Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 1.4e-306 1055.4 531 100.0
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-306 1055.0 530 100.0
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-306 1055.0 530 100.0
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.1e-281 971.8 530 94.0
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 1.4e-266 922.5 469 98.7
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 3.3e-146 522.7 405 69.1
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 6.0e-140 501.9 240 100.0
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 3.0e-123 446.4 214 100.0
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 5.5e-117 425.6 219 96.8
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 7.4e-114 415.2 200 99.5
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.7e-105 386.3 605 43.0
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.7e-105 386.3 605 43.0
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 6.5e-102 375.6 590 42.4
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.3e-99 367.1 584 42.6
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.2e-97 360.5 614 41.2
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.0e-91 340.1 557 40.9
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 1.5e-90 337.8 498 43.6
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 2.0e-90 337.4 468 43.4
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.1e-84 317.4 435 45.3
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 7.5e-82 308.9 557 37.7
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.7e-81 307.8 551 39.4
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.2e-79 301.6 594 37.9
HanXRQChr15g0465501 Helianthus annuus HOM05D001070 ORTHO05D010233 8.8e-75 285.4 142 100.0
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.7e-73 281.2 630 36.2
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.1e-72 278.5 400 41.8
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 5.4e-72 276.2 146 100.0
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 4.4e-66 256.5 393 41.5
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 6.4e-65 252.7 355 42.8
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 8.0e-60 235.7 496 35.5
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 5.0e-54 216.5 280 44.3
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 8.6e-54 215.7 452 35.8
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.2e-52 211.8 266 45.1
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 1.5e-50 204.9 242 45.0
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 7.8e-47 192.6 286 38.8
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 6.6e-46 189.5 450 32.4
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.4e-43 181.8 385 36.4
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 1.2e-39 168.7 219 47.0
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 3.0e-38 164.1 222 42.3
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 2.6e-34 151.0 258 36.0
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.4e-34 150.2 279 34.8
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 9.9e-34 149.1 341 31.7
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.2e-33 147.9 341 31.7
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.2e-33 147.9 345 31.0
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.2e-33 147.9 341 31.7
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.2e-33 147.9 341 31.7
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 4.9e-33 146.7 72 100.0
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 8.4e-33 146.0 246 39.0
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 7.1e-32 142.9 185 42.7
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 9.3e-32 142.5 123 53.7
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 9.3e-32 142.5 302 35.8
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 3.5e-31 140.6 100 64.0
Oeu058851.1 Olea europaea HOM05D001070 ORTHO05D010233 7.8e-31 139.4 100 62.0
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 1.7e-30 138.3 285 36.1
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.5e-29 134.4 206 36.4
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-28 132.1 67 95.5
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 1.3e-28 132.1 206 36.4
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.6e-28 130.6 226 34.5
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 2.6e-26 124.4 187 47.1
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-25 122.1 172 47.7
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 1.3e-25 122.1 108 52.8
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 3.5e-23 114.0 161 40.4
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 3.5e-23 114.0 232 37.9
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 1.3e-22 112.1 253 36.8
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 3.9e-22 110.5 265 35.8
SEGI_28780 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 3.9e-22 110.5 205 35.1
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 9.6e-21 105.9 148 42.6
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.3e-20 105.5 69 63.8
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.2e-20 103.2 79 64.6
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 5.3e-19 100.1 184 39.7
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 9.0e-19 99.4 212 36.8
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 1.3e-17 95.5 121 44.6
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 2.9e-17 94.4 72 51.4
Psat5g037720 Pisum sativum HOM05D001070 ORTHO05D010233 3.8e-17 94.0 298 28.9
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 3.8e-17 94.0 131 44.3
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 4.2e-16 90.5 107 42.1
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.0e-14 85.9 71 56.3
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.0e-14 85.9 71 54.9
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 1.8e-14 85.1 218 35.8
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.3e-14 84.7 420 26.2
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 5.1e-14 83.6 251 31.9
Glyma.13G038800 Glycine max HOM05D001070 ORTHO05D010233 5.1e-14 83.6 103 42.7
Migut.G01153 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.1e-13 82.4 71 54.9
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 1.3e-12 79.0 131 38.9
Solyc10g049470.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.8e-11 75.1 142 37.3
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 2.4e-11 74.7 63 54.0
GSVIVG01009552001 Vitis vinifera HOM05D001070 ORTHO05D010233 4.0e-11 73.9 118 39.0
Nitab4.5_0000172g2280 Nicotiana tabacum HOM05D001070 ORTHO05D010233 3.4e-10 70.9 85 45.9
Solyc02g011850.3 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.8e-10 70.1 152 36.2
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.7e-09 68.6 126 35.7
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.5e-08 64.7 132 36.4
Nitab4.5_0000729g0030 Nicotiana tabacum HOM05D001070 ORTHO05D010233 3.2e-08 64.3 100 40.0
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-08 63.5 96 42.7
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-08 63.5 96 42.7
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-08 63.5 96 42.7
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 1.2e-07 62.4 75 53.3
Solyc11g021300.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 2.7e-07 61.2 94 40.4
CsaV3_1G025500 Cucumis sativus L. HOM05D001070 ORTHO05D010233 1.3e-06 58.9 105 39.0
Solyc05g016220.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.9e-06 57.4 55 54.5
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 5.1e-06 57.0 49 53.1
Peaxi162Scf00080g00522 Petunia axillaris HOM05D001070 ORTHO05D022991 6.7e-06 56.6 199 28.6


User provided reference genes

Program Settings