Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 4.7e-111 404.4 191 100.0
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 4.7e-111 404.4 191 100.0
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 2.9e-108 395.2 191 97.9
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 5.4e-107 391.0 191 96.9
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 3.0e-105 385.2 191 96.3
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 95.3
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.1e-104 383.3 191 95.8
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 1.1e-104 383.3 191 95.3
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 1.9e-104 382.5 189 96.3
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 5.6e-104 380.9 191 95.3
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 7.3e-104 380.6 191 95.3
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 9.5e-104 380.2 191 95.3
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.2e-103 379.8 191 95.3
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.3
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.3
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 2.8e-103 378.6 191 94.8
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 8.0e-103 377.1 191 94.8
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 8.0e-103 377.1 191 94.8
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 1.8e-102 375.9 191 94.2
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.1e-102 375.2 191 94.2
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.8e-102 374.0 191 93.7
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 6.8e-102 374.0 191 94.2
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 6.8e-102 374.0 191 94.2
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 6.8e-102 374.0 191 94.2
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.4e-101 371.3 188 93.1
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.9e-100 368.6 188 92.0
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 3.2e-99 365.2 191 91.6
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.0e-98 362.5 184 94.0
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.0e-98 360.9 188 91.5
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 6.0e-98 360.9 191 90.6
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 2.3e-97 359.0 189 91.5
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 5.0e-97 357.8 170 100.0
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-96 355.9 179 93.9
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.3e-96 354.0 170 98.8
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.3e-96 354.0 170 98.8
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-94 350.1 170 98.2
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 8.9e-94 347.1 188 87.2
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 2.9e-92 342.0 166 97.6
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 4.9e-92 341.3 170 95.9
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 3.2e-91 338.6 170 95.3
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 5.4e-91 337.8 170 95.9
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.2e-90 336.7 186 86.6
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.2e-90 336.7 186 86.6
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 2.1e-90 335.9 168 95.8
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 4.6e-90 334.7 170 94.7
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.0e-89 333.6 165 95.8
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.3e-89 333.2 168 95.2
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 3.0e-89 332.0 170 94.7
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 8.6e-89 330.5 170 93.5
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 3.3e-88 328.6 167 94.6
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 2.8e-87 325.5 170 92.4
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-84 316.2 170 90.0
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 2.9e-84 315.5 185 82.7
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-84 315.1 177 87.0
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.9e-83 312.8 160 93.1
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-82 307.8 163 90.8
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-81 305.4 168 86.9
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.9e-81 305.1 166 89.2
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 5.1e-81 304.7 170 88.2
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 6.6e-81 304.3 153 94.8
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 5.6e-80 301.2 191 80.1
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 8.1e-79 297.4 180 80.6
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-78 296.6 179 81.6
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-78 296.2 165 86.7
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-78 293.9 177 80.8
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-78 293.9 164 86.0
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.4e-75 286.6 140 98.6
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-75 286.6 173 80.9
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.4e-75 284.6 141 97.2
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.4e-75 284.6 141 97.2
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-74 283.1 164 84.8
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 3.5e-74 282.0 170 81.8
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-74 282.0 188 72.3
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.1e-73 278.1 135 97.8
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 8.1e-71 270.8 170 81.8
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-70 269.6 138 94.9
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-68 262.7 135 93.3
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-66 256.1 138 90.6
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-66 256.1 138 90.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-65 252.7 132 91.7
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-65 252.3 155 80.6
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-64 248.8 142 84.5
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-63 246.9 138 87.0
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-62 242.7 131 88.5
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 4.5e-61 238.4 130 90.0
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.7e-60 236.5 191 66.5
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-60 236.1 136 86.0
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 5.5e-59 231.5 191 66.0
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 3.9e-57 225.3 136 82.4
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-56 223.8 138 83.3
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-55 219.9 127 85.0
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 6.9e-54 214.5 109 93.6
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 6.9e-54 214.5 112 91.1
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-53 213.0 135 80.0
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 3.4e-53 212.2 99 100.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 7.6e-53 211.1 114 90.4
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 4.9e-52 208.4 185 61.1
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.4e-52 207.6 138 76.1
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.4e-52 207.6 148 72.3
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.9e-51 206.5 100 97.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.2e-50 203.8 99 97.0
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 1.0e-49 200.7 97 96.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.3e-49 200.3 96 97.9
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-47 192.6 115 84.3
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 6.3e-47 191.4 109 86.2
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.1e-46 188.7 102 88.2
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-45 186.8 100 89.0
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 2.0e-45 186.4 145 60.7
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.7e-44 183.3 146 58.2
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.9e-43 179.9 99 86.9
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-43 178.7 96 87.5
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-42 174.9 94 88.3
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.8e-41 173.3 89 92.1
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.9e-41 172.2 143 63.6
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 5.1e-41 171.8 79 98.7
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.1e-40 170.6 102 81.4
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.4e-38 163.7 108 75.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-37 160.2 164 55.5
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-37 159.8 145 60.0
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-36 157.5 87 85.1
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-36 157.5 87 85.1
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.1e-35 154.1 74 97.3
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.1e-35 154.1 74 97.3
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 4.2e-35 152.1 72 95.8
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-35 152.1 172 50.6
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 95.9
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-33 146.7 81 85.2
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.9e-33 145.6 71 94.4
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 5.1e-33 145.2 175 44.6
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.6e-32 142.9 150 54.7
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.4e-32 141.4 72 91.7
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 9.7e-32 141.0 74 89.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-31 139.8 74 89.2
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-31 138.7 74 89.2
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-31 138.3 74 87.8
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-31 137.9 74 87.8
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-30 137.5 135 59.3
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-30 137.5 135 59.3
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.8e-30 136.7 74 86.5
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 1.8e-30 136.7 86 75.6
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 5.3e-30 135.2 68 89.7
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-30 135.2 72 88.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-29 134.0 70 90.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-29 134.0 74 86.5
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-29 132.1 72 86.1
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-28 129.8 74 85.1
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-28 128.6 74 85.1
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 5.0e-28 128.6 91 71.4
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-27 127.1 71 85.9
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-27 124.4 74 82.4
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 3.7e-23 112.5 57 91.2
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.2e-23 111.3 64 82.8
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.8e-22 110.2 69 78.3
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 7.0e-22 108.2 59 91.5
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 3.5e-21 105.9 61 88.5
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.1e-18 96.7 72 68.1
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 4.7e-18 95.5 51 88.2
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-17 92.4 69 68.1
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-17 91.3 111 49.5
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-16 90.5 58 77.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.1e-14 84.3 44 90.9
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-14 81.3 181 34.8
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.5e-13 79.3 45 80.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-11 73.6 50 72.0
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 4.0e-09 65.9 34 85.3
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.0e-08 63.5 35 82.9
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 4.4e-08 62.4 30 93.3
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-08 61.6 60 58.3
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-07 60.5 34 82.4


User provided reference genes

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