4
TWI74G0336 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 1.6e-09 67.0 124 44.4
Peaxi162Scf74350g00001 Petunia axillaris HOM05D002482 ORTHO05D002594 2.0e-09 66.6 115 45.2
Hma1.2p1_0005F.1_g004220 Hydrangea macrophylla HOM05D002482 ORTHO05D002594 2.7e-09 66.2 126 42.9
Peaxi162Scf00248g00031 Petunia axillaris HOM05D002482 ORTHO05D002594 2.7e-09 66.2 115 44.3
Phvul.001G141100 Phaseolus vulgaris HOM05D002482 ORTHO05D002594 2.7e-09 66.2 126 44.4
Sabra03G0156500 Salix brachista HOM05D002482 ORTHO05D002594 2.7e-09 66.2 126 42.9
Eucgr.J00835 Eucalyptus grandis HOM05D002482 ORTHO05D002594 3.5e-09 65.9 120 42.5
GSVIVG01033518001 Vitis vinifera HOM05D002482 ORTHO05D002594 3.5e-09 65.9 109 45.0
Atru.chr8.1067 Acer truncatum HOM05D002482 ORTHO05D002594 4.6e-09 65.5 129 41.1
MSTRG.6469 Avicennia marina HOM05D002482 ORTHO05D002594 4.6e-09 65.5 129 41.1
Duzib128G0672 Durio zibethinus HOM05D002482 ORTHO05D002594 4.6e-09 65.5 125 40.8
Nitab4.5_0007123g0010 Nicotiana tabacum HOM05D002482 ORTHO05D002594 4.6e-09 65.5 116 43.1
Potri.001G015000 Populus trichocarpa HOM05D002482 ORTHO05D002594 4.6e-09 65.5 126 40.5
Sed0019726 Sechium edule HOM05D002482 ORTHO05D002594 5.9e-09 65.1 128 39.8
VMungo1383G2553 Vigna mungo HOM05D002482 ORTHO05D002594 5.9e-09 65.1 127 42.5
TWI34G0028 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 7.8e-09 64.7 131 40.5
TAR633G2740 Trochodendron aralioides HOM05D002482 ORTHO05D002594 7.8e-09 64.7 127 40.9
Dinv36314 Davidia involucrata HOM05D002482 ORTHO05D002594 1.0e-08 64.3 126 40.5
Lalb_Chr24g0396901 Lupinus albus HOM05D002482 ORTHO05D002594 1.0e-08 64.3 112 44.6
MBI02_g15228_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 1.0e-08 64.3 108 42.6
Manes.14G014800 Manihot esculenta HOM05D002482 ORTHO05D002594 1.0e-08 64.3 127 43.3
vmacro09110 Vaccinium macrocarpon HOM05D002482 ORTHO05D002594 1.0e-08 64.3 128 43.0
Ah.06g193390 Amaranthus hybridus HOM05D002482 ORTHO05D002594 1.3e-08 63.9 119 42.9
CiPaw.10G027600 Carya illinoinensis HOM05D002482 ORTHO05D002594 1.3e-08 63.9 133 41.4
Gohir.A04G069200 Gossypium hirsutum HOM05D002482 ORTHO05D002594 1.3e-08 63.9 126 41.3
MBI02_g29739_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 1.3e-08 63.9 127 42.5
MBI04_g32793_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 1.3e-08 63.9 126 38.1
TAR623G0302 Trochodendron aralioides HOM05D002482 ORTHO05D002594 1.3e-08 63.9 127 38.6
Glyma.03G143200 Glycine max HOM05D002482 ORTHO05D002594 1.7e-08 63.5 126 42.1
Psat1g007440 Pisum sativum HOM05D002482 ORTHO05D002594 1.7e-08 63.5 126 42.9
MSTRG.26092 Avicennia marina HOM05D002482 ORTHO05D002594 2.3e-08 63.2 130 42.3
CiPaw.14G125600 Carya illinoinensis HOM05D002482 ORTHO05D002594 2.3e-08 63.2 126 42.9
Glyma.19G146200 Glycine max HOM05D002482 ORTHO05D002594 3.0e-08 62.8 126 42.1
Glyma.12G053700 Glycine max HOM05D002482 ORTHO05D002594 3.9e-08 62.4 130 46.2
Gohir.D04G085264 Gossypium hirsutum HOM05D002482 ORTHO05D002594 3.9e-08 62.4 126 41.3
Gorai.006G067400 Gossypium raimondii HOM05D002482 ORTHO05D002594 3.9e-08 62.4 128 40.6
Sc13g0002170 Simmondsia chinensis HOM05D002482 ORTHO05D002594 3.9e-08 62.4 128 42.2
Lj1g0014700 Lotus japonicus HOM05D002482 ORTHO05D002594 5.0e-08 62.0 125 41.6
MD03G1021700 Malus domestica HOM05D002482 ORTHO05D002594 5.0e-08 62.0 127 40.2
Rhsim01G0189200 Rhododendron simsii HOM05D002482 ORTHO05D002594 5.0e-08 62.0 126 42.1
Cpa.g.sc85.84 Carica papaya HOM05D002482 ORTHO05D002594 6.6e-08 61.6 128 38.3
Ca_08509_v3 Cicer arietinum L. HOM05D002482 ORTHO05D002594 6.6e-08 61.6 127 37.8
Manes.06G169100 Manihot esculenta HOM05D002482 ORTHO05D002594 6.6e-08 61.6 126 38.9
Dinv08056 Davidia involucrata HOM05D002482 ORTHO05D002594 1.1e-07 60.8 131 39.7
Duzib150G0288 Durio zibethinus HOM05D002482 ORTHO05D002594 1.1e-07 60.8 126 43.7
Oeu029224.1 Olea europaea HOM05D002482 ORTHO05D002594 1.1e-07 60.8 130 43.1
Rhsim04G0097600 Rhododendron simsii HOM05D002482 ORTHO05D002594 1.1e-07 60.8 127 41.7
TWI32G0211 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 1.1e-07 60.8 131 39.7
ECA248G2310 Erigeron canadensis HOM05D002482 ORTHO05D002594 1.5e-07 60.5 122 39.3
COL.COLO4_38439 Corchorus olitorius HOM05D002482 ORTHO05D002594 1.9e-07 60.1 126 38.9
Peaxi162Scf00406g00114 Petunia axillaris HOM05D002482 ORTHO05D002594 1.9e-07 60.1 120 42.5
TAR369G1015 Trochodendron aralioides HOM05D002482 ORTHO05D002594 2.5e-07 59.7 127 40.9
MD12G1058100 Malus domestica HOM05D002482 ORTHO05D002594 3.3e-07 59.3 126 41.3
Nitab4.5_0000006g0620 Nicotiana tabacum HOM05D002482 ORTHO05D002594 3.3e-07 59.3 125 40.8
TAR636G3241 Trochodendron aralioides HOM05D002482 ORTHO05D002594 3.3e-07 59.3 116 41.4
Ciclev10013062m.g Citrus clementina HOM05D002482 ORTHO05D002594 4.3e-07 58.9 124 40.3
Lalb_Chr04g0259621 Lupinus albus HOM05D002482 ORTHO05D002594 4.3e-07 58.9 127 40.2
SalBow1G0376 Salvia bowleyana HOM05D002482 ORTHO05D002594 4.3e-07 58.9 49 57.1
SalBow1G8670 Salvia bowleyana HOM05D002482 ORTHO05D002594 4.3e-07 58.9 49 57.1
Nitab4.5_0004499g0020 Nicotiana tabacum HOM05D002482 ORTHO05D002594 5.6e-07 58.5 125 41.6
PSO339G2218 Papaver somniferum HOM05D002482 ORTHO05D002594 5.6e-07 58.5 128 37.5
Psat3g069480 Pisum sativum HOM05D002482 ORTHO05D002594 5.6e-07 58.5 126 38.9
BcaB02g07565 Brassica carinata HOM05D002482 ORTHO05D002594 9.5e-07 57.8 124 39.5
CiPaw.13G167200 Carya illinoinensis HOM05D002482 ORTHO05D002594 9.5e-07 57.8 126 40.5
HanXRQChr01g0021081 Helianthus annuus HOM05D002482 ORTHO05D002594 9.5e-07 57.8 124 41.9
MD14G1059900 Malus domestica HOM05D002482 ORTHO05D002594 9.5e-07 57.8 126 40.5
QL01p007129 Quercus lobata HOM05D002482 ORTHO05D002594 9.5e-07 57.8 127 40.2
Migut.N02291 Erythranthe guttata HOM05D002482 ORTHO05D002594 1.2e-06 57.4 123 41.5
Glyma.11G129100 Glycine max HOM05D002482 ORTHO05D002594 1.2e-06 57.4 127 40.9
EL10Ac3g06936 Beta vulgaris HOM05D002482 ORTHO05D002594 1.6e-06 57.0 131 38.2
BcaC08g44879 Brassica carinata HOM05D002482 ORTHO05D002594 1.6e-06 57.0 123 37.4
BolC6t37649H Brassica oleracea HOM05D002482 ORTHO05D002594 1.6e-06 57.0 123 37.4
CiPaw.09G031700 Carya illinoinensis HOM05D002482 ORTHO05D002594 1.6e-06 57.0 130 41.5
Gohir.D06G112200 Gossypium hirsutum HOM05D002482 ORTHO05D002594 1.6e-06 57.0 126 42.1
AL5G39580 Arabidopsis lyrata HOM05D002482 ORTHO05D002594 2.1e-06 56.6 130 36.9
Actinidia06318 Actinidia chinensis HOM05D002482 ORTHO05D002594 3.6e-06 55.8 108 43.5
Oeu033191.1 Olea europaea HOM05D002482 ORTHO05D002594 3.6e-06 55.8 105 41.9
Aqoxy1G00163 Aquilegia oxysepala HOM05D002482 ORTHO05D002594 4.7e-06 55.5 128 36.7
Thhalv10006306m.g Eutrema salsugineum HOM05D002482 ORTHO05D002594 4.7e-06 55.5 127 43.3
Gorai.010G128000 Gossypium raimondii HOM05D002482 ORTHO05D002594 4.7e-06 55.5 126 42.1
MBI14_g23622_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 4.7e-06 55.5 65 49.2
Thecc.09G221400 Theobroma cacao HOM05D002482 ORTHO05D002594 6.2e-06 55.1 122 37.7
AUR62024320 Chenopodium quinoa HOM05D002482 ORTHO05D002594 8.0e-06 54.7 126 38.9
Nn2g15614 Nelumbo nucifera HOM05D002482 ORTHO05D002594 8.0e-06 54.7 118 39.8
RcHm_v2.0_Chr3g0480181 Rosa chinensis HOM05D002482 ORTHO05D002594 8.0e-06 54.7 125 39.2
VMungo1127G1293 Vigna mungo HOM05D002482 ORTHO05D002594 8.0e-06 54.7 121 41.3


User provided reference genes

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