Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 8.3e-38 159.8 79 100.0
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 7.8e-20 100.1 76 69.7
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 1.3e-19 99.4 76 69.7
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-19 99.4 76 69.7
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-19 99.4 76 69.7
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-19 99.4 76 69.7
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-19 99.4 76 69.7
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-19 99.4 76 69.7
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-19 99.4 76 69.7
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 1.7e-19 99.0 76 69.7
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 2.3e-19 98.6 76 68.4
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 2.3e-19 98.6 76 68.4
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.3e-19 98.6 76 68.4
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.0e-19 98.2 76 68.4
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.0e-19 98.2 76 68.4
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 3.9e-19 97.8 76 67.1
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 5.1e-19 97.4 76 67.1
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 5.1e-19 97.4 76 67.1
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 6.6e-19 97.1 75 69.3
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 6.6e-19 97.1 75 69.3
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 6.6e-19 97.1 74 68.9
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 6.6e-19 97.1 76 67.1
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 6.6e-19 97.1 76 67.1
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 6.6e-19 97.1 76 67.1
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 6.6e-19 97.1 76 67.1
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 6.6e-19 97.1 76 65.8
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 6.6e-19 97.1 76 65.8
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 6.6e-19 97.1 76 65.8
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 8.7e-19 96.7 76 67.1
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 8.7e-19 96.7 76 67.1
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 8.7e-19 96.7 76 67.1
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 1.1e-18 96.3 76 67.1
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 1.5e-18 95.9 76 65.8
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 1.9e-18 95.5 76 67.1
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 2.5e-18 95.1 73 68.5
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 3.3e-18 94.7 73 67.1
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 4.3e-18 94.4 76 65.8
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 5.6e-18 94.0 76 67.1
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 1.3e-17 92.8 76 63.2
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.3e-17 92.8 76 64.5
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 6.2e-17 90.5 64 71.9
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-16 89.4 68 69.1
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 5.3e-16 87.4 76 63.2
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 2.0e-15 85.5 62 67.7
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 2.6e-15 85.1 79 59.5
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 1.3e-14 82.8 54 74.1
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 2.9e-14 81.6 69 63.8
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 3.8e-14 81.3 54 72.2
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 9.3e-13 76.6 76 56.6
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 7.9e-12 73.6 52 71.2
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 3.9e-11 71.2 40 82.5
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 3.9e-11 71.2 64 60.9
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 3.9e-11 71.2 36 91.7
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 6.7e-11 70.5 74 54.1
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 1.9e-10 68.9 55 63.6
CARHR060450 Cardamine hirsuta HOM05D000533 ORTHO05D002807 2.8e-09 65.1 38 78.9
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 3.7e-09 64.7 75 42.7
Eucgr.B03250 Eucalyptus grandis HOM05D000533 ORTHO05D002807 3.7e-09 64.7 54 63.0
Gohir.D11G334101 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.7e-09 64.7 55 61.8
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 8.1e-09 63.5 56 60.7
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 8.1e-09 63.5 38 81.6
Nitab4.5_0017884g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.4e-08 62.8 59 55.9
Nitab4.5_0001313g0090 Nicotiana tabacum HOM05D000533 ORTHO05D002807 9.0e-08 60.1 62 50.0
arahy.Tifrunner.gnm1.ann1.KIF45B Arachis hypogaea HOM05D000533 ORTHO05D002807 1.5e-07 59.3 30 90.0
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 2.0e-07 58.9 65 50.8
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 2.0e-07 58.9 65 50.8
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 2.0e-07 58.9 65 50.8
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 2.0e-07 58.9 65 50.8
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 1.7e-06 55.8 39 71.8
Gohir.D04G093016 Gossypium hirsutum HOM05D000533 ORTHO05D002807 8.4e-06 53.5 27 92.6


User provided reference genes

Program Settings