Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 5.9e-49 197.2 99 100.0
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 8.6e-16 87.0 53 75.5
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 8.6e-16 87.0 42 90.5
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 8.6e-16 87.0 55 72.7
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 8.6e-16 87.0 43 88.4
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 1.5e-15 86.3 53 75.5
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 1.9e-15 85.9 48 81.2
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 2.5e-15 85.5 42 90.5
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 2.5e-15 85.5 42 90.5
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 3.3e-15 85.1 48 77.1
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 3.3e-15 85.1 48 79.2
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 4.3e-15 84.7 48 75.0
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 4.3e-15 84.7 41 90.2
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 4.3e-15 84.7 42 88.1
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 9.5e-15 83.6 42 88.1
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 9.5e-15 83.6 43 86.0
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 9.5e-15 83.6 48 75.0
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.2e-14 83.2 53 71.7
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 1.2e-14 83.2 42 88.1
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.2e-14 83.2 43 83.7
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.6e-14 82.8 42 83.3
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.6e-14 82.8 42 85.7
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.6e-14 82.8 42 83.3
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 2.1e-14 82.4 48 77.1
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 2.1e-14 82.4 55 69.1
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 2.1e-14 82.4 48 77.1
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 2.1e-14 82.4 42 83.3
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 2.1e-14 82.4 48 75.0
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 2.8e-14 82.0 69 55.1
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 2.8e-14 82.0 58 63.8
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 2.8e-14 82.0 42 85.7
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.8e-14 82.0 48 72.9
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 2.8e-14 82.0 48 72.9
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.8e-14 82.0 48 72.9
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 2.8e-14 82.0 48 72.9
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 2.8e-14 82.0 48 72.9
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 2.8e-14 82.0 43 83.7
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 2.8e-14 82.0 48 77.1
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 2.8e-14 82.0 48 70.8
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 3.6e-14 81.6 48 72.9
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 4.7e-14 81.3 41 85.4
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 4.7e-14 81.3 42 85.7
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 6.2e-14 80.9 42 83.3
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 1.1e-13 80.1 48 70.8
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 1.1e-13 80.1 48 70.8
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 1.1e-13 80.1 48 70.8
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 1.1e-13 80.1 48 70.8
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 1.1e-13 80.1 48 70.8
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 1.1e-13 80.1 42 83.3
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 1.1e-13 80.1 59 64.4
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 1.4e-13 79.7 58 58.6
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 1.4e-13 79.7 42 83.3
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 1.4e-13 79.7 48 70.8
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.4e-13 79.7 41 82.9
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 1.4e-13 79.7 41 82.9
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 1.4e-13 79.7 42 83.3
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 1.8e-13 79.3 48 70.8
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 1.8e-13 79.3 48 70.8
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 1.8e-13 79.3 48 70.8
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 1.8e-13 79.3 48 72.9
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.8e-13 79.3 41 80.5
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 1.8e-13 79.3 41 85.4
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 2.3e-13 79.0 48 72.9
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 2.3e-13 79.0 42 81.0
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 2.3e-13 79.0 42 81.0
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 3.1e-13 78.6 47 72.3
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 3.1e-13 78.6 56 58.9
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 3.1e-13 78.6 56 64.3
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 3.1e-13 78.6 48 70.8
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 5.2e-13 77.8 42 76.2
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 8.9e-13 77.0 48 66.7
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 8.9e-13 77.0 42 78.6
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 8.9e-13 77.0 42 76.2
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 1.5e-12 76.3 42 73.8
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 1.5e-12 76.3 42 78.6
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 1.5e-12 76.3 42 78.6
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.5e-12 76.3 48 66.7
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 2.0e-12 75.9 41 78.0
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 2.0e-12 75.9 41 80.5
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 2.0e-12 75.9 48 68.8
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 3.4e-12 75.1 48 66.7
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 4.4e-12 74.7 39 84.6
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 5.8e-12 74.3 42 73.8
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 1.3e-11 73.2 41 82.9
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 4.9e-11 71.2 43 67.4
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 4.9e-11 71.2 43 67.4
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 3.2e-10 68.6 41 68.3
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 7.1e-10 67.4 34 91.2
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 1.2e-09 66.6 80 43.8
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 1.7e-08 62.8 34 79.4
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 9.5e-07 57.0 51 60.8


User provided reference genes

Program Settings