Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0572g0575991 Helianthus annuus HOM05D000729 ORTHO05D001063 7.0e-54 213.8 113 100.0
HanXRQChr00c0533g0575531 Helianthus annuus HOM05D000729 ORTHO05D001063 8.3e-39 163.7 86 97.7
Nn241s45687 Nelumbo nucifera HOM05D000729 ORTHO05D001063 1.3e-36 156.4 115 77.4
Lalb_Chr12g0206641 Lupinus albus HOM05D000729 ORTHO05D001063 8.5e-36 153.7 111 79.3
Nitab4.5_0004929g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 4.2e-35 151.4 110 77.3
Gohir.D02G117466 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.6e-34 149.4 86 90.7
AL1G51260 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 6.8e-33 144.1 101 81.2
AL7G44080 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 6.8e-33 144.1 101 81.2
Gohir.A05G323796 Gossypium hirsutum HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Hma1.2p1_0052F.1_g030753 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Hma1.2p1_0052F.1_g030756 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Hma1.2p1_1244F.1_g270050 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Hma1.2p1_1244F.1_g270060 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Nn029s41589 Nelumbo nucifera HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Nn206s45070 Nelumbo nucifera HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Nn219s45285 Nelumbo nucifera HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Nn233s45562 Nelumbo nucifera HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Nn269s46006 Nelumbo nucifera HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
PSO548G0058 Papaver somniferum HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
PSO548G0065 Papaver somniferum HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
PGR111G0104 Punica granatum HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
PGR111G0125 Punica granatum HOM05D000729 ORTHO05D001063 6.8e-33 144.1 98 82.7
Lsat_1_v5_gn_3_92301 Lactuca sativa HOM05D000729 ORTHO05D001063 8.8e-33 143.7 98 83.7
Lsat_1_v5_gn_9_18660 Lactuca sativa HOM05D000729 ORTHO05D001063 8.8e-33 143.7 98 83.7
CAN.G1191.10 Capsicum annuum HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr00c0264g0572891 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr00c0386g0574421 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr00c0434g0574661 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr00c0554g0575661 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr00c0788g0577381 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr01g0020151 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr05g0150471 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr05g0152351 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr05g0152491 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr10g0284481 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr10g0317951 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr11g0321181 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr11g0327111 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr11g0333791 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr12g0369921 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr13g0416581 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQChr13g0418941 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 100 81.0
HanXRQChr17g0569661 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQCPg0580271 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
HanXRQCPg0580451 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-32 143.3 98 82.7
AL2G21870 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 1.5e-32 142.9 101 80.2
ATCG00890 Arabidopsis thaliana HOM05D000729 ORTHO05D001063 1.5e-32 142.9 101 80.2
ATCG01250 Arabidopsis thaliana HOM05D000729 ORTHO05D001063 1.5e-32 142.9 101 80.2
CAN.G1148.5 Capsicum annuum HOM05D000729 ORTHO05D001063 2.0e-32 142.5 98 82.7
RcHm_v2.0_Chr2g0118411 Rosa chinensis HOM05D000729 ORTHO05D001063 2.0e-32 142.5 98 80.6
RcHm_v2.0_Chr5g0051111 Rosa chinensis HOM05D000729 ORTHO05D001063 2.0e-32 142.5 97 80.4
RcHm_v2.0_CPg0501771 Rosa chinensis HOM05D000729 ORTHO05D001063 2.0e-32 142.5 97 80.4
RcHm_v2.0_CPg0502641 Rosa chinensis HOM05D000729 ORTHO05D001063 2.0e-32 142.5 97 80.4
CAN.G1045.7 Capsicum annuum HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 82.7
CAN.G1875.3 Capsicum annuum HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 82.7
CAN.G21.56 Capsicum annuum HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 82.7
CAN.G267.19 Capsicum annuum HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 82.7
CAN.G343.3 Capsicum annuum HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 82.7
CAN.G547.17 Capsicum annuum HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 82.7
Lalb_Chr07g0191911 Lupinus albus HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 81.6
SalBow1G3941 Salvia bowleyana HOM05D000729 ORTHO05D001063 2.6e-32 142.1 100 83.0
SalBow1G4562 Salvia bowleyana HOM05D000729 ORTHO05D001063 2.6e-32 142.1 100 83.0
SalBow1G6647 Salvia bowleyana HOM05D000729 ORTHO05D001063 2.6e-32 142.1 100 83.0
Sed0001647 Sechium edule HOM05D000729 ORTHO05D001063 2.6e-32 142.1 98 81.6
Gorai.003G150500 Gossypium raimondii HOM05D000729 ORTHO05D001063 3.4e-32 141.7 98 81.6
QL93p0823_0001 Quercus lobata HOM05D000729 ORTHO05D001063 3.4e-32 141.7 98 80.6
BolSC29t60494H Brassica oleracea HOM05D000729 ORTHO05D001063 4.4e-32 141.4 101 80.2
BolSC29t60537H Brassica oleracea HOM05D000729 ORTHO05D001063 4.4e-32 141.4 101 80.2
BolSC45t60922H Brassica oleracea HOM05D000729 ORTHO05D001063 4.4e-32 141.4 101 80.2
BolSC47t61055H Brassica oleracea HOM05D000729 ORTHO05D001063 4.4e-32 141.4 101 80.2
BraSC103t45436Z Brassica rapa HOM05D000729 ORTHO05D001063 4.4e-32 141.4 101 80.2
BraSC25t45897Z Brassica rapa HOM05D000729 ORTHO05D001063 4.4e-32 141.4 101 80.2
BraSC59t46561Z Brassica rapa HOM05D000729 ORTHO05D001063 4.4e-32 141.4 101 80.2
CSS0038723 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 4.4e-32 141.4 98 82.7
HanXRQChr03g0064311 Helianthus annuus HOM05D000729 ORTHO05D001063 4.4e-32 141.4 99 81.8
HanXRQChr00c0451g0574811 Helianthus annuus HOM05D000729 ORTHO05D001063 5.7e-32 141.0 74 98.6
HanXRQChr17g0567651 Helianthus annuus HOM05D000729 ORTHO05D001063 5.7e-32 141.0 74 98.6
Solyc00g500146.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.5e-32 140.6 98 81.6
Gohir.D01G101839 Gossypium hirsutum HOM05D000729 ORTHO05D001063 9.8e-32 140.2 98 80.6
DCAR_032530 Daucus carota HOM05D000729 ORTHO05D001063 1.3e-31 139.8 98 81.6
DCAR_032546 Daucus carota HOM05D000729 ORTHO05D001063 1.3e-31 139.8 98 81.6
Lj2P1238T95 Lonicera japonica HOM05D000729 ORTHO05D001063 1.3e-31 139.8 98 81.6
Lj2P1239T117 Lonicera japonica HOM05D000729 ORTHO05D001063 1.3e-31 139.8 98 81.6
arahy.Tifrunner.gnm1.ann1.8IFR8Y Arachis hypogaea HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
arahy.Tifrunner.gnm1.ann1.A85ADF Arachis hypogaea HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
arahy.Tifrunner.gnm1.ann1.FU0XIN Arachis hypogaea HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
arahy.Tifrunner.gnm1.ann1.NGJ0AN Arachis hypogaea HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
arahy.Tifrunner.gnm1.ann1.NIYG2M Arachis hypogaea HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
arahy.Tifrunner.gnm1.ann1.S6TNUT Arachis hypogaea HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
EL10Ac5g11886 Beta vulgaris HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
Gohir.A09G046338 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.7e-31 139.4 74 97.3
Gohir.A11G180330 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 80.6
Lalb_Chr05g0227471 Lupinus albus HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 79.6
Medtr3g035660 Medicago truncatula HOM05D000729 ORTHO05D001063 1.7e-31 139.4 98 77.6
Gohir.A02G077402 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.2e-31 139.0 98 80.6
Phvul.003G089803 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 2.2e-31 139.0 98 79.6
Phvul.009G090284 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 2.2e-31 139.0 98 79.6
EL10As15g24113 Beta vulgaris HOM05D000729 ORTHO05D001063 2.8e-31 138.7 98 80.6
CAN.G1021.15 Capsicum annuum HOM05D000729 ORTHO05D001063 2.8e-31 138.7 100 79.0
FAN24G1010 Fragaria x ananassa HOM05D000729 ORTHO05D001063 2.8e-31 138.7 97 78.4
LjContig00489g0003974 Lotus japonicus HOM05D000729 ORTHO05D001063 2.8e-31 138.7 100 82.0
Medtr0002s0310 Medicago truncatula HOM05D000729 ORTHO05D001063 4.9e-31 137.9 98 78.6
Gohir.D06G107201 Gossypium hirsutum HOM05D000729 ORTHO05D001063 6.3e-31 137.5 97 78.4
BraSC59t46538Z Brassica rapa HOM05D000729 ORTHO05D001063 8.3e-31 137.1 98 79.6
Migut.D01404 Erythranthe guttata HOM05D000729 ORTHO05D001063 8.3e-31 137.1 77 93.5
Solyc09g050069.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 8.3e-31 137.1 112 72.3
BraSC103t45493Z Brassica rapa HOM05D000729 ORTHO05D001063 1.1e-30 136.7 102 79.4
Oeu012825.1 Olea europaea HOM05D000729 ORTHO05D001063 1.4e-30 136.3 105 77.1
arahy.Tifrunner.gnm1.ann1.R4S00L Arachis hypogaea HOM05D000729 ORTHO05D001063 2.4e-30 135.6 98 77.6
LjContig00319g0001918 Lotus japonicus HOM05D000729 ORTHO05D001063 2.4e-30 135.6 98 78.6
Gohir.A08G249972 Gossypium hirsutum HOM05D000729 ORTHO05D001063 4.1e-30 134.8 98 80.6
SabraPtG0004800 Salix brachista HOM05D000729 ORTHO05D001063 4.1e-30 134.8 98 77.6
Gorai.010G067500 Gossypium raimondii HOM05D000729 ORTHO05D001063 1.2e-29 133.3 87 81.6
Nitab4.5_0018575g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 2.0e-29 132.5 89 79.8
Cpa.g.sc2.66 Carica papaya HOM05D000729 ORTHO05D001063 3.5e-29 131.7 98 74.5
Potri.011G075051 Populus trichocarpa HOM05D000729 ORTHO05D001063 3.5e-29 131.7 98 75.5
CAN.G262.3 Capsicum annuum HOM05D000729 ORTHO05D001063 5.9e-29 131.0 98 79.6
Lj4g0028091 Lotus japonicus HOM05D000729 ORTHO05D001063 5.9e-29 131.0 98 76.5
arahy.Tifrunner.gnm1.ann1.0BYT70 Arachis hypogaea HOM05D000729 ORTHO05D001063 1.3e-28 129.8 98 78.6
Lsat_1_v5_gn_4_11820 Lactuca sativa HOM05D000729 ORTHO05D001063 1.3e-28 129.8 98 75.5
Solyc11g021090.3 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.7e-28 129.4 99 77.8
EL10As12g24040 Beta vulgaris HOM05D000729 ORTHO05D001063 2.9e-28 128.6 89 78.7
Gorai.003G065500 Gossypium raimondii HOM05D000729 ORTHO05D001063 3.8e-28 128.3 87 78.2
Gohir.D11G234166 Gossypium hirsutum HOM05D000729 ORTHO05D001063 4.3e-27 124.8 74 89.2
Nitab4.5_0001761g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.6e-26 122.9 110 67.3
Glyma.05G094500 Glycine max HOM05D000729 ORTHO05D001063 3.6e-26 121.7 67 92.5
CSS0015256 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 6.1e-26 120.9 70 88.6
Gorai.005G160600 Gossypium raimondii HOM05D000729 ORTHO05D001063 6.1e-26 120.9 98 72.4
Gohir.D02G143001 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.0e-25 120.2 98 71.4
Migut.D01322 Erythranthe guttata HOM05D000729 ORTHO05D001063 6.8e-25 117.5 61 98.4
CARHR282330 Cardamine hirsuta HOM05D000729 ORTHO05D001063 5.7e-24 114.4 61 96.7
CARHR282530 Cardamine hirsuta HOM05D000729 ORTHO05D001063 5.7e-24 114.4 61 96.7
Gorai.007G300800 Gossypium raimondii HOM05D000729 ORTHO05D001063 2.9e-23 112.1 74 82.4
Gohir.D11G278650 Gossypium hirsutum HOM05D000729 ORTHO05D001063 3.7e-23 111.7 74 82.4
AL9U12020 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 8.3e-23 110.5 61 95.1
CSS0022865 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 8.3e-23 110.5 62 90.3
HanXRQChr00c0585g0576201 Helianthus annuus HOM05D000729 ORTHO05D001063 8.3e-23 110.5 81 79.0
Solyc04g039790.3 Solanum lycopersicum HOM05D000729 ORTHO05D001063 8.3e-23 110.5 74 81.1
Solyc09g055840.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.1e-22 110.2 56 98.2
Nitab4.5_0027450g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.8e-22 109.4 58 94.8
Solyc12g027820.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 5.4e-22 107.8 56 96.4
EL10As15g24115 Beta vulgaris HOM05D000729 ORTHO05D001063 1.6e-21 106.3 107 61.7
Solyc01g017260.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 2.7e-21 105.5 74 78.4
Glyma.01G201500 Glycine max HOM05D000729 ORTHO05D001063 3.5e-21 105.1 56 94.6
Hund08789 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.0e-20 103.6 110 60.0
Nitab4.5_0000241g0080 Nicotiana tabacum HOM05D000729 ORTHO05D001063 5.0e-20 101.3 87 71.3
Lalb_Chr04g0260201 Lupinus albus HOM05D000729 ORTHO05D001063 8.6e-20 100.5 71 73.2
arahy.Tifrunner.gnm1.ann1.HJG1UD Arachis hypogaea HOM05D000729 ORTHO05D001063 3.3e-19 98.6 91 64.8
Lalb_Chr25g0281841 Lupinus albus HOM05D000729 ORTHO05D001063 1.2e-18 96.7 56 83.9
TPR.G39041 Trifolium pratense HOM05D000729 ORTHO05D001063 1.6e-18 96.3 86 67.4
EL10Ac8g19099 Beta vulgaris HOM05D000729 ORTHO05D001063 2.1e-18 95.9 57 84.2
Nitab4.5_0005246g0030 Nicotiana tabacum HOM05D000729 ORTHO05D001063 2.1e-18 95.9 78 67.9
EL10As15g24106 Beta vulgaris HOM05D000729 ORTHO05D001063 1.4e-17 93.2 56 83.9
Solyc02g011910.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.2e-16 90.1 53 79.2
Solyc10g061887.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 2.0e-16 89.4 68 76.5
arahy.Tifrunner.gnm1.ann1.IXN31S Arachis hypogaea HOM05D000729 ORTHO05D001063 3.4e-16 88.6 98 61.2
Nitab4.5_0012260g0090 Nicotiana tabacum HOM05D000729 ORTHO05D001063 6.4e-15 84.3 58 81.0
Lsat_1_v5_gn_5_163541 Lactuca sativa HOM05D000729 ORTHO05D001063 1.1e-14 83.6 98 60.2
Migut.D01376 Erythranthe guttata HOM05D000729 ORTHO05D001063 1.9e-14 82.8 50 82.0
Psat0s2011g0040 Pisum sativum HOM05D000729 ORTHO05D001063 3.9e-12 75.1 92 48.9
Peaxi162Scf00080g00517 Petunia axillaris HOM05D000729 ORTHO05D001063 8.6e-12 73.9 85 56.5
HanXRQChr00c0747g0577151 Helianthus annuus HOM05D000729 ORTHO05D001063 1.9e-11 72.8 65 69.2
Nitab4.5_0003706g0020 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.6e-10 69.7 64 65.6
HanXRQChr16g0530791 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-10 68.9 49 81.6
Nitab4.5_0000149g0250 Nicotiana tabacum HOM05D000729 ORTHO05D013759 4.0e-09 65.1 42 78.6
BolSC49t61156H Brassica oleracea HOM05D000729 ORTHO05D001063 8.9e-09 63.9 76 53.9
Nitab4.5_0000705g0090 Nicotiana tabacum HOM05D000729 ORTHO05D001063 2.6e-08 62.4 36 86.1
Lsat_1_v5_gn_3_14201 Lactuca sativa HOM05D000729 ORTHO05D001063 4.4e-08 61.6 36 83.3
arahy.Tifrunner.gnm1.ann1.XJN4MJ Arachis hypogaea HOM05D000729 ORTHO05D001063 7.5e-08 60.8 59 59.3
Solyc01g017160.2 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.5e-08 60.8 32 87.5
Sed0012918 Sechium edule HOM05D000729 ORTHO05D001063 3.7e-07 58.5 35 82.9
HanXRQChr00c0349g0574001 Helianthus annuus HOM05D000729 ORTHO05D001063 7.1e-06 54.3 51 66.7


User provided reference genes

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