Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 4.3e-118 427.9 207 100.0
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 1.5e-65 253.4 151 81.5
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 1.5e-65 253.4 151 81.5
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 2.5e-65 252.7 151 81.5
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 4.2e-65 251.9 151 80.8
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 9.4e-65 250.8 151 80.1
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 1.6e-64 250.0 151 79.5
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 4.7e-64 248.4 151 80.8
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 6.1e-64 248.1 151 78.1
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 8.0e-64 247.7 151 79.5
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 5.2e-63 245.0 162 75.3
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 8.8e-63 244.2 154 77.9
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 1.2e-62 243.8 151 78.8
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 1.5e-62 243.4 151 78.8
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 2.6e-62 242.7 151 77.5
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 7.5e-62 241.1 155 76.1
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 9.7e-62 240.7 162 80.2
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 1.3e-61 240.4 153 75.8
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 3.7e-61 238.8 142 82.4
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 6.3e-61 238.0 151 76.8
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 6.3e-61 238.0 150 74.0
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 8.2e-61 237.7 152 77.6
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 1.8e-60 236.5 151 74.2
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 2.4e-60 236.1 151 77.5
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 5.3e-60 235.0 151 76.2
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 5.3e-60 235.0 151 75.5
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 9.1e-60 234.2 151 73.5
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 9.1e-60 234.2 153 73.2
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 1.2e-59 233.8 152 77.6
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 1.2e-59 233.8 152 73.0
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 2.0e-59 233.0 153 75.2
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 2.7e-59 232.6 153 72.5
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 3.5e-59 232.3 151 74.8
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 7.7e-59 231.1 151 75.5
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 7.7e-59 231.1 151 75.5
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 7.7e-59 231.1 152 75.0
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 1.7e-58 229.9 151 75.5
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 1.7e-58 229.9 152 76.3
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 1.7e-58 229.9 151 74.2
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 2.9e-58 229.2 151 74.2
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 2.9e-58 229.2 151 74.8
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 3.8e-58 228.8 152 74.3
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 3.8e-58 228.8 152 74.3
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 5.0e-58 228.4 151 75.5
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 5.0e-58 228.4 151 75.5
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 8.5e-58 227.6 152 70.4
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 8.5e-58 227.6 152 70.4
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 1.9e-57 226.5 151 74.2
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 4.2e-57 225.3 152 70.4
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 4.2e-57 225.3 147 72.8
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 5.5e-57 224.9 151 74.8
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 5.5e-57 224.9 151 72.2
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 7.2e-57 224.6 152 74.3
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 7.2e-57 224.6 151 71.5
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 9.4e-57 224.2 151 74.8
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 9.4e-57 224.2 153 73.9
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 1.2e-56 223.8 153 71.2
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 2.1e-56 223.0 152 72.4
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 2.1e-56 223.0 152 69.7
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 2.7e-56 222.6 152 71.1
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 2.7e-56 222.6 153 73.2
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 2.7e-56 222.6 151 74.8
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 3.6e-56 222.2 153 72.5
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 4.7e-56 221.9 145 72.4
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 8.0e-56 221.1 151 71.5
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 1.0e-55 220.7 151 70.2
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 1.8e-55 219.9 151 70.2
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.8e-55 219.9 152 72.4
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 2.3e-55 219.5 152 68.4
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 2.3e-55 219.5 151 71.5
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 3.0e-55 219.2 151 69.5
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 3.0e-55 219.2 152 71.1
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 3.0e-55 219.2 152 69.1
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 4.0e-55 218.8 155 71.0
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 5.2e-55 218.4 151 69.5
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 5.2e-55 218.4 150 71.3
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 5.2e-55 218.4 151 69.5
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 5.2e-55 218.4 151 68.2
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 5.2e-55 218.4 152 67.8
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 5.2e-55 218.4 151 70.2
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 8.8e-55 217.6 151 68.9
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 1.2e-54 217.2 151 72.2
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 1.5e-54 216.9 152 67.8
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 2.0e-54 216.5 151 69.5
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 2.0e-54 216.5 152 68.4
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.6e-54 216.1 151 69.5
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 3.4e-54 215.7 151 69.5
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 4.4e-54 215.3 153 71.2
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 5.7e-54 214.9 158 68.4
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 5.7e-54 214.9 151 68.9
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 7.5e-54 214.5 151 68.2
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 9.8e-54 214.2 151 68.9
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 1.3e-53 213.8 151 67.5
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 2.2e-53 213.0 138 73.9
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 2.2e-53 213.0 152 69.1
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 4.8e-53 211.8 151 66.9
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 4.8e-53 211.8 152 71.1
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 6.3e-53 211.5 152 69.1
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 8.3e-53 211.1 153 66.7
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.1e-52 210.7 155 69.0
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 1.4e-52 210.3 152 67.8
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 2.4e-52 209.5 151 68.2
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 2.4e-52 209.5 151 65.6
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 3.1e-52 209.1 152 67.1
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.2e-51 207.2 137 72.3
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 1.2e-51 207.2 137 72.3
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.6e-51 206.8 152 67.8
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 2.7e-51 206.1 153 68.0
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 3.5e-51 205.7 137 71.5
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 7.7e-51 204.5 152 67.8
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 7.7e-51 204.5 145 67.6
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 1.3e-50 203.8 153 66.7
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 2.3e-50 203.0 136 69.9
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 2.3e-50 203.0 149 66.4
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 3.8e-50 202.2 135 74.1
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 3.8e-50 202.2 117 79.5
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 6.5e-50 201.4 151 67.5
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 6.5e-50 201.4 151 66.2
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 6.5e-50 201.4 151 66.2
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 8.6e-50 201.1 151 66.9
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 8.6e-50 201.1 151 66.9
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 1.1e-49 200.7 155 65.2
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 7.2e-49 198.0 151 63.6
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 2.1e-48 196.4 156 62.8
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 2.8e-48 196.1 155 63.2
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 2.8e-48 196.1 155 63.2
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 2.8e-48 196.1 155 63.2
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 4.7e-48 195.3 155 61.9
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 4.7e-48 195.3 155 61.9
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 8.0e-48 194.5 153 62.7
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 8.0e-48 194.5 153 62.7
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 8.0e-48 194.5 153 62.7
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 1.0e-47 194.1 155 63.2
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 2.3e-47 193.0 155 64.5
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 3.0e-47 192.6 155 62.6
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 4.0e-47 192.2 152 65.1
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 3.4e-46 189.1 130 70.0
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 5.7e-46 188.3 150 62.7
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 1.3e-45 187.2 135 70.4
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 6.3e-45 184.9 149 62.4
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 2.7e-43 179.5 129 66.7
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 1.0e-42 177.6 139 66.2
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 1.3e-42 177.2 151 64.2
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 2.6e-38 162.9 151 58.3
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 1.2e-35 154.1 101 72.3
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 1.0e-34 151.0 149 58.4
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 4.3e-33 145.6 97 73.2
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 1.6e-32 143.7 101 68.3
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 2.1e-32 143.3 151 54.3
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 3.6e-32 142.5 141 53.9
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 5.2e-23 112.1 110 50.0
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 1.4e-20 104.0 68 77.9
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 1.0e-18 97.8 76 68.4
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 6.6e-18 95.1 131 48.1
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 4.7e-16 89.0 117 41.0
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 4.3e-09 65.9 85 37.6
arahy.Tifrunner.gnm1.ann1.RHW5C7 Arachis hypogaea HOM05D017329 ORTHO05D005474 5.6e-09 65.5 47 66.0
PRCOL_00007052 Prasinoderma coloniale HOM05D004660 ORTHO05D005474 4.0e-07 59.3 66 40.9


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