Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0368g0574221 Helianthus annuus HOM05D000445 ORTHO05D000314 9.8e-52 206.5 100 100.0
HanXRQChr00c0585g0576251 Helianthus annuus HOM05D000445 ORTHO05D000314 4.4e-44 181.0 88 98.9
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-35 152.1 73 100.0
HanXRQChr00c0448g0574791 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-35 151.0 88 84.1
HanXRQChr10g0317971 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-35 151.0 88 84.1
HanXRQChr11g0333821 Helianthus annuus HOM05D000445 ORTHO05D000314 6.4e-35 150.6 73 98.6
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 1.4e-34 149.4 89 85.4
HanXRQChr00c0126g0571771 Helianthus annuus HOM05D000445 ORTHO05D000314 2.1e-33 145.6 80 87.5
Oeu061855.1 Olea europaea HOM05D000445 ORTHO05D000314 1.3e-32 142.9 83 88.0
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 3.0e-32 141.7 66 100.0
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 2.5e-31 138.7 73 90.4
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 4.3e-31 137.9 73 90.4
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 4.3e-31 137.9 73 90.4
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 9.6e-31 136.7 82 86.6
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.3e-30 136.3 72 91.7
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 2.1e-30 135.6 83 85.5
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.6e-30 134.8 73 90.4
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.8e-30 134.4 72 90.3
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.8e-30 134.4 72 90.3
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.8e-30 134.4 72 90.3
Nn3g16494 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.8e-30 134.4 72 90.3
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 4.8e-30 134.4 72 90.3
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 6.2e-30 134.0 73 89.0
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 6.2e-30 134.0 73 89.0
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 8.1e-30 133.7 73 91.8
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 8.1e-30 133.7 73 91.8
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 8.1e-30 133.7 72 90.3
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 1.8e-29 132.5 69 91.3
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.4e-29 132.1 73 87.7
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 4.0e-29 131.3 72 88.9
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 6.9e-29 130.6 71 87.3
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 6.9e-29 130.6 71 87.3
Nitab4.5_0001761g0240 Nicotiana tabacum HOM05D000445 ORTHO05D000314 9.0e-29 130.2 73 87.7
Nitab4.5_0022403g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.6e-28 128.6 73 86.3
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 4.4e-28 127.9 72 87.5
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 5.8e-28 127.5 71 85.9
BolSC29t60563H Brassica oleracea HOM05D000445 ORTHO05D000314 5.8e-28 127.5 71 85.9
BolSC49t61211H Brassica oleracea HOM05D000445 ORTHO05D000314 5.8e-28 127.5 71 85.9
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 5.8e-28 127.5 71 85.9
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 5.8e-28 127.5 71 85.9
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 5.8e-28 127.5 71 85.9
Oeu012799.1 Olea europaea HOM05D000445 ORTHO05D000314 7.6e-28 127.1 67 86.6
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 9.9e-28 126.7 73 82.2
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 9.9e-28 126.7 73 82.2
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 1.3e-27 126.3 74 85.1
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-27 126.3 72 86.1
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-27 126.3 72 86.1
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-27 126.3 72 86.1
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-27 126.3 72 86.1
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-27 126.3 72 86.1
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-27 126.3 72 86.1
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-27 125.9 85 76.5
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-27 125.9 85 76.5
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-27 125.9 85 76.5
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-27 125.9 85 76.5
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-27 125.9 85 76.5
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 75 80.0
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 1.1e-26 123.2 71 85.9
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 1.9e-26 122.5 71 84.5
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 1.9e-26 122.5 74 82.4
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 1.9e-26 122.5 74 82.4
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 1.9e-26 122.5 73 83.6
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 2.4e-26 122.1 67 89.6
Solyc00g500149.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.2e-26 121.7 73 82.2
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 4.2e-26 121.3 73 83.6
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 4.2e-26 121.3 73 83.6
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 4.2e-26 121.3 67 85.1
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 4.2e-26 121.3 67 85.1
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 4.2e-26 121.3 67 85.1
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 9.3e-26 120.2 67 85.1
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 9.3e-26 120.2 73 80.8
Solyc09g031820.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-25 119.8 72 80.6
Nitab4.5_0023562g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.6e-25 119.4 85 76.5
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 6.0e-25 117.5 67 82.1
Medtr2g019700 Medicago truncatula HOM05D000445 ORTHO05D000314 6.0e-25 117.5 73 74.0
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 6.0e-25 117.5 74 82.4
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 6.0e-25 117.5 71 78.9
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-24 116.3 56 100.0
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 2.3e-24 115.5 68 82.4
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 2.3e-24 115.5 73 79.5
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 2.3e-24 115.5 73 79.5
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 3.0e-24 115.2 84 71.4
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.1e-24 114.4 93 63.4
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 6.6e-24 114.0 74 79.7
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 6.6e-24 114.0 65 81.5
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 6.6e-24 114.0 65 81.5
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 8.7e-24 113.6 60 85.0
Oeu015121.1 Olea europaea HOM05D000445 ORTHO05D000314 8.7e-24 113.6 78 73.1
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 4.3e-23 111.3 82 68.3
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 7.3e-23 110.5 59 93.2
Medtr1g102200 Medicago truncatula HOM05D000445 ORTHO05D000314 7.3e-23 110.5 80 68.8
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 2.8e-22 108.6 88 63.6
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 6.2e-22 107.5 75 77.3
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 6.2e-22 107.5 75 77.3
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 1.4e-21 106.3 49 100.0
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 1.4e-21 106.3 49 100.0
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 1.4e-21 106.3 49 100.0
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-21 105.9 50 100.0
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-21 105.9 50 100.0
Nitab4.5_0004573g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.5e-20 102.8 73 74.0
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 2.0e-20 102.4 52 88.5
CAN.G210.9 Capsicum annuum HOM05D000445 ORTHO05D000314 2.6e-20 102.1 58 82.8
BcaB02g11358 Brassica carinata HOM05D000445 ORTHO05D000314 4.5e-20 101.3 79 64.6
Solyc04g050850.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-19 99.8 57 80.7
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 3.8e-19 98.2 86 61.6
Solyc06g051370.1 Solanum lycopersicum HOM05D000445 ORTHO05D017746 1.1e-18 96.7 58 81.0
Medtr4g047930 Medicago truncatula HOM05D000445 ORTHO05D000314 1.9e-18 95.9 86 60.5
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 7.1e-18 94.0 62 77.4
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 1.6e-17 92.8 53 77.4
AL1G45010 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 1.3e-16 89.7 51 78.4
C09p24760 Brassica napus HOM05D000445 ORTHO05D000314 1.3e-16 89.7 50 80.0
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-15 85.1 44 88.6
Nitab4.5_0007979g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 9.6e-15 83.6 70 61.4
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 1.3e-14 83.2 44 84.1
TPR.G25324 Trifolium pratense HOM05D000445 ORTHO05D015071 1.3e-14 83.2 60 68.3
Actinidia34809 Actinidia chinensis HOM05D000445 ORTHO05D000314 2.1e-14 82.4 91 56.0
Nitab4.5_0003101g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.8e-13 79.3 61 67.2
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 3.1e-13 78.6 71 62.0
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.1e-13 78.6 70 55.7
HanXRQChr00c0788g0577401 Helianthus annuus HOM05D000445 ORTHO05D000314 6.9e-13 77.4 35 100.0
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 1.5e-12 76.3 37 97.3
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 1.5e-12 76.3 37 97.3
BolSC47t61072H Brassica oleracea HOM05D000445 ORTHO05D000314 2.0e-12 75.9 86 57.0
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-12 75.5 76 60.5
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-12 75.5 76 60.5
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-12 75.5 76 60.5
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-12 75.5 76 60.5
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-12 75.5 76 60.5
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-12 75.5 76 60.5
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.6e-12 75.5 76 60.5
Hund19325 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.9e-11 71.2 100 46.0
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.9e-10 69.3 65 60.0
Hund01216 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.2e-10 68.2 44 77.3
Hund26851 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.2e-10 68.2 44 77.3
Hund27472 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.2e-10 68.2 44 77.3
Hund27647 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.2e-10 68.2 44 77.3
Hund29199 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.2e-10 68.2 44 77.3
Hund29397 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.2e-10 68.2 44 77.3
Hund29990 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.2e-10 68.2 44 77.3
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 7.1e-10 67.4 52 67.3
Hund26897 Selenicereus undatus HOM05D000445 ORTHO05D000314 7.1e-10 67.4 43 79.1
Hund29661 Selenicereus undatus HOM05D000445 ORTHO05D000314 7.1e-10 67.4 43 79.1
Hund29851 Selenicereus undatus HOM05D000445 ORTHO05D000314 7.1e-10 67.4 43 79.1
Nitab4.5_0014666g0060 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.7e-08 60.8 37 83.8
Nitab4.5_0007959g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 8.7e-08 60.5 42 66.7
Hund11176 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.2e-06 53.9 38 71.1


User provided reference genes

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