Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 5.0e-154 547.7 277 100.0
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 3.5e-147 525.0 265 100.0
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 4.1e-108 395.2 277 75.5
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 7.1e-92 341.3 257 67.3
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 1.6e-91 340.1 195 87.2
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.5e-91 339.0 242 69.8
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 3.9e-90 335.5 244 68.4
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 6.6e-90 334.7 238 70.6
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.1e-89 334.0 238 71.0
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 7.3e-89 331.3 245 69.8
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 2.1e-88 329.7 242 67.8
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 3.6e-88 328.9 221 72.9
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 4.0e-87 325.5 241 68.0
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 5.3e-87 325.1 223 73.5
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 6.9e-87 324.7 289 61.2
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 2.6e-86 322.8 231 69.3
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 2.6e-86 322.8 231 69.3
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 9.9e-86 320.9 223 71.3
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 6.4e-85 318.2 255 65.9
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 6.4e-85 318.2 264 61.4
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.9e-84 316.6 225 70.2
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 4.2e-84 315.5 246 63.0
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 2.1e-83 313.2 225 70.7
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 3.5e-83 312.4 230 67.0
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 6.0e-83 311.6 243 66.3
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 7.9e-83 311.2 252 61.5
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 7.9e-83 311.2 228 67.5
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 7.9e-83 311.2 237 62.9
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 1.0e-82 310.8 268 60.1
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.0e-82 310.8 231 65.4
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.0e-82 310.8 237 63.3
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 1.7e-82 310.1 275 58.9
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.7e-82 310.1 268 60.1
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.7e-82 310.1 285 58.2
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.3e-82 309.7 235 64.3
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.3e-82 309.7 238 62.2
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.3e-82 309.7 280 56.1
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 3.9e-82 308.9 237 65.8
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 5.1e-82 308.5 231 65.8
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 6.6e-82 308.1 242 63.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 6.6e-82 308.1 246 62.2
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 8.7e-82 307.8 268 59.3
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.9e-81 306.6 271 58.7
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.9e-81 306.6 229 65.1
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.3e-80 303.9 257 60.3
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.6e-80 303.5 250 61.6
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 4.8e-80 302.0 228 65.4
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 8.1e-80 301.2 275 58.2
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 8.1e-80 301.2 232 65.1
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.4e-79 300.4 253 60.5
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.8e-79 300.1 229 63.8
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 3.1e-79 299.3 239 62.8
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 4.0e-79 298.9 258 59.3
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 5.3e-79 298.5 254 61.4
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 6.9e-79 298.1 230 64.3
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 2.0e-78 296.6 224 66.5
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 4.5e-78 295.4 234 61.1
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 5.8e-78 295.0 262 57.6
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 9.9e-78 294.3 261 58.2
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.3e-77 293.9 228 63.6
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 4.9e-77 292.0 224 64.3
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 8.4e-77 291.2 229 64.2
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 8.4e-77 291.2 263 57.4
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.1e-76 290.8 228 61.8
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.4e-76 290.4 241 63.1
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 1.9e-76 290.0 247 60.3
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.4e-76 289.7 224 63.8
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 5.5e-76 288.5 228 64.0
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 7.1e-76 288.1 247 59.9
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 2.1e-75 286.6 231 62.3
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 2.1e-75 286.6 266 57.5
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 6.0e-75 285.0 224 62.5
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.3e-74 283.9 253 58.9
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 1.8e-74 283.5 256 56.6
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 6.7e-74 281.6 241 60.6
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 5.6e-73 278.5 238 60.9
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.3e-72 277.3 302 50.3
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.6e-72 276.9 230 60.9
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 4.8e-72 275.4 191 70.2
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 6.9e-71 271.6 229 62.4
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 9.3e-68 261.2 202 64.4
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 6.0e-67 258.5 248 54.8
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.3e-66 256.5 240 56.2
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.3e-64 250.8 224 58.9
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 2.0e-62 243.4 266 52.3
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.0e-62 243.4 216 59.3
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 5.9e-62 241.9 278 48.9
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.2e-59 234.2 229 54.6
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.2e-56 223.4 112 99.1
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 2.1e-51 206.8 173 59.0
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 6.1e-51 205.3 153 68.0
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 7.9e-51 204.9 221 49.3
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.4e-50 204.1 251 46.6
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.5e-49 200.7 142 69.7
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.7e-49 198.7 193 54.9
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 1.8e-47 193.7 153 62.7
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 9.1e-47 191.4 165 58.8
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.0e-45 188.0 223 46.2
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 2.9e-45 186.4 154 64.3
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 3.8e-45 186.0 220 47.3
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 1.1e-44 184.5 234 44.0
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 3.9e-42 176.0 154 57.1
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 6.7e-42 175.3 147 61.9
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.8e-34 150.6 201 44.3
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.3e-34 150.2 114 65.8
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.4e-31 141.0 117 59.8
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 2.4e-31 140.2 117 60.7
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.0e-30 137.1 117 55.6
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.7e-24 117.5 123 56.1
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 8.3e-24 115.2 91 59.3
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.5e-22 109.4 103 57.3
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.1e-15 86.7 72 56.9
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.8e-06 55.5 49 51.0


User provided reference genes

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