Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0002531 Helianthus annuus HOM05D004361 ORTHO05D004706 1.6e-92 342.8 179 100.0
ECA248G1765 Erigeron canadensis HOM05D004361 ORTHO05D004706 2.3e-51 206.1 184 66.8
HanXRQChr11g0339041 Helianthus annuus HOM05D004361 ORTHO05D004706 2.5e-42 176.0 175 61.1
Lsat_1_v5_gn_4_57760 Lactuca sativa HOM05D004361 ORTHO05D004706 3.6e-28 129.0 179 50.8
HanXRQChr16g0516371 Helianthus annuus HOM05D004361 ORTHO05D004706 8.5e-22 107.8 166 43.4
Haze_06732 Corylus avellana HOM05D004361 ORTHO05D004706 1.6e-20 103.6 155 47.1
Haze_06736 Corylus avellana HOM05D004361 ORTHO05D004706 4.7e-20 102.1 155 46.5
Dinv17836 Davidia involucrata HOM05D004361 ORTHO05D004706 4.7e-20 102.1 170 45.3
CSS0045436 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 8.0e-20 101.3 171 45.6
Lsat_1_v5_gn_1_123061 Lactuca sativa HOM05D004361 ORTHO05D004706 1.5e-18 97.1 177 40.1
Cfa000279 Carpinus fangiana HOM05D004361 ORTHO05D004706 4.4e-18 95.5 155 43.9
CAN.G569.44 Capsicum annuum HOM05D004361 ORTHO05D004706 5.7e-18 95.1 168 45.2
CSS0034427 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 7.5e-18 94.7 187 40.1
QL05p075222 Quercus lobata HOM05D004361 ORTHO05D004706 7.5e-18 94.7 184 38.6
Prupe.4G026600 Prunus persica HOM05D004361 ORTHO05D004706 9.8e-18 94.4 160 41.9
MD05G1340800 Malus domestica HOM05D004361 ORTHO05D004706 4.8e-17 92.0 155 44.5
RcHm_v2.0_Chr5g0004031 Rosa chinensis HOM05D004361 ORTHO05D004706 8.3e-17 91.3 156 43.6
MD10G1314300 Malus domestica HOM05D004361 ORTHO05D004706 1.1e-16 90.9 161 42.9
TWI38G1626 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 7.0e-16 88.2 160 44.4
PGSC0003DMG400002067 Solanum tuberosum HOM05D004361 ORTHO05D004706 2.0e-15 86.7 160 44.4
Manes.16G012800 Manihot esculenta HOM05D004361 ORTHO05D004706 2.7e-15 86.3 170 41.8
Thecc.06G213600 Theobroma cacao HOM05D004361 ORTHO05D004706 2.7e-15 86.3 170 38.2
Actinidia14236 Actinidia chinensis HOM05D004361 ORTHO05D004706 4.5e-15 85.5 168 40.5
Potri.011G026900 Populus trichocarpa HOM05D004361 ORTHO05D004706 4.5e-15 85.5 189 41.3
MSTRG.7243 Avicennia marina HOM05D004361 ORTHO05D004706 7.7e-15 84.7 158 40.5
Gohir.D06G213000 Gossypium hirsutum HOM05D004361 ORTHO05D004706 1.7e-14 83.6 180 39.4
Sabra04G0012700 Salix brachista HOM05D004361 ORTHO05D004706 1.7e-14 83.6 166 41.0
MSTRG.15964 Avicennia marina HOM05D004361 ORTHO05D004706 2.9e-14 82.8 163 42.9
Gorai.010G253100 Gossypium raimondii HOM05D004361 ORTHO05D004706 3.8e-14 82.4 189 39.2
Solyc02g080110.3 Solanum lycopersicum HOM05D004361 ORTHO05D004706 3.8e-14 82.4 159 41.5
Actinidia11836 Actinidia chinensis HOM05D004361 ORTHO05D004706 5.0e-14 82.0 170 40.0
Gohir.A06G208100 Gossypium hirsutum HOM05D004361 ORTHO05D004706 5.0e-14 82.0 157 40.8
COL.COLO4_31721 Corchorus olitorius HOM05D004361 ORTHO05D004706 6.5e-14 81.6 170 40.6
Nitab4.5_0006795g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 8.5e-14 81.3 168 39.9
Actinidia05535 Actinidia chinensis HOM05D004361 ORTHO05D004706 1.1e-13 80.9 187 40.1
CiPaw.09G086700 Carya illinoinensis HOM05D004361 ORTHO05D004706 1.1e-13 80.9 152 41.4
arahy.Tifrunner.gnm1.ann1.F31F99 Arachis hypogaea HOM05D004361 ORTHO05D004706 1.5e-13 80.5 164 37.8
Lalb_Chr16g0376351 Lupinus albus HOM05D004361 ORTHO05D004706 1.5e-13 80.5 159 41.5
FvH4_3g02690 Fragaria vesca HOM05D004361 ORTHO05D004706 1.9e-13 80.1 156 40.4
Migut.M01277 Erythranthe guttata HOM05D004361 ORTHO05D004706 2.5e-13 79.7 166 39.8
FAN21G0156 Fragaria x ananassa HOM05D004361 ORTHO05D004706 2.5e-13 79.7 154 40.9
Sopen02g024830 Solanum pennellii HOM05D004361 ORTHO05D004706 2.5e-13 79.7 157 42.0
Duzib192G0487 Durio zibethinus HOM05D004361 ORTHO05D004706 3.2e-13 79.3 172 40.1
Phvul.007G051800 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 3.2e-13 79.3 162 38.9
Actinidia26950 Actinidia chinensis HOM05D004361 ORTHO05D004706 4.2e-13 79.0 158 40.5
Sopen10g001370 Solanum pennellii HOM05D004361 ORTHO05D004706 4.2e-13 79.0 162 42.6
SGA_v2.0_scaffold114G32021 Striga asiatica HOM05D004361 ORTHO05D004706 4.2e-13 79.0 151 42.4
FAN25G3407 Fragaria x ananassa HOM05D004361 ORTHO05D004706 9.4e-13 77.8 156 40.4
CANSAT56G2280 Cannabis sativa HOM05D004361 ORTHO05D004706 1.2e-12 77.4 152 40.8
Lalb_Chr02g0144581 Lupinus albus HOM05D004361 ORTHO05D004706 1.6e-12 77.0 173 38.2
Peaxi162Scf00678g00313 Petunia axillaris HOM05D004361 ORTHO05D004706 1.6e-12 77.0 161 42.9
Duzib235G0682 Durio zibethinus HOM05D004361 ORTHO05D004706 2.1e-12 76.6 172 36.6
Glyma.10G252400 Glycine max HOM05D004361 ORTHO05D004706 2.1e-12 76.6 166 39.8
VMungo0720G0988 Vigna mungo HOM05D004361 ORTHO05D004706 2.1e-12 76.6 163 37.4
vmacro03710 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 2.7e-12 76.3 188 37.2
MSTRG.13161 Avicennia marina HOM05D004361 ORTHO05D004706 3.6e-12 75.9 176 38.6
Glyma.20G141000 Glycine max HOM05D004361 ORTHO05D004706 3.6e-12 75.9 166 39.8
Hma1.2p1_0091F.1_g046140 Hydrangea macrophylla HOM05D004361 ORTHO05D004706 4.7e-12 75.5 170 40.6
TWI38G0935 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 4.7e-12 75.5 169 40.8
Glyma.11G003100 Glycine max HOM05D004361 ORTHO05D004706 6.1e-12 75.1 163 39.3
Lj5g0000713 Lotus japonicus HOM05D004361 ORTHO05D004706 6.1e-12 75.1 164 37.8
Manes.17G034800 Manihot esculenta HOM05D004361 ORTHO05D004706 6.1e-12 75.1 168 41.1
Gohir.A06G145600 Gossypium hirsutum HOM05D004361 ORTHO05D004706 8.0e-12 74.7 157 37.6
TAR626G1160 Trochodendron aralioides HOM05D004361 ORTHO05D004706 1.0e-11 74.3 152 41.4
GSVIVG01012625001 Vitis vinifera HOM05D004361 ORTHO05D004706 1.0e-11 74.3 169 43.8
Sc05g0008860 Simmondsia chinensis HOM05D004361 ORTHO05D004706 1.4e-11 73.9 164 41.5
TAR629G1557 Trochodendron aralioides HOM05D004361 ORTHO05D004706 2.3e-11 73.2 169 39.6
vmacro15833 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 2.3e-11 73.2 172 40.1
Potri.004G023000 Populus trichocarpa HOM05D004361 ORTHO05D004706 3.0e-11 72.8 192 36.5
Gohir.D06G151500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 5.2e-11 72.0 159 39.6
Oeu002714.1 Olea europaea HOM05D004361 ORTHO05D004706 1.5e-10 70.5 188 35.1
Sc17g0007070 Simmondsia chinensis HOM05D004361 ORTHO05D004706 1.5e-10 70.5 148 37.2
Eucgr.D00816 Eucalyptus grandis HOM05D004361 ORTHO05D004706 2.0e-10 70.1 176 39.8
Gorai.010G176700 Gossypium raimondii HOM05D004361 ORTHO05D004706 2.6e-10 69.7 159 39.0
CiPaw.10G068100 Carya illinoinensis HOM05D004361 ORTHO05D004706 4.4e-10 68.9 172 34.3
Cc00_g17930 Coffea canephora HOM05D004361 ORTHO05D004706 4.4e-10 68.9 165 37.0
DCAR_008122 Daucus carota HOM05D004361 ORTHO05D004706 4.4e-10 68.9 135 39.3
Cpa.g.sc198.2 Carica papaya HOM05D004361 ORTHO05D004706 7.5e-10 68.2 168 36.9
Medtr1g105555 Medicago truncatula HOM05D004361 ORTHO05D004706 9.8e-10 67.8 159 34.6
Glyma.01G240500 Glycine max HOM05D004361 ORTHO05D004706 2.2e-09 66.6 165 37.6
Gohir.A10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.9e-09 65.5 149 31.5
Lalb_Chr21g0307851 Lupinus albus HOM05D004361 ORTHO05D004706 2.4e-08 63.2 167 36.5
Medtr5g005560 Medicago truncatula HOM05D004361 ORTHO05D004706 3.1e-08 62.8 163 37.4
Sabra11G0017100 Salix brachista HOM05D004361 ORTHO05D004706 4.1e-08 62.4 148 37.8
Hund21376 Selenicereus undatus HOM05D004361 ORTHO05D004706 4.1e-08 62.4 165 39.4
BcaC09g51243 Brassica carinata HOM05D004361 ORTHO05D004706 5.4e-08 62.0 181 35.9
A03p52710 Brassica napus HOM05D004361 ORTHO05D004706 5.4e-08 62.0 175 34.3
PGR004G2667 Punica granatum HOM05D004361 ORTHO05D004706 5.4e-08 62.0 159 35.8
Rhsim02G0112300 Rhododendron simsii HOM05D004361 ORTHO05D004706 5.4e-08 62.0 165 37.0
arahy.Tifrunner.gnm1.ann1.QUZ1HU Arachis hypogaea HOM05D004361 ORTHO05D004706 7.0e-08 61.6 133 36.1
Gohir.D10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 7.0e-08 61.6 152 30.9
Gorai.011G017100 Gossypium raimondii HOM05D004361 ORTHO05D004706 7.0e-08 61.6 152 30.9
Psat4g215200 Pisum sativum HOM05D004361 ORTHO05D004706 7.0e-08 61.6 159 35.8
BolC1t01465H Brassica oleracea HOM05D004361 ORTHO05D004706 9.1e-08 61.2 181 35.9
Lj1g0002529 Lotus japonicus HOM05D004361 ORTHO05D004706 9.1e-08 61.2 173 32.9
Aqoxy4G01997 Aquilegia oxysepala HOM05D004361 ORTHO05D004706 1.2e-07 60.8 154 39.0
C07p51140 Brassica napus HOM05D004361 ORTHO05D004706 1.2e-07 60.8 175 34.3
Nitab4.5_0002847g0010 Nicotiana tabacum HOM05D004361 ORTHO05D004706 1.2e-07 60.8 146 39.0
BcaNung00863 Brassica carinata HOM05D004361 ORTHO05D004706 1.6e-07 60.5 175 34.3
A01p12590 Brassica napus HOM05D004361 ORTHO05D004706 1.6e-07 60.5 181 35.9
BolC7t45614H Brassica oleracea HOM05D004361 ORTHO05D004706 1.6e-07 60.5 175 34.3
BraA01t01202Z Brassica rapa HOM05D004361 ORTHO05D004706 1.6e-07 60.5 181 35.9
arahy.Tifrunner.gnm1.ann1.Y6FWJK Arachis hypogaea HOM05D004361 ORTHO05D004706 2.0e-07 60.1 131 35.9
BraA03t14345Z Brassica rapa HOM05D004361 ORTHO05D004706 3.5e-07 59.3 175 33.7
THA.LOC104806260 Tarenaya hassleriana HOM05D004361 ORTHO05D004706 3.5e-07 59.3 168 32.7
Nitab4.5_0001686g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 5.9e-07 58.5 142 39.4
Psat6g210400 Pisum sativum HOM05D004361 ORTHO05D004706 5.9e-07 58.5 162 35.2
TPR.G5469 Trifolium pratense HOM05D004361 ORTHO05D004706 5.9e-07 58.5 157 33.8
VMungo1215G1007 Vigna mungo HOM05D004361 ORTHO05D004706 7.7e-07 58.2 168 35.1
Sed0010653 Sechium edule HOM05D004361 ORTHO05D004706 1.0e-06 57.8 181 31.5
BcaNung03832 Brassica carinata HOM05D004361 ORTHO05D004706 1.3e-06 57.4 178 35.4
DCAR_004190 Daucus carota HOM05D004361 ORTHO05D004706 1.3e-06 57.4 133 44.4
ClCG03G005000 Citrullus lanatus HOM05D004361 ORTHO05D004706 1.7e-06 57.0 170 31.2
MBI02_g10098_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 1.7e-06 57.0 154 34.4
AL7G32890 Arabidopsis lyrata HOM05D004361 ORTHO05D004706 2.3e-06 56.6 181 35.4
MBI18_g06808_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 2.9e-06 56.2 145 33.8
Oeu030986.1 Olea europaea HOM05D004361 ORTHO05D004706 2.9e-06 56.2 57 56.1
SalBow1G7297 Salvia bowleyana HOM05D004361 ORTHO05D004706 2.9e-06 56.2 67 50.7
MELO3C002485.2 Cucumis melo HOM05D004361 ORTHO05D004706 5.0e-06 55.5 179 30.2
Sp7g19310 Schrenkiella parvula HOM05D004361 ORTHO05D004706 5.0e-06 55.5 181 33.1
TPR.G8297 Trifolium pratense HOM05D004361 ORTHO05D004706 5.0e-06 55.5 199 32.2
Carub.0007s2020 Capsella rubella HOM05D004361 ORTHO05D004706 6.6e-06 55.1 183 32.2
Phvul.002G049100 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 6.6e-06 55.1 163 33.1
AT4G21215 Arabidopsis thaliana HOM05D004361 ORTHO05D004706 8.6e-06 54.7 181 33.1
Os07g0530700 Oryza sativa ssp. japonica HOM05D035907 ORTHO05D004706 8.6e-06 54.7 63 47.6


User provided reference genes

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