Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.3e-221 772.7 376 100.0
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 7.7e-166 587.4 393 77.1
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 1.2e-126 457.2 415 61.9
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.2e-94 350.9 392 53.1
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 7.9e-94 348.2 441 46.3
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 3.3e-92 342.8 461 45.1
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.3e-91 340.9 408 49.8
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 6.2e-91 338.6 425 47.1
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.1e-90 337.8 408 49.0
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 3.1e-90 336.3 419 47.7
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 6.9e-90 335.1 418 46.4
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 9.0e-90 334.7 424 48.6
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.2e-89 334.3 424 48.3
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.5e-89 334.0 426 48.6
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 5.8e-89 332.0 422 47.6
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 7.6e-89 331.6 423 48.0
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.3e-88 330.9 409 48.9
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 1.1e-87 327.8 399 48.9
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.1e-87 327.8 406 48.3
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 2.5e-87 326.6 500 42.0
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 7.1e-87 325.1 448 43.8
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.6e-86 323.9 434 46.5
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.0e-85 321.2 408 47.5
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.3e-85 320.9 467 42.2
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.8e-85 320.5 388 49.0
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 3.0e-85 319.7 413 46.5
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 3.0e-85 319.7 424 46.7
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 1.5e-84 317.4 417 47.2
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.5e-84 317.4 418 44.3
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.5e-84 316.6 398 46.7
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 4.3e-84 315.8 405 46.2
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 5.7e-84 315.5 407 46.2
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 7.4e-84 315.1 309 54.7
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 9.6e-84 314.7 498 40.8
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.3e-83 314.3 355 50.4
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.8e-83 313.2 418 45.7
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 3.7e-83 312.8 404 45.0
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 4.8e-83 312.4 422 45.0
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.4e-82 310.8 403 44.9
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.4e-82 310.1 400 46.8
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.1e-82 309.3 422 45.3
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 5.3e-82 308.9 428 44.2
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 4.5e-81 305.8 439 43.5
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 5.9e-81 305.4 423 45.4
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.9e-81 305.4 422 44.5
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 7.6e-81 305.1 419 45.1
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 7.6e-81 305.1 425 46.1
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.0e-80 304.7 423 45.2
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 5.0e-80 302.4 413 44.3
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 7.2e-79 298.5 425 44.7
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.6e-78 297.4 460 43.5
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 2.1e-78 297.0 448 40.8
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.1e-78 297.0 420 44.3
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 2.1e-78 297.0 422 44.3
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 3.5e-78 296.2 454 41.0
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 2.3e-77 293.5 426 43.0
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 3.0e-77 293.1 399 45.4
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 4.3e-76 289.3 334 49.4
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 1.6e-75 287.3 330 47.3
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 2.2e-75 287.0 311 49.5
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.4e-74 284.3 372 44.9
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 3.1e-74 283.1 396 42.4
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 5.3e-74 282.3 389 41.9
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 6.9e-74 282.0 497 39.0
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.2e-73 281.2 338 45.6
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 5.9e-73 278.9 335 46.0
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 5.9e-73 278.9 335 46.0
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.7e-72 277.3 334 45.5
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 1.7e-72 277.3 406 40.9
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 2.9e-72 276.6 334 45.5
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 2.9e-72 276.6 334 45.5
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 3.8e-72 276.2 337 45.4
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.4e-71 274.2 341 45.7
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.9e-71 273.9 339 44.8
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.9e-71 273.9 307 48.9
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 6.1e-70 268.9 358 45.5
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.3e-69 266.9 341 44.3
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 5.1e-69 265.8 329 46.2
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.5e-68 263.5 435 42.1
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.1e-66 258.1 430 39.8
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 6.9e-66 255.4 337 42.7
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.9e-63 247.3 221 57.0
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 2.7e-62 243.4 435 38.4
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.7e-59 234.2 270 52.6
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.4e-58 230.3 225 52.9
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 5.3e-58 229.2 320 43.8
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 3.5e-57 226.5 289 39.8
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 3.2e-55 219.9 281 47.0
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 9.4e-55 218.4 281 49.8
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.6e-54 217.6 235 50.2
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.8e-53 214.2 196 54.6
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 8.8e-53 211.8 254 49.2
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 2.0e-52 210.7 289 46.0
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 5.9e-49 199.1 336 41.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 5.0e-48 196.1 251 48.6
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 7.2e-47 192.2 226 47.3
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 9.1e-42 175.3 334 41.0
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 4.5e-41 172.9 236 43.2
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 5.0e-40 169.5 121 64.5
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 8.8e-37 158.7 128 60.2
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 3.8e-32 143.3 211 38.4
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 2.3e-29 134.0 92 71.7
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 4.0e-29 133.3 290 32.4
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.2e-28 131.7 220 40.0
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.8e-26 124.4 151 43.0
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 6.6e-24 115.9 113 56.6
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 2.1e-22 110.9 137 42.3
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 4.0e-21 106.7 140 40.7
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 4.6e-17 93.2 226 35.0
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 1.6e-14 84.7 183 30.1
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 4.7e-14 83.2 118 39.8
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.8e-13 81.3 354 26.6
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 2.6e-12 77.4 137 29.9
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 7.5e-12 75.9 130 42.3
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.3e-08 65.1 84 47.6
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 9.5e-07 58.9 68 50.0


User provided reference genes

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