Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-69 265.8 129 100.0
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.4e-63 246.1 119 100.0
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 1.4e-63 246.1 119 100.0
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.4e-63 246.1 119 100.0
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 4.8e-59 231.1 119 93.3
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 4.5e-57 224.6 120 93.3
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 6.1e-46 187.6 119 79.8
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 3.0e-45 185.3 128 75.0
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 2.6e-44 182.2 119 79.0
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 7.5e-44 180.6 88 98.9
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.6e-41 172.9 119 73.1
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 2.0e-41 172.6 119 74.8
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 5.0e-40 167.9 119 73.9
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 5.0e-40 167.9 118 73.7
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 8.0e-38 160.6 119 70.6
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.4e-37 159.8 117 70.1
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 2.0e-36 156.0 117 67.5
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 2.6e-36 155.6 115 69.6
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 3.4e-36 155.2 118 67.8
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 4.4e-36 154.8 119 68.9
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-35 153.3 121 66.9
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 3.7e-35 151.8 118 70.3
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-34 150.2 121 66.1
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.8e-34 149.4 115 68.7
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 2.4e-34 149.1 118 69.5
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.1e-34 147.1 119 66.4
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.1e-34 147.1 119 66.4
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 9.1e-34 147.1 118 66.1
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 2.0e-33 146.0 119 67.2
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 3.5e-33 145.2 119 65.5
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 3.5e-33 145.2 119 65.5
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 4.5e-33 144.8 121 65.3
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.5e-31 139.8 104 71.2
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.5e-31 139.8 104 71.2
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.5e-31 139.8 104 71.2
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.5e-31 139.8 104 71.2
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.5e-31 139.8 104 71.2
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 5.5e-31 137.9 118 64.4
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 7.2e-31 137.5 119 63.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 7.2e-31 137.5 119 61.3
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 7.2e-31 137.5 119 61.3
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 7.2e-31 137.5 119 61.3
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 6.8e-29 131.0 99 67.7
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 2.8e-27 125.6 117 57.3
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 6.3e-27 124.4 107 59.8
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 2.0e-25 119.4 118 55.1
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 1.3e-24 116.7 117 58.1
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.7e-24 116.3 95 62.1
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 2.3e-24 115.9 115 55.7
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 2.9e-24 115.5 115 55.7
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 2.9e-24 115.5 115 55.7
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 2.9e-24 115.5 115 55.7
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 3.8e-24 115.2 115 55.7
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.9e-23 112.8 115 54.8
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 2.5e-23 112.5 119 58.8
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 1.8e-21 106.3 107 55.1
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.7e-19 98.6 102 53.9
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 5.0e-16 88.2 101 47.5
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.6e-14 83.2 121 43.8
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.0e-14 80.9 119 42.0
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 1.4e-13 80.1 69 62.3
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.4e-13 80.1 121 42.1
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 8.9e-13 77.4 93 50.5
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 5.8e-12 74.7 48 72.9
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 5.8e-12 74.7 48 72.9
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 9.8e-12 73.9 44 77.3
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.3e-11 73.6 48 70.8
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.2e-10 68.9 104 43.3
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-09 67.0 119 42.9
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.8e-06 55.8 40 67.5


User provided reference genes

Program Settings