Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1638.6 832 100.0
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1486.9 843 90.0
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1474.5 832 88.8
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1433.3 832 88.5
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1383.6 828 84.7
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1332.8 836 82.9
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1327.0 813 82.2
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1323.1 824 83.3
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1311.6 817 81.3
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1311.2 819 81.1
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1310.8 819 81.2
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1310.4 818 81.4
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1307.7 818 81.5
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1305.8 819 81.6
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1305.8 837 79.5
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1305.4 818 80.3
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1305.0 818 80.4
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1302.7 815 80.9
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1302.3 819 81.0
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1302.3 819 81.0
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1302.3 834 79.6
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1301.6 819 81.0
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1299.6 814 80.7
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1298.9 816 80.0
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1298.9 818 80.9
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1297.3 819 80.3
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1296.6 815 80.5
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1295.4 818 81.4
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1295.0 818 81.5
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1293.9 829 79.3
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1293.9 815 81.8
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1293.5 831 80.0
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1293.5 800 81.6
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1293.1 817 81.3
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1293.1 816 79.5
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1292.7 817 80.8
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1290.8 818 80.0
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1289.2 817 80.3
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1288.1 818 80.0
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1287.7 815 80.6
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1287.7 819 80.1
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1286.9 823 81.5
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1286.2 819 80.5
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1285.4 821 79.2
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1284.6 817 80.5
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1284.2 821 80.5
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1283.9 818 79.7
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1283.5 819 81.3
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1281.9 821 78.8
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1281.9 815 79.1
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1281.2 815 80.7
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1280.8 819 79.5
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1280.0 819 79.5
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1280.0 811 81.1
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1279.6 860 76.9
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1279.6 818 80.7
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1278.1 817 80.2
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1278.1 820 79.6
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1275.8 819 79.5
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1275.4 825 79.4
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1275.4 815 78.9
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1270.4 816 79.2
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1270.4 838 79.5
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1270.0 832 78.7
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1270.0 868 76.6
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1268.8 825 79.0
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1267.3 816 79.8
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1267.3 818 78.7
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1266.9 813 79.0
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1266.5 866 71.5
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1266.5 821 80.1
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1265.8 813 78.1
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1265.4 816 78.1
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1264.2 830 78.3
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1263.4 816 77.8
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1263.4 816 78.4
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1263.1 816 78.6
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1263.1 827 77.9
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1262.7 817 78.1
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1262.3 836 77.6
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1262.3 816 78.2
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1261.1 820 79.3
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1259.6 835 77.7
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1259.2 812 78.9
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1258.4 811 78.4
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1256.9 842 77.7
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1254.6 834 78.8
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1253.8 812 78.2
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1250.3 817 78.1
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1249.2 807 79.4
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1246.9 855 74.5
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1245.7 815 79.1
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1237.6 807 77.6
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1236.1 819 77.7
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1235.7 818 77.4
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1234.6 828 75.5
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1234.2 827 76.7
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1233.8 820 77.6
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1232.6 766 82.4
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1231.1 816 78.6
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1229.9 820 78.5
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1225.7 822 76.4
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1224.2 818 77.5
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1224.2 818 77.5
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1224.2 818 77.5
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1223.4 845 70.8
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1221.5 822 76.5
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1219.9 817 78.0
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1218.4 823 77.6
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1218.4 823 77.6
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1218.4 823 77.6
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1218.4 823 77.6
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1216.8 805 76.9
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1216.8 845 74.6
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1216.4 814 76.3
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 0.0e+00 1213.4 859 71.5
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1211.8 871 72.6
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1208.4 818 75.3
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 0.0e+00 1206.0 785 77.3
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1205.3 818 75.4
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1204.5 781 79.6
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1203.3 781 79.6
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1188.7 817 75.5
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1186.0 855 73.3
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1184.5 754 80.0
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1183.7 819 74.5
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 0.0e+00 1181.0 818 74.9
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1169.5 814 73.3
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 0.0e+00 1169.5 807 73.4
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1164.1 883 69.2
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1161.0 694 83.4
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1156.0 815 75.3
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1155.6 827 72.1
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1149.8 832 72.6
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 0.0e+00 1141.7 814 70.5
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1129.4 758 75.9
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1125.2 817 70.5
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 0.0e+00 1116.3 737 79.4
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1111.3 826 69.5
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1110.9 818 69.9
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1095.1 773 70.6
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 3.3e-294 1015.0 810 68.0
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 5.9e-275 951.0 588 77.2
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 3.5e-267 925.2 624 70.5
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 4.2e-257 891.7 533 81.6
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 6.3e-253 877.9 816 60.8
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 5.3e-252 874.8 577 74.7
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 1.3e-245 853.6 538 81.4
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 9.0e-175 618.2 709 51.6
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 2.9e-157 560.1 278 97.8
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 2.4e-151 540.4 457 60.4
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 2.3e-138 497.3 354 79.7
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 3.2e-132 476.9 313 75.1
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 5.0e-117 426.4 320 76.9
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.4e-98 365.2 397 53.4
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.3e-84 317.4 582 44.8
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 5.7e-60 236.9 156 77.6
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 2.2e-51 208.4 134 74.6
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 3.7e-43 181.0 163 55.8
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 1.1e-39 169.5 500 29.8
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 5.9e-33 147.1 458 27.1
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 1.9e-31 142.1 459 28.1
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 3.3e-28 131.3 76 80.3
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 7.7e-25 120.2 441 26.1
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 1.7e-24 119.0 63 85.7
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 3.8e-24 117.9 470 27.2
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 6.5e-24 117.1 96 64.6
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.0e-21 108.2 130 46.9
TPR.G27891 Trifolium pratense HOM05D003945 ORTHO05D004625 6.3e-19 100.5 63 74.6
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-17 94.7 282 27.7
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 7.7e-17 93.6 220 32.3
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 6.8e-13 80.5 77 50.6
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 6.8e-13 80.5 145 37.2
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-07 63.2 70 45.7
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 4.3e-07 61.2 38 76.3
CBR_g38920 Chara braunii HOM05D003945 ORTHO05D004625 7.3e-07 60.5 106 34.0


User provided reference genes

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