Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 9.6e-127 456.8 230 100.0
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 8.6e-59 231.1 195 64.6
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 5.6e-34 148.7 198 44.4
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 8.1e-33 144.8 196 41.8
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 2.0e-31 140.2 197 46.2
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 4.4e-31 139.0 197 40.6
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 8.4e-30 134.8 197 41.6
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 1.4e-29 134.0 198 39.9
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.9e-29 133.7 184 40.8
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 2.4e-29 133.3 159 47.8
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 5.4e-29 132.1 202 44.1
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 1.2e-28 131.0 191 39.8
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 3.5e-28 129.4 195 47.2
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 3.5e-28 129.4 136 46.3
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 4.6e-28 129.0 148 46.6
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 6.0e-28 128.6 136 46.3
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.7e-27 127.1 191 38.7
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 2.3e-27 126.7 200 40.5
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 5.1e-27 125.6 199 37.2
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 1.1e-26 124.4 191 39.3
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.1e-26 124.4 192 43.8
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.1e-26 124.4 192 43.8
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.1e-26 124.4 192 43.8
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 1.9e-26 123.6 194 38.1
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 7.3e-26 121.7 197 37.1
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 7.3e-26 121.7 195 40.0
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 1.3e-25 120.9 133 48.1
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 1.3e-25 120.9 133 48.1
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 1.3e-25 120.9 133 48.1
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 2.1e-25 120.2 137 45.3
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 2.1e-25 120.2 196 38.3
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 2.1e-25 120.2 134 54.5
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 3.6e-25 119.4 135 43.7
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 4.8e-25 119.0 141 44.0
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 1.1e-24 117.9 133 46.6
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 1.8e-24 117.1 134 43.3
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 2.4e-24 116.7 141 49.6
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 2.4e-24 116.7 135 54.1
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 3.1e-24 116.3 138 47.8
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 5.3e-24 115.5 141 49.6
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 6.9e-24 115.2 199 44.2
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 9.0e-24 114.8 172 43.6
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 9.0e-24 114.8 144 43.8
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.5e-23 114.0 190 38.4
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 2.0e-23 113.6 191 35.6
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 3.4e-23 112.8 120 46.7
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 7.6e-23 111.7 198 40.4
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.7e-22 110.5 137 43.1
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 2.2e-22 110.2 138 43.5
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 2.9e-22 109.8 138 42.8
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 2.9e-22 109.8 143 41.3
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 8.4e-22 108.2 138 43.5
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 1.9e-21 107.1 189 37.0
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 2.4e-21 106.7 137 42.3
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 2.4e-21 106.7 197 36.5
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 3.2e-21 106.3 141 48.9
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 3.2e-21 106.3 136 44.1
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 4.2e-21 105.9 190 38.9
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 7.1e-21 105.1 212 41.0
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 9.3e-21 104.8 133 46.6
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 1.6e-20 104.0 190 38.9
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 1.6e-20 104.0 141 48.2
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 3.5e-20 102.8 134 43.3
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 3.5e-20 102.8 139 48.9
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 4.6e-20 102.4 137 39.4
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 4.6e-20 102.4 134 41.8
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 4.6e-20 102.4 100 50.0
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 7.8e-20 101.7 136 43.4
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 7.8e-20 101.7 104 47.1
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 1.0e-19 101.3 133 49.6
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 1.3e-19 100.9 133 43.6
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.3e-19 100.9 105 47.6
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 2.3e-19 100.1 194 39.7
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 3.0e-19 99.8 136 49.3
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 3.9e-19 99.4 145 46.9
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 3.9e-19 99.4 105 47.6
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 1.1e-18 97.8 151 43.0
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.9e-18 97.1 129 42.6
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.9e-18 97.1 108 47.2
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 3.3e-18 96.3 134 48.5
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 3.3e-18 96.3 136 46.3
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 5.6e-18 95.5 139 48.2
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.3e-17 94.4 107 44.9
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 3.6e-17 92.8 102 44.1
ECA248G1721 Erigeron canadensis HOM05D007181 ORTHO05D008722 4.8e-17 92.4 100 58.0
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 1.4e-16 90.9 104 44.2
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 1.4e-16 90.9 139 41.7
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 3.1e-16 89.7 101 43.6
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 3.1e-16 89.7 93 47.3
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 4.0e-16 89.4 134 46.3
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 4.0e-16 89.4 142 31.7
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 6.9e-16 88.6 105 44.8
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 1.5e-15 87.4 134 39.6
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 2.0e-15 87.0 103 44.7
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 3.4e-15 86.3 187 36.4
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 9.9e-15 84.7 121 47.9
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.3e-14 84.3 133 34.6
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 2.9e-14 83.2 131 38.2
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 2.9e-14 83.2 142 33.1
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 4.9e-14 82.4 102 42.2
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 3.2e-13 79.7 104 43.3
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 9.3e-13 78.2 103 42.7
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 1.1e-08 64.7 133 39.8
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 2.4e-08 63.5 101 36.6
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.7e-06 57.4 72 45.8
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 3.8e-06 56.2 152 27.0


User provided reference genes

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