Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 6.7e-60 233.8 117 100.0
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 9.1e-57 223.4 112 99.1
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.2e-51 206.5 104 99.0
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 9.4e-46 186.8 108 82.4
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.4e-36 156.4 108 70.4
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 5.9e-32 141.0 110 63.6
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 2.9e-31 138.7 110 61.8
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 2.5e-30 135.6 110 60.9
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 7.3e-30 134.0 110 60.9
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 1.2e-29 133.3 110 60.9
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 2.1e-29 132.5 108 60.2
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 2.1e-29 132.5 108 60.2
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 2.8e-29 132.1 110 60.0
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 4.7e-29 131.3 110 58.2
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 4.7e-29 131.3 109 59.6
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 6.1e-29 131.0 109 58.7
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 6.1e-29 131.0 110 58.2
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 6.1e-29 131.0 110 58.2
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 8.0e-29 130.6 108 60.2
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 8.0e-29 130.6 111 58.6
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.0e-28 130.2 108 57.4
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 1.4e-28 129.8 110 57.3
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 1.8e-28 129.4 108 59.3
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.8e-28 129.4 103 61.2
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.8e-28 129.4 108 61.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 2.3e-28 129.0 110 58.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 3.0e-28 128.6 108 55.6
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 4.0e-28 128.3 110 59.1
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.0e-28 128.3 110 55.5
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 5.2e-28 127.9 110 58.2
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 5.2e-28 127.9 125 50.4
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 6.8e-28 127.5 108 56.5
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 6.8e-28 127.5 108 56.5
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 8.9e-28 127.1 108 54.6
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 8.9e-28 127.1 106 56.6
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 8.9e-28 127.1 110 58.2
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.2e-27 126.7 108 58.3
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.2e-27 126.7 104 59.6
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.2e-27 126.7 104 57.7
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.0e-27 125.9 108 56.5
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.0e-27 125.9 108 56.5
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 2.0e-27 125.9 110 56.4
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.0e-27 125.9 108 54.6
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 2.6e-27 125.6 110 56.4
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.6e-27 125.6 104 58.7
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 3.4e-27 125.2 108 59.3
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 3.4e-27 125.2 111 55.9
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 4.4e-27 124.8 108 59.3
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 4.4e-27 124.8 110 53.6
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 4.4e-27 124.8 108 56.5
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 4.4e-27 124.8 108 52.8
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 5.8e-27 124.4 108 54.6
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 5.8e-27 124.4 110 56.4
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 5.8e-27 124.4 110 55.5
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 7.5e-27 124.0 110 54.5
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 9.8e-27 123.6 108 52.8
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 9.8e-27 123.6 110 52.7
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.3e-26 123.2 110 54.5
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.3e-26 123.2 111 55.9
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.7e-26 122.9 104 56.7
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.7e-26 122.9 110 54.5
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 2.2e-26 122.5 108 55.6
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.2e-26 122.5 104 55.8
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.2e-26 122.5 104 55.8
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 2.9e-26 122.1 110 55.5
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.9e-26 122.1 110 52.7
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.9e-26 121.3 110 51.8
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.9e-26 121.3 110 51.8
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 8.3e-26 120.6 110 51.8
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 1.1e-25 120.2 108 54.6
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 2.4e-25 119.0 104 53.8
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 5.4e-25 117.9 104 52.9
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 5.4e-25 117.9 110 55.5
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 5.4e-25 117.9 109 58.7
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 1.6e-24 116.3 104 58.7
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 3.5e-24 115.2 113 51.3
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 3.5e-24 115.2 105 56.2
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 7.8e-24 114.0 111 52.3
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.0e-23 113.6 110 50.0
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 3.9e-23 111.7 110 51.8
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 6.6e-23 110.9 105 51.4
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.1e-22 110.2 82 64.6
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.1e-22 110.2 109 53.2
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.1e-22 110.2 104 49.0
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.3e-22 108.6 108 54.6
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 3.3e-22 108.6 111 51.4
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 5.6e-22 107.8 105 50.5
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 7.3e-22 107.5 109 47.7
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.6e-21 106.3 118 48.3
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 1.8e-20 102.8 113 49.6
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 3.4e-19 98.6 105 50.5
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 2.9e-18 95.5 143 38.5
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.9e-18 95.5 105 52.4
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 6.4e-18 94.4 104 50.0
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 6.4e-18 94.4 104 50.0
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 4.1e-17 91.7 110 44.5
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 6.0e-16 87.8 104 45.2
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.3e-15 86.7 72 56.9
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 8.1e-13 77.4 69 53.6
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 2.0e-11 72.8 104 41.3
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 7.5e-11 70.9 110 35.5
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 8.3e-10 67.4 91 39.6
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 1.1e-09 67.0 110 32.7
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 3.2e-09 65.5 53 60.4
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.6e-08 63.2 103 35.9
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 6.0e-08 61.2 58 58.6
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.0e-07 60.5 108 34.3
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.3e-06 55.5 49 51.0
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 9.5e-06 53.9 45 51.1


User provided reference genes

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