Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028611 Vanilla planifolia HOM05D000961 ORTHO05D000841 1.4e-48 196.1 105 100.0
HPP92_028663 Vanilla planifolia HOM05D000961 ORTHO05D000841 5.4e-16 87.8 167 41.3
ATR0332G113 Amborella trichopoda HOM05D000961 ORTHO05D000841 9.2e-08 60.5 46 67.4
HanXRQChr03g0091141 Helianthus annuus HOM05D000961 ORTHO05D000841 3.5e-07 58.5 41 68.3
Lj6C54G3 Lonicera japonica HOM05D000961 ORTHO05D000841 4.5e-07 58.2 41 68.3
ATR0743G173 Amborella trichopoda HOM05D000961 ORTHO05D000841 7.7e-07 57.4 47 55.3
Dinv44194 Davidia involucrata HOM05D000961 ORTHO05D000841 1.0e-06 57.0 42 64.3
Rhsim09G0028200 Rhododendron simsii HOM05D000961 ORTHO05D000841 1.0e-06 57.0 41 63.4
Sabra16G0057800 Salix brachista HOM05D000961 ORTHO05D000841 1.0e-06 57.0 50 56.0
Zm00001eb334900 Zea mays HOM05D000961 ORTHO05D000841 1.0e-06 57.0 46 63.0
Ca_01261_v3 Cicer arietinum L. HOM05D000961 ORTHO05D000841 1.3e-06 56.6 42 59.5
Dinv22728 Davidia involucrata HOM05D000961 ORTHO05D000841 1.3e-06 56.6 46 58.7
PSO339G0759 Papaver somniferum HOM05D000961 ORTHO05D000841 1.3e-06 56.6 46 58.7
PSO384G1411 Papaver somniferum HOM05D000961 ORTHO05D000841 1.3e-06 56.6 46 58.7
Thecc.04G180300 Theobroma cacao HOM05D000961 ORTHO05D000841 1.3e-06 56.6 42 64.3
Aqoxy2G00162 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 1.7e-06 56.2 46 60.9
Nn7g36249 Nelumbo nucifera HOM05D000961 ORTHO05D000841 1.7e-06 56.2 46 58.7
Os02g0780500 Oryza sativa ssp. japonica HOM05D000961 ORTHO05D000841 1.7e-06 56.2 46 60.9
TAR623G1550 Trochodendron aralioides HOM05D000961 ORTHO05D000841 1.7e-06 56.2 46 60.9
Dinv18057 Davidia involucrata HOM05D000961 ORTHO05D000841 2.3e-06 55.8 46 56.5
Hund19153 Selenicereus undatus HOM05D000961 ORTHO05D000841 2.3e-06 55.8 46 58.7
ECA240G4184 Erigeron canadensis HOM05D000961 ORTHO05D000841 2.9e-06 55.5 41 63.4
MBI11_g13787_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 2.9e-06 55.5 46 54.3
TPR.G18849 Trifolium pratense HOM05D000961 ORTHO05D000841 2.9e-06 55.5 42 59.5
CDE09G1085 Ceratophyllum demersum HOM05D000961 ORTHO05D000841 3.8e-06 55.1 41 63.4
RcHm_v2.0_Chr4g0406851 Rosa chinensis HOM05D000961 ORTHO05D000841 3.8e-06 55.1 42 64.3
GSVIVG01010751001 Vitis vinifera HOM05D000961 ORTHO05D000841 3.8e-06 55.1 42 61.9
Aqoxy2G04098 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 5.0e-06 54.7 49 55.1
CARHR136910 Cardamine hirsuta HOM05D000961 ORTHO05D000841 5.0e-06 54.7 46 56.5
FvH4_4g10730 Fragaria vesca HOM05D000961 ORTHO05D000841 5.0e-06 54.7 42 64.3
FAN12G1338 Fragaria x ananassa HOM05D000961 ORTHO05D000841 5.0e-06 54.7 42 64.3
Gohir.A10G136800 Gossypium hirsutum HOM05D000961 ORTHO05D000841 5.0e-06 54.7 42 61.9
Nn2g15283 Nelumbo nucifera HOM05D000961 ORTHO05D000841 5.0e-06 54.7 44 59.1
Hund24712 Selenicereus undatus HOM05D000961 ORTHO05D000841 5.0e-06 54.7 46 56.5
Zm00001eb125850 Zea mays HOM05D000961 ORTHO05D000841 5.0e-06 54.7 46 60.9
Eucgr.A02368 Eucalyptus grandis HOM05D000961 ORTHO05D000841 6.6e-06 54.3 46 56.5
FAN12G0126 Fragaria x ananassa HOM05D000961 ORTHO05D000841 6.6e-06 54.3 47 61.7
Lsat_1_v5_gn_3_115281 Lactuca sativa HOM05D000961 ORTHO05D000841 6.6e-06 54.3 41 58.5
Medtr2g098850 Medicago truncatula HOM05D000961 ORTHO05D000841 6.6e-06 54.3 42 59.5
Zm00001eb227030 Zea mays HOM05D000961 ORTHO05D000841 6.6e-06 54.3 46 60.9
Zm00001eb272820 Zea mays HOM05D000961 ORTHO05D000841 6.6e-06 54.3 46 60.9
Aa31LG1G23840 Aethionema arabicum HOM05D000961 ORTHO05D000841 8.6e-06 53.9 46 56.5
AL4G40150 Arabidopsis lyrata HOM05D000961 ORTHO05D000841 8.6e-06 53.9 46 56.5
AT2G41830 Arabidopsis thaliana HOM05D000961 ORTHO05D000841 8.6e-06 53.9 46 56.5
A05p02570 Brassica napus HOM05D000961 ORTHO05D000841 8.6e-06 53.9 46 56.5
Carub.0004s2410 Capsella rubella HOM05D000961 ORTHO05D000841 8.6e-06 53.9 46 56.5
Migut.K00084 Erythranthe guttata HOM05D000961 ORTHO05D000841 8.6e-06 53.9 54 50.0
MBI08_g23497_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 8.6e-06 53.9 46 54.3
Psat1g007080 Pisum sativum HOM05D000961 ORTHO05D000841 8.6e-06 53.9 42 57.1
Potri.016G055100 Populus trichocarpa HOM05D000961 ORTHO05D000841 8.6e-06 53.9 41 61.0


User provided reference genes

Program Settings