Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 2.1e-299 1031.6 516 100.0
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 3.7e-259 897.9 516 88.0
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 1.9e-252 875.5 503 86.5
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 2.8e-219 765.4 511 75.0
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 2.8e-219 765.4 511 74.4
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 4.7e-214 748.0 513 73.3
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 1.2e-212 743.4 504 74.4
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 1.8e-210 736.1 502 73.7
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 9.5e-207 723.8 511 69.9
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 2.8e-206 722.2 544 68.2
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 8.0e-206 720.7 532 68.6
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 1.4e-205 719.9 530 69.1
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 3.0e-205 718.8 532 68.2
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 1.2e-204 716.8 522 69.5
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 7.5e-204 714.1 534 68.4
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 1.7e-203 713.0 512 69.5
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 2.2e-203 712.6 523 68.1
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 1.4e-202 709.9 544 67.6
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 1.8e-202 709.5 505 69.9
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 7.8e-201 704.1 550 66.4
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 1.0e-200 703.7 532 67.5
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 1.3e-200 703.4 542 66.6
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 1.3e-200 703.4 537 67.8
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 2.3e-200 702.6 537 67.4
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 2.9e-200 702.2 549 65.8
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 3.3e-199 698.7 533 67.2
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 2.1e-198 696.0 541 66.5
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 6.1e-198 694.5 500 69.6
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 2.0e-196 689.5 541 65.4
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 5.8e-196 688.0 540 67.0
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 1.3e-195 686.8 540 67.0
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 1.3e-195 686.8 543 64.3
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 4.9e-195 684.9 531 66.5
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 8.3e-195 684.1 537 65.7
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 4.1e-194 681.8 540 66.7
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 5.4e-194 681.4 536 65.1
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 9.2e-194 680.6 491 69.2
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 2.0e-193 679.5 534 65.2
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 2.7e-193 679.1 525 66.1
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 3.5e-193 678.7 537 64.6
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 3.5e-193 678.7 534 65.0
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 7.8e-193 677.6 540 64.8
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 1.7e-192 676.4 554 64.8
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 2.3e-192 676.0 532 65.4
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 3.9e-192 675.2 532 65.0
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 6.6e-192 674.5 575 61.9
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 1.1e-191 673.7 488 68.4
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 1.5e-191 673.3 562 63.5
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 7.3e-191 671.0 518 65.6
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 4.7e-190 668.3 493 69.4
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 1.4e-189 666.8 482 69.1
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 5.2e-189 664.8 540 62.4
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 7.5e-188 661.0 527 64.3
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 2.9e-187 659.1 490 68.2
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 6.4e-187 657.9 534 64.0
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 6.4e-187 657.9 544 63.6
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 1.9e-186 656.4 539 62.0
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 5.4e-186 654.8 531 63.5
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.0e-185 652.9 532 64.1
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 6.0e-185 651.4 485 66.0
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 1.9e-183 646.4 532 63.3
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 9.5e-183 644.0 531 63.1
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 9.5e-183 644.0 461 69.0
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 1.2e-182 643.7 530 63.0
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 2.1e-182 642.9 529 62.6
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 6.8e-181 637.9 527 63.6
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 1.7e-179 633.3 533 61.0
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 1.1e-178 630.6 485 65.6
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 1.9e-178 629.8 438 72.8
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 9.2e-178 627.5 470 67.4
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 2.1e-177 626.3 530 61.9
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 2.3e-176 622.9 522 62.3
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 5.1e-176 621.7 548 60.0
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 1.1e-173 614.0 539 60.1
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 1.1e-173 614.0 539 60.1
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 1.4e-173 613.6 541 60.4
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 3.1e-173 612.5 541 60.4
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 5.8e-172 608.2 535 59.4
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 8.4e-171 604.4 415 72.0
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 7.6e-164 581.3 530 57.7
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 4.6e-161 572.0 534 58.1
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 2.2e-155 553.1 538 57.1
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 4.9e-155 552.0 527 57.7
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 8.7e-152 541.2 553 56.1
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 5.6e-151 538.5 519 56.1
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 2.4e-149 533.1 323 80.5
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 2.0e-148 530.0 521 54.5
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 7.1e-138 495.0 502 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 6.9e-133 478.4 462 53.2
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 1.2e-132 477.6 503 49.7
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 9.4e-130 468.0 357 67.2
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 2.1e-129 466.8 352 67.6
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 6.3e-126 455.3 499 49.3
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 5.0e-123 445.7 310 71.9
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 2.5e-122 443.4 469 49.0
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 1.6e-108 397.5 474 47.7
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 1.0e-104 384.8 332 61.7
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 1.4e-93 347.8 264 65.9
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 3.3e-74 283.5 220 64.1
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 4.7e-73 279.6 200 68.0
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 6.4e-54 216.1 241 47.3
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 4.9e-46 189.9 574 27.5
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 1.9e-42 177.9 136 61.8
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 7.6e-39 166.0 116 65.5
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 1.7e-30 138.3 105 61.0
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 1.1e-29 135.6 132 55.3
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 1.4e-29 135.2 86 75.6
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.4e-29 135.2 102 63.7
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 7.1e-29 132.9 166 45.8
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 1.9e-26 124.8 291 32.3
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 3.3e-26 124.0 291 32.0
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 1.1e-24 119.0 107 54.2
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.4e-24 118.6 109 55.0
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 2.9e-22 110.9 134 48.5
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 4.1e-16 90.5 127 43.3
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 4.1e-16 90.5 137 40.1
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 6.9e-16 89.7 63 68.3
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 4.3e-10 70.5 283 24.7
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 5.3e-08 63.5 151 32.5
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 5.3e-08 63.5 151 32.5
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 2.6e-07 61.2 34 79.4


User provided reference genes

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