Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0004351 Helianthus annuus HOM05D000581 ORTHO05D221546 9.2e-90 333.6 173 100.0
HanXRQChr04g0112931 Helianthus annuus HOM05D000581 ORTHO05D000412 6.8e-08 61.6 57 59.6
Lsat_1_v5_gn_1_4101 Lactuca sativa HOM05D000581 ORTHO05D000412 6.8e-08 61.6 41 73.2
Lsat_1_v5_gn_9_44680 Lactuca sativa HOM05D000581 ORTHO05D000412 8.8e-08 61.2 64 51.6
ECA247G2450 Erigeron canadensis HOM05D000581 ORTHO05D000412 1.2e-07 60.8 57 57.9
PSO210G5583 Papaver somniferum HOM05D000581 ORTHO05D000412 1.2e-07 60.8 64 48.4
PSO832G2860 Papaver somniferum HOM05D000581 ORTHO05D000412 1.2e-07 60.8 64 48.4
Actinidia05735 Actinidia chinensis HOM05D000581 ORTHO05D000412 2.0e-07 60.1 41 70.7
Actinidia30898 Actinidia chinensis HOM05D000581 ORTHO05D000412 2.0e-07 60.1 41 70.7
HanXRQChr11g0321011 Helianthus annuus HOM05D000581 ORTHO05D000412 2.0e-07 60.1 64 51.6
ATR0012G044 Amborella trichopoda HOM05D000581 ORTHO05D000412 2.6e-07 59.7 41 70.7
Hma1.2p1_0209F.1_g089310 Hydrangea macrophylla HOM05D000581 ORTHO05D000412 2.6e-07 59.7 41 70.7
Actinidia00719 Actinidia chinensis HOM05D000581 ORTHO05D000412 4.4e-07 58.9 54 59.3
Nitab4.5_0006816g0020 Nicotiana tabacum HOM05D000581 ORTHO05D000412 4.4e-07 58.9 59 52.5
Cc01_g19940 Coffea canephora HOM05D000581 ORTHO05D000412 5.7e-07 58.5 56 55.4
HanXRQChr02g0058621 Helianthus annuus HOM05D000581 ORTHO05D000412 5.7e-07 58.5 40 70.0
TAR362G1287 Trochodendron aralioides HOM05D000581 ORTHO05D000412 5.7e-07 58.5 45 62.2
TAR636G3222 Trochodendron aralioides HOM05D000581 ORTHO05D000412 5.7e-07 58.5 38 71.1
CSS0031946 Camellia sinensis var. sinensis HOM05D000581 ORTHO05D000412 7.5e-07 58.2 41 68.3
Dinv32975 Davidia involucrata HOM05D000581 ORTHO05D000412 7.5e-07 58.2 41 68.3
Dinv38343 Davidia involucrata HOM05D000581 ORTHO05D000412 7.5e-07 58.2 41 68.3
Dinv40236 Davidia involucrata HOM05D000581 ORTHO05D000412 7.5e-07 58.2 41 68.3
Nitab4.5_0003058g0010 Nicotiana tabacum HOM05D000581 ORTHO05D000412 9.8e-07 57.8 59 52.5
TAR633G0981 Trochodendron aralioides HOM05D000581 ORTHO05D000412 9.8e-07 57.8 41 68.3
CSS0037717 Camellia sinensis var. sinensis HOM05D000581 ORTHO05D000412 1.3e-06 57.4 41 65.9
Dinv11276 Davidia involucrata HOM05D000581 ORTHO05D000412 1.3e-06 57.4 41 65.9
Dinv22921 Davidia involucrata HOM05D000581 ORTHO05D000412 1.3e-06 57.4 41 68.3
Nn3g21209 Nelumbo nucifera HOM05D000581 ORTHO05D000412 1.3e-06 57.4 43 65.1
Migut.N02131 Erythranthe guttata HOM05D000581 ORTHO05D000412 1.7e-06 57.0 43 65.1
Hma1.2p1_1651F.1_g295730 Hydrangea macrophylla HOM05D000581 ORTHO05D000412 1.7e-06 57.0 41 68.3
Manes.05G071000 Manihot esculenta HOM05D000581 ORTHO05D000412 1.7e-06 57.0 30 86.7
TAR365G0048 Trochodendron aralioides HOM05D000581 ORTHO05D000412 1.7e-06 57.0 41 68.3
GSVIVG01011043001 Vitis vinifera HOM05D000581 ORTHO05D000412 1.7e-06 57.0 30 86.7
CANSAT25G3313 Cannabis sativa HOM05D000581 ORTHO05D000412 2.2e-06 56.6 62 46.8
SEGI_16835 Sequoiadendron giganteum HOM05D000581 ORTHO05D000412 2.2e-06 56.6 73 43.8
CiPaw.08G168000 Carya illinoinensis HOM05D000581 ORTHO05D000412 2.8e-06 56.2 64 48.4
MBI04_g20304_MAGBIO Magnolia biondii HOM05D000581 ORTHO05D000412 2.8e-06 56.2 50 50.0
QL12p023127 Quercus lobata HOM05D000581 ORTHO05D000412 2.8e-06 56.2 38 68.4
TWI09G0272 Tripterygium wilfordii HOM05D000581 ORTHO05D000412 2.8e-06 56.2 41 65.9
Atru.chr5.1313 Acer truncatum HOM05D000581 ORTHO05D000412 3.7e-06 55.8 30 80.0
CSS0009481 Camellia sinensis var. sinensis HOM05D000581 ORTHO05D000412 3.7e-06 55.8 41 65.9
Dinv44450 Davidia involucrata HOM05D000581 ORTHO05D000412 3.7e-06 55.8 41 65.9
Eucgr.H04435 Eucalyptus grandis HOM05D000581 ORTHO05D000412 3.7e-06 55.8 55 49.1
Potri.005G040400 Populus trichocarpa HOM05D000581 ORTHO05D000412 3.7e-06 55.8 41 63.4
Potri.006G098200 Populus trichocarpa HOM05D000581 ORTHO05D000412 3.7e-06 55.8 32 78.1
unitig_22.g6691 Utricularia gibba HOM05D000581 ORTHO05D000412 3.7e-06 55.8 43 60.5
GSVIVG01017840001 Vitis vinifera HOM05D000581 ORTHO05D000412 3.7e-06 55.8 41 65.9
CANSAT54G2902 Cannabis sativa HOM05D000581 ORTHO05D000412 4.9e-06 55.5 41 65.9
Duzib128G2008 Durio zibethinus HOM05D000581 ORTHO05D000412 4.9e-06 55.5 41 63.4
Gohir.A11G260800 Gossypium hirsutum HOM05D000581 ORTHO05D000412 4.9e-06 55.5 41 63.4
Gohir.D11G271200 Gossypium hirsutum HOM05D000581 ORTHO05D000412 4.9e-06 55.5 41 63.4
Gorai.007G291700 Gossypium raimondii HOM05D000581 ORTHO05D000412 4.9e-06 55.5 41 63.4
Lalb_Chr02g0148471 Lupinus albus HOM05D000581 ORTHO05D000412 4.9e-06 55.5 64 46.9
Potri.016G113500 Populus trichocarpa HOM05D000581 ORTHO05D000412 4.9e-06 55.5 32 78.1
Rhsim07G0178400 Rhododendron simsii HOM05D000581 ORTHO05D000412 4.9e-06 55.5 32 78.1
Sabra16G0108900 Salix brachista HOM05D000581 ORTHO05D000412 4.9e-06 55.5 32 78.1
Glyma.10G157800 Glycine max HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
Gohir.A13G172600 Gossypium hirsutum HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
Gohir.D13G178400 Gossypium hirsutum HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
Gorai.013G203600 Gossypium raimondii HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
Potri.008G197600 Populus trichocarpa HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 68.3
Potri.010G027100 Populus trichocarpa HOM05D000581 ORTHO05D000412 6.3e-06 55.1 64 51.6
Potri.013G028300 Populus trichocarpa HOM05D000581 ORTHO05D000412 6.3e-06 55.1 38 65.8
Sabra05G0039400 Salix brachista HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
Sabra13G0028800 Salix brachista HOM05D000581 ORTHO05D000412 6.3e-06 55.1 38 65.8
SalBow6G4026 Salvia bowleyana HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
Hund20619 Selenicereus undatus HOM05D000581 ORTHO05D000412 6.3e-06 55.1 32 78.1
vmacro05044 Vaccinium macrocarpon HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
GSVIVG01022018001 Vitis vinifera HOM05D000581 ORTHO05D000412 6.3e-06 55.1 41 63.4
MSTRG.12581 Avicennia marina HOM05D000581 ORTHO05D000412 8.3e-06 54.7 41 63.4
CiPaw.07G012800 Carya illinoinensis HOM05D000581 ORTHO05D000412 8.3e-06 54.7 41 63.4
CiPaw.08G101300 Carya illinoinensis HOM05D000581 ORTHO05D000412 8.3e-06 54.7 41 63.4
Haze_04262 Corylus avellana HOM05D000581 ORTHO05D000412 8.3e-06 54.7 41 63.4
Glyma.13G212800 Glycine max HOM05D000581 ORTHO05D000412 8.3e-06 54.7 62 45.2
Lsat_1_v5_gn_0_13221 Lactuca sativa HOM05D000581 ORTHO05D000412 8.3e-06 54.7 64 46.9
Manes.09G161800 Manihot esculenta HOM05D000581 ORTHO05D000412 8.3e-06 54.7 41 63.4
Peaxi162Scf00006g03911 Petunia axillaris HOM05D000581 ORTHO05D000412 8.3e-06 54.7 42 61.9
Prupe.8G249400 Prunus persica HOM05D000581 ORTHO05D000412 8.3e-06 54.7 38 65.8
QL06p006489 Quercus lobata HOM05D000581 ORTHO05D000412 8.3e-06 54.7 38 68.4
Sabra08G0162700 Salix brachista HOM05D000581 ORTHO05D000412 8.3e-06 54.7 64 51.6


User provided reference genes

Program Settings