Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0008871 Helianthus annuus HOM05D024936 ORTHO05D000992 6.2e-64 247.3 124 100.0
HanXRQChr16g0512731 Helianthus annuus HOM05D024936 ORTHO05D220611 3.4e-17 92.0 56 80.4
HanXRQChr17g0544671 Helianthus annuus HOM05D024936 ORTHO05D221692 4.4e-17 91.7 47 91.5
HanXRQChr12g0366121 Helianthus annuus HOM05D001166 ORTHO05D000992 3.5e-14 82.0 69 68.1
HanXRQChr14g0453581 Helianthus annuus HOM05D001166 ORTHO05D000992 3.5e-14 82.0 69 68.1
HanXRQChr14g0453591 Helianthus annuus HOM05D001166 ORTHO05D000992 3.5e-14 82.0 63 68.3
HanXRQChr08g0224711 Helianthus annuus HOM05D001166 ORTHO05D000992 1.5e-09 66.6 50 70.0
Hma1.2p1_0122F.1_g057580 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 2.6e-09 65.9 59 57.6
Dinv02666 Davidia involucrata HOM05D001166 ORTHO05D000992 4.4e-09 65.1 46 67.4
Dinv02667 Davidia involucrata HOM05D001166 ORTHO05D000992 4.4e-09 65.1 46 67.4
CAN.G59.2 Capsicum annuum HOM05D001166 ORTHO05D000992 5.7e-09 64.7 49 61.2
ECA233G4885 Erigeron canadensis HOM05D001166 ORTHO05D000992 5.7e-09 64.7 50 72.0
ECA246G0438 Erigeron canadensis HOM05D001166 ORTHO05D000992 5.7e-09 64.7 48 66.7
Lsat_1_v5_gn_8_32640 Lactuca sativa HOM05D001166 ORTHO05D000992 1.3e-08 63.5 66 51.5
CAN.G194.24 Capsicum annuum HOM05D001166 ORTHO05D000992 2.2e-08 62.8 72 50.0
Lsat_1_v5_gn_3_34220 Lactuca sativa HOM05D001166 ORTHO05D000992 2.2e-08 62.8 46 67.4
Peaxi162Scf00329g00514 Petunia axillaris HOM05D001166 ORTHO05D000992 2.2e-08 62.8 49 61.2
HanXRQChr16g0526721 Helianthus annuus HOM05D001166 ORTHO05D000992 2.8e-08 62.4 46 67.4
Lsat_1_v5_gn_4_26281 Lactuca sativa HOM05D001166 ORTHO05D000992 3.7e-08 62.0 46 65.2
HanXRQChr08g0209291 Helianthus annuus HOM05D001166 ORTHO05D000992 4.9e-08 61.6 46 67.4
Dinv02963 Davidia involucrata HOM05D001166 ORTHO05D000992 6.3e-08 61.2 46 60.9
HanXRQChr17g0565521 Helianthus annuus HOM05D001166 ORTHO05D000992 6.3e-08 61.2 66 50.0
Peaxi162Scf00315g00026 Petunia axillaris HOM05D001166 ORTHO05D000992 1.1e-07 60.5 47 61.7
Cc11_g00010 Coffea canephora HOM05D001166 ORTHO05D000992 1.4e-07 60.1 46 56.5
ECA234G1877 Erigeron canadensis HOM05D001166 ORTHO05D000992 1.8e-07 59.7 46 63.0
Solyc04g008690.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 1.8e-07 59.7 49 57.1
Sopen04g003860 Solanum pennellii HOM05D001166 ORTHO05D000992 1.8e-07 59.7 49 57.1
Migut.L00783 Erythranthe guttata HOM05D001166 ORTHO05D000992 2.4e-07 59.3 46 58.7
MSTRG.13666 Avicennia marina HOM05D001166 ORTHO05D000992 7.0e-07 57.8 46 58.7
DCAR_023503 Daucus carota HOM05D001166 ORTHO05D000992 9.2e-07 57.4 58 50.0
MSTRG.2080 Avicennia marina HOM05D001166 ORTHO05D000992 1.2e-06 57.0 46 54.3
Migut.E00602 Erythranthe guttata HOM05D001166 ORTHO05D000992 1.2e-06 57.0 69 46.4
Atru.chr11.1094 Acer truncatum HOM05D001166 ORTHO05D000992 2.0e-06 56.2 46 58.7
Manes.10G068800 Manihot esculenta HOM05D001166 ORTHO05D000992 2.7e-06 55.8 46 56.5
unitig_27.g25292 Utricularia gibba HOM05D001166 ORTHO05D000992 2.7e-06 55.8 44 59.1
DCAR_030342 Daucus carota HOM05D001166 ORTHO05D000992 4.5e-06 55.1 54 53.7
GSVIVG01010225001 Vitis vinifera HOM05D001166 ORTHO05D000992 4.5e-06 55.1 46 54.3
HanXRQChr17g0540641 Helianthus annuus HOM05D001166 ORTHO05D000992 5.9e-06 54.7 46 58.7


User provided reference genes

Program Settings