Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 1.7e-246 855.5 433 100.0
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.1e-191 672.5 435 79.3
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 8.8e-182 640.6 435 75.2
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 8.6e-177 624.0 433 72.5
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 1.1e-176 623.6 426 73.7
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 4.2e-176 621.7 434 72.4
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 8.9e-174 614.0 431 72.9
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 5.4e-171 604.7 433 69.5
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.0e-170 602.8 438 70.8
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 2.3e-169 599.4 430 69.3
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 1.1e-168 597.0 431 69.6
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 7.3e-168 594.3 428 69.6
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 9.5e-168 594.0 432 68.8
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.6e-167 593.2 433 67.4
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 1.6e-167 593.2 437 69.6
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 3.6e-167 592.0 433 67.4
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 6.1e-167 591.3 434 68.0
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 1.0e-166 590.5 434 69.1
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.4e-166 590.1 432 67.4
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.8e-166 589.7 434 68.9
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 2.3e-166 589.3 428 69.6
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.1e-166 589.0 434 68.9
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 4.0e-166 588.6 435 68.7
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.2e-165 587.0 436 68.1
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 1.2e-165 587.0 433 68.8
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 1.5e-165 586.6 436 68.1
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 1.5e-165 586.6 435 71.3
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.5e-165 586.6 432 66.0
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 2.6e-165 585.9 432 68.1
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 2.6e-165 585.9 431 69.8
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 2.6e-165 585.9 434 68.9
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 3.4e-165 585.5 427 67.7
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 4.4e-165 585.1 437 69.1
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 4.4e-165 585.1 430 68.8
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 7.5e-165 584.3 428 68.9
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 7.5e-165 584.3 439 67.4
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.3e-164 583.6 428 68.9
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.7e-164 583.2 428 69.4
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 1.7e-164 583.2 434 66.4
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 2.2e-164 582.8 435 67.1
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 2.2e-164 582.8 425 68.7
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 4.9e-164 581.6 427 69.1
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 8.3e-164 580.9 426 69.0
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.9e-163 579.7 436 67.7
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.2e-163 578.9 429 69.2
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 3.2e-163 578.9 432 67.6
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 3.2e-163 578.9 429 68.5
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 7.0e-163 577.8 433 67.2
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 1.2e-162 577.0 432 67.6
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 3.5e-162 575.5 430 69.1
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 3.5e-162 575.5 434 65.7
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 3.5e-162 575.5 428 68.7
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 4.6e-162 575.1 429 68.1
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 6.0e-162 574.7 441 66.7
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 7.8e-162 574.3 455 66.2
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 1.7e-161 573.2 431 67.7
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 3.0e-161 572.4 437 66.8
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 3.9e-161 572.0 437 68.0
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 8.6e-161 570.9 440 66.4
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 2.1e-159 566.2 428 67.5
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 2.8e-159 565.8 433 65.8
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.4e-158 563.5 423 68.8
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 2.3e-158 562.8 431 66.8
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 2.3e-158 562.8 437 64.3
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 5.2e-158 561.6 427 69.1
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.3e-156 557.0 423 65.5
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.7e-156 556.6 431 64.5
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 8.3e-156 554.3 429 65.7
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.6e-154 550.1 432 64.1
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.7e-154 549.3 426 64.6
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 6.0e-154 548.1 435 64.4
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.7e-153 546.6 430 64.0
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.3e-153 546.2 440 64.1
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 6.6e-153 544.7 430 62.6
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 6.6e-153 544.7 462 62.1
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 8.6e-153 544.3 430 62.6
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 8.6e-153 544.3 432 62.7
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 8.6e-153 544.3 435 64.4
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 3.6e-151 538.9 431 60.8
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 4.7e-151 538.5 432 61.6
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 1.4e-150 537.0 441 62.1
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 1.8e-150 536.6 429 62.0
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.5e-149 533.5 439 63.1
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 7.5e-149 531.2 424 62.3
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 7.5e-149 531.2 424 62.3
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 1.7e-148 530.0 424 62.0
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 1.7e-148 530.0 424 62.0
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.4e-147 526.9 495 59.2
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 2.4e-147 526.2 431 63.1
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 4.6e-146 521.9 434 60.4
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.7e-145 520.0 447 62.0
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.2e-141 507.3 444 60.6
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.2e-141 507.3 340 76.5
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 9.9e-141 504.2 361 69.8
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 2.9e-140 502.7 449 59.7
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 8.4e-140 501.1 432 59.7
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 2.1e-138 496.5 348 72.7
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.5e-136 489.6 377 64.5
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 9.6e-136 487.6 426 61.3
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.7e-132 476.9 338 69.5
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.2e-122 444.1 445 57.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 1.0e-121 441.0 347 65.1
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 6.7e-121 438.3 434 54.8
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 7.4e-120 434.9 360 62.5
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 9.3e-115 417.9 429 50.3
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 1.0e-113 414.5 427 49.4
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 3.9e-113 412.5 428 48.4
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 1.9e-112 410.2 305 67.5
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 5.7e-112 408.7 329 64.1
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 2.8e-111 406.4 294 71.4
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.4e-110 404.1 424 49.1
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 3.0e-89 333.2 450 42.7
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 3.1e-86 323.2 302 53.6
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.7e-77 292.0 200 73.5
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.9e-75 287.3 272 58.1
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 9.4e-67 258.5 213 59.2
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 5.2e-65 252.7 240 52.1
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 2.9e-39 167.2 400 31.5
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.4e-39 166.0 156 52.6
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.9e-30 137.9 102 66.7
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-30 135.6 205 41.0
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 4.4e-24 116.7 115 47.0
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 1.3e-18 98.6 62 74.2
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 5.3e-17 93.2 111 40.5
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.4e-16 90.1 92 54.3
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 4.4e-16 90.1 97 42.3
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 9.6e-11 72.4 57 54.4
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 4.0e-09 67.0 39 79.5
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 9.3e-06 55.8 37 64.9


User provided reference genes

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