Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-59 232.3 115 100.0
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 1.0e-36 156.8 86 90.7
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.0e-36 156.8 86 90.7
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.0e-36 156.8 86 90.7
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 1.0e-36 156.8 86 90.7
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.0e-36 156.8 86 90.7
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 4.8e-26 121.3 89 73.0
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 1.5e-24 116.3 91 69.2
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 2.6e-24 115.5 94 67.0
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-24 115.2 117 60.7
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 4.5e-24 114.8 94 62.8
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.3e-23 113.2 91 67.0
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 1.3e-23 113.2 94 63.8
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 5.0e-23 111.3 91 63.7
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 9.3e-22 107.1 89 59.6
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.2e-21 106.7 90 65.6
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.6e-21 106.3 120 49.2
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 3.5e-21 105.1 91 65.9
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 3.0e-20 102.1 84 70.2
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.0e-20 102.1 83 63.9
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.0e-20 102.1 83 63.9
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.0e-20 102.1 83 63.9
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.0e-20 102.1 83 63.9
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.0e-20 102.1 83 63.9
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 3.0e-20 102.1 83 63.9
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 3.9e-20 101.7 86 58.1
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-20 100.5 84 71.4
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.5e-19 99.8 94 55.3
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 2.5e-19 99.0 71 69.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 3.3e-19 98.6 71 67.6
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 3.3e-19 98.6 71 67.6
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 3.3e-19 98.6 71 67.6
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 4.3e-19 98.2 71 67.6
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-18 96.7 84 70.2
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.6e-18 96.3 88 69.3
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 1.6e-18 96.3 81 64.2
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.7e-18 95.1 84 69.0
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.8e-18 94.7 95 58.9
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.8e-18 94.7 95 58.9
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 4.8e-18 94.7 82 61.0
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.8e-17 92.8 76 65.8
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.8e-17 92.8 84 59.5
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 3.4e-16 88.6 100 53.0
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 7.7e-16 87.4 103 49.5
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.0e-15 87.0 80 66.2
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 1.0e-15 87.0 73 58.9
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 2.9e-15 85.5 76 56.6
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 4.2e-14 81.6 81 58.0
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 5.5e-14 81.3 80 57.5
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 7.2e-14 80.9 81 58.0
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 7.2e-14 80.9 81 58.0
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 7.2e-14 80.9 81 58.0
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 7.2e-14 80.9 81 58.0
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 2.7e-13 79.0 68 64.7
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 1.0e-12 77.0 81 56.8
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 5.1e-12 74.7 65 67.7
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.7e-10 69.7 99 45.5
Manes.10G075803 Manihot esculenta HOM05D004473 ORTHO05D005652 3.7e-10 68.6 54 68.5
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 4.8e-10 68.2 43 74.4
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 4.8e-10 68.2 43 74.4
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 6.9e-09 64.3 74 50.0
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.4e-06 56.6 56 60.7
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.2e-06 55.1 49 65.3
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 5.5e-06 54.7 61 55.7


User provided reference genes

Program Settings