Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0007061 Helianthus annuus HOM05D002705 ORTHO05D009765 6.0e-177 624.0 304 100.0
Lsat_1_v5_gn_5_149781 Lactuca sativa HOM05D002705 ORTHO05D009765 6.6e-91 338.2 314 59.6
Peaxi162Scf00035g00292 Petunia axillaris HOM05D002705 ORTHO05D009765 8.4e-54 214.9 282 41.5
Dinv00192 Davidia involucrata HOM05D002705 ORTHO05D009765 8.7e-51 204.9 250 48.0
CSS0039583 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D009765 2.5e-50 203.4 315 40.0
Nitab4.5_0002027g0160 Nicotiana tabacum HOM05D002705 ORTHO05D009765 4.0e-48 196.1 291 39.2
QL08p044244 Quercus lobata HOM05D002705 ORTHO05D009765 9.0e-48 194.9 292 41.1
PGSC0003DMG400021284 Solanum tuberosum HOM05D002705 ORTHO05D009765 1.5e-47 194.1 256 41.0
Medtr3g048300 Medicago truncatula HOM05D002705 ORTHO05D009765 4.5e-47 192.6 263 44.9
TPR.G16998 Trifolium pratense HOM05D002705 ORTHO05D009765 4.5e-47 192.6 266 43.2
Solyc10g007750.1 Solanum lycopersicum HOM05D002705 ORTHO05D009765 5.8e-47 192.2 251 41.8
GSVIVG01020876001 Vitis vinifera HOM05D002705 ORTHO05D009765 1.7e-46 190.7 246 42.3
Ciclev10033364m.g Citrus clementina HOM05D002705 ORTHO05D009765 2.2e-46 190.3 269 42.0
Migut.M00492 Erythranthe guttata HOM05D002705 ORTHO05D009765 2.9e-46 189.9 303 37.3
TAR627G0723 Trochodendron aralioides HOM05D002705 ORTHO05D009765 1.1e-45 188.0 255 42.4
ClCG09G022450 Citrullus lanatus HOM05D002705 ORTHO05D009765 1.9e-45 187.2 255 42.0
MELO3C014476.2 Cucumis melo HOM05D002705 ORTHO05D009765 2.5e-45 186.8 294 38.8
Rhsim06G0115800 Rhododendron simsii HOM05D002705 ORTHO05D009765 2.5e-45 186.8 263 43.3
Ca_12230_v3 Cicer arietinum L. HOM05D002705 ORTHO05D009765 1.2e-44 184.5 251 44.2
Potri.005G202300 Populus trichocarpa HOM05D002705 ORTHO05D009765 1.3e-43 181.0 257 45.5
Cpa.g.sc50.86 Carica papaya HOM05D002705 ORTHO05D009765 1.8e-43 180.6 251 42.6
arahy.Tifrunner.gnm1.ann1.4LV4GA Arachis hypogaea HOM05D002705 ORTHO05D009765 3.0e-43 179.9 276 40.2
DCAR_009797 Daucus carota HOM05D002705 ORTHO05D009765 3.0e-43 179.9 261 41.0
CsaV3_6G038120 Cucumis sativus L. HOM05D002705 ORTHO05D009765 3.9e-43 179.5 294 38.4
arahy.Tifrunner.gnm1.ann1.Y3CUXW Arachis hypogaea HOM05D002705 ORTHO05D009765 1.1e-42 177.9 277 39.7
FvH4_6g38280 Fragaria vesca HOM05D002705 ORTHO05D009765 1.1e-42 177.9 253 40.3
FAN14G4218 Fragaria x ananassa HOM05D002705 ORTHO05D009765 1.1e-42 177.9 253 40.3
Lalb_Chr03g0031241 Lupinus albus HOM05D002705 ORTHO05D009765 1.5e-42 177.6 254 41.3
Hma1.2p1_0529F.1_g173240 Hydrangea macrophylla HOM05D002705 ORTHO05D009765 2.5e-42 176.8 281 43.1
MSTRG.6743 Avicennia marina HOM05D002705 ORTHO05D009765 3.3e-42 176.4 253 41.5
Nn4g26472 Nelumbo nucifera HOM05D002705 ORTHO05D009765 3.3e-42 176.4 257 40.9
Sed0010957 Sechium edule HOM05D002705 ORTHO05D009765 3.3e-42 176.4 258 38.8
VMungo0540G0513 Vigna mungo HOM05D002705 ORTHO05D009765 5.7e-42 175.6 255 42.0
Lj6g0006663 Lotus japonicus HOM05D002705 ORTHO05D009765 7.4e-42 175.3 247 43.7
Phvul.006G032900 Phaseolus vulgaris HOM05D002705 ORTHO05D009765 9.6e-42 174.9 252 42.9
Sed0024385 Sechium edule HOM05D002705 ORTHO05D009765 2.1e-41 173.7 254 39.0
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.7e-41 172.9 253 39.5
Atru.chr6.2088 Acer truncatum HOM05D002705 ORTHO05D009765 1.8e-40 170.6 233 44.2
Actinidia06118 Actinidia chinensis HOM05D002705 ORTHO05D009765 1.8e-40 170.6 251 42.2
Nn3g20892 Nelumbo nucifera HOM05D002705 ORTHO05D009765 2.4e-40 170.2 241 40.7
Glyma.18G107200 Glycine max HOM05D002705 ORTHO05D009765 4.1e-40 169.5 278 38.5
FAN09G3459 Fragaria x ananassa HOM05D002705 ORTHO05D009765 9.0e-40 168.3 253 38.7
Manes.02G084700 Manihot esculenta HOM05D002705 ORTHO05D009765 9.0e-40 168.3 304 37.5
Prupe.3G173400 Prunus persica HOM05D002705 ORTHO05D009765 1.5e-39 167.5 278 39.2
Thecc.01G162500 Theobroma cacao HOM05D002705 ORTHO05D009765 1.3e-38 164.5 264 39.0
ECA248G0079 Erigeron canadensis HOM05D002705 ORTHO05D009765 2.2e-38 163.7 132 59.1
COL.COLO4_08449 Corchorus olitorius HOM05D000244 ORTHO05D009765 6.5e-38 162.2 265 41.9
BraA05t19329Z Brassica rapa HOM05D002705 ORTHO05D009765 9.3e-37 158.3 266 41.4
Gorai.012G041100 Gossypium raimondii HOM05D002705 ORTHO05D009765 2.1e-36 157.1 219 42.5
SGA_v2.0_scaffold70G23654 Striga asiatica HOM05D002705 ORTHO05D009765 2.1e-36 157.1 278 36.0
A05p03430 Brassica napus HOM05D002705 ORTHO05D009765 3.5e-36 156.4 267 41.2
Gohir.D04G036300 Gossypium hirsutum HOM05D002705 ORTHO05D009765 4.6e-36 156.0 219 42.0
PSO675G7613 Papaver somniferum HOM05D002705 ORTHO05D009765 7.9e-36 155.2 300 35.7
Duzib264G0970 Durio zibethinus HOM05D002705 ORTHO05D009765 3.9e-35 152.9 167 49.1
MBI10_g34778_MAGBIO Magnolia biondii HOM05D002705 ORTHO05D009765 3.9e-35 152.9 196 42.3
Gohir.A05G379200 Gossypium hirsutum HOM05D002705 ORTHO05D009765 5.1e-35 152.5 174 47.1
Aqoxy1G01839 Aquilegia oxysepala HOM05D002705 ORTHO05D009765 1.1e-34 151.4 266 37.2
Eucgr.K01214 Eucalyptus grandis HOM05D002705 ORTHO05D009765 1.5e-34 151.0 204 41.7
THA.LOC104802278 Tarenaya hassleriana HOM05D002705 ORTHO05D009765 2.5e-34 150.2 240 38.8
SalBow8G3518 Salvia bowleyana HOM05D002705 ORTHO05D009765 7.4e-34 148.7 265 33.6
Psat5g181640 Pisum sativum HOM05D002705 ORTHO05D009765 1.6e-33 147.5 197 43.1
Sopen10g003660 Solanum pennellii HOM05D002705 ORTHO05D009765 2.2e-33 147.1 203 40.4
C04p04000 Brassica napus HOM05D002705 ORTHO05D009765 6.9e-32 142.1 269 39.4
FAN02G0759 Fragaria x ananassa HOM05D002705 ORTHO05D009765 1.2e-31 141.4 165 44.2
Thhalv10017067m.g Eutrema salsugineum HOM05D002705 ORTHO05D009765 3.4e-31 139.8 268 37.3
Os05g0582000 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D009765 4.5e-31 139.4 254 36.2
Aa31LG1G24660 Aethionema arabicum HOM05D000512 ORTHO05D000861 2.2e-30 137.1 241 36.9
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 5.0e-30 136.0 289 30.4
CARHR137970 Cardamine hirsuta HOM05D002705 ORTHO05D009765 2.5e-29 133.7 264 36.7
BcaC02g12424 Brassica carinata HOM05D002705 ORTHO05D009765 4.2e-29 132.9 268 37.3
BolC4t22036H Brassica oleracea HOM05D002705 ORTHO05D009765 4.2e-29 132.9 268 37.3
Sp4g25030 Schrenkiella parvula HOM05D002705 ORTHO05D009765 7.2e-29 132.1 271 36.5
AT2G42900 Arabidopsis thaliana HOM05D002705 ORTHO05D009765 9.4e-29 131.7 251 39.8
Carub.0004s2537 Capsella rubella HOM05D002705 ORTHO05D009765 1.2e-28 131.3 251 37.1
Sabra05G0153700 Salix brachista HOM05D002705 ORTHO05D009765 1.2e-28 131.3 216 40.7
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 2.1e-28 130.6 245 32.2
Sc21g0001660 Simmondsia chinensis HOM05D002705 ORTHO05D009765 3.6e-28 129.8 293 30.4
Zm00001eb297100 Zea mays HOM05D002705 ORTHO05D009765 4.6e-28 129.4 276 33.0
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 6.1e-28 129.0 251 32.3
Ah.11g045780 Amaranthus hybridus HOM05D002705 ORTHO05D009765 4.3e-26 122.9 291 30.6
Zm00001eb344730 Zea mays HOM05D002705 ORTHO05D009765 4.3e-26 122.9 279 31.5
RcHm_v2.0_Chr2g0151591 Rosa chinensis HOM05D002705 ORTHO05D009765 7.4e-26 122.1 161 39.1
CDE09G0375 Ceratophyllum demersum HOM05D002705 ORTHO05D009765 1.3e-25 121.3 232 31.9
PSO017G2465 Papaver somniferum HOM05D002705 ORTHO05D009765 2.2e-25 120.6 257 33.5
ATR0681G391 Amborella trichopoda HOM05D002705 ORTHO05D009765 5.3e-24 115.9 260 31.9
AL4G41540 Arabidopsis lyrata HOM05D002705 ORTHO05D009765 3.2e-21 106.7 163 46.0
TWI59G0299 Tripterygium wilfordii HOM05D002705 ORTHO05D009765 5.5e-21 105.9 169 38.5
unitig_62.g23106 Utricularia gibba HOM05D002705 ORTHO05D009765 6.1e-20 102.4 159 36.5
TAR627G0068 Trochodendron aralioides HOM05D002705 ORTHO05D009765 1.8e-19 100.9 131 41.2
SalBow5G4254 Salvia bowleyana HOM05D002705 ORTHO05D009765 5.2e-11 72.8 296 23.6
CAN.G1546.3 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-11 72.0 134 32.8
RcHm_v2.0_Chr2g0151581 Rosa chinensis HOM05D002705 ORTHO05D009765 5.0e-06 56.2 97 30.9


User provided reference genes

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