Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028598 Vanilla planifolia HOM05D003068 ORTHO05D003444 1.2e-138 496.5 257 100.0
TAR371G1274 Trochodendron aralioides HOM05D003068 ORTHO05D003444 2.2e-23 113.6 222 40.1
MBI07_g02007_MAGBIO Magnolia biondii HOM05D003068 ORTHO05D003444 1.4e-22 110.9 254 35.0
TAR629G1943 Trochodendron aralioides HOM05D003068 ORTHO05D003444 5.5e-22 109.0 220 36.4
Aqoxy5G03256 Aquilegia oxysepala HOM05D003068 ORTHO05D003444 9.7e-19 98.2 223 38.1
Nn4g22239 Nelumbo nucifera HOM05D003068 ORTHO05D003444 6.3e-18 95.5 258 31.0
Dinv11705 Davidia involucrata HOM05D003068 ORTHO05D003444 1.1e-17 94.7 217 35.5
Hund25484 Selenicereus undatus HOM05D003068 ORTHO05D003444 4.1e-17 92.8 223 34.5
Nitab4.5_0000039g0080 Nicotiana tabacum HOM05D003068 ORTHO05D003444 2.2e-15 87.0 215 35.3
Nitab4.5_0002480g0020 Nicotiana tabacum HOM05D003068 ORTHO05D003444 2.9e-15 86.7 215 35.3
CSS0019564 Camellia sinensis var. sinensis HOM05D003068 ORTHO05D003444 1.4e-14 84.3 236 30.9
Sc14g0009170 Simmondsia chinensis HOM05D003068 ORTHO05D003444 3.2e-14 83.2 213 32.9
Cc11_g17310 Coffea canephora HOM05D003068 ORTHO05D003444 7.2e-14 82.0 211 34.1
TAR374G0446 Trochodendron aralioides HOM05D003068 ORTHO05D003444 9.4e-14 81.6 253 30.8
PSO478G2322 Papaver somniferum HOM05D003068 ORTHO05D003444 1.2e-13 81.3 256 32.8
CiPaw.05G106000 Carya illinoinensis HOM05D003068 ORTHO05D003444 6.1e-13 79.0 220 33.2
PSO017G0558 Papaver somniferum HOM05D003068 ORTHO05D003444 7.9e-13 78.6 236 31.8
Actinidia30621 Actinidia chinensis HOM05D003068 ORTHO05D003444 2.3e-12 77.0 219 33.8
Ah.02g131010 Amaranthus hybridus HOM05D003068 ORTHO05D003444 5.2e-12 75.9 215 33.0
vmacro01043 Vaccinium macrocarpon HOM05D003068 ORTHO05D003444 6.7e-12 75.5 239 31.4
RcHm_v2.0_Chr4g0429641 Rosa chinensis HOM05D003068 ORTHO05D003444 8.8e-12 75.1 219 32.0
Sc11g0000320 Simmondsia chinensis HOM05D003068 ORTHO05D003444 1.5e-11 74.3 216 33.8
EL10Ac6g13546 Beta vulgaris HOM05D003068 ORTHO05D003444 2.0e-11 73.9 218 36.2
FvH4_4g23270 Fragaria vesca HOM05D003068 ORTHO05D003444 2.0e-11 73.9 218 32.6
FAN12G3359 Fragaria x ananassa HOM05D003068 ORTHO05D003444 2.0e-11 73.9 220 33.2
PGR102G3269 Punica granatum HOM05D003068 ORTHO05D003444 2.6e-11 73.6 224 30.8
Hund06111 Selenicereus undatus HOM05D003068 ORTHO05D003444 2.6e-11 73.6 215 34.4
GSVIVG01033051001 Vitis vinifera HOM05D003068 ORTHO05D003444 2.6e-11 73.6 263 29.7
FAN17G2511 Fragaria x ananassa HOM05D003068 ORTHO05D003444 3.3e-11 73.2 218 31.7
TAR454G0002 Trochodendron aralioides HOM05D000127 ORTHO05D003444 3.3e-11 73.2 150 38.0
FAN07G2860 Fragaria x ananassa HOM05D003068 ORTHO05D003444 5.7e-11 72.4 218 32.6
Thecc.02G200100 Theobroma cacao HOM05D003068 ORTHO05D003444 1.7e-10 70.9 207 36.2
Actinidia39791 Actinidia chinensis HOM05D003068 ORTHO05D003444 2.2e-10 70.5 261 29.5
CANSAT01G1374 Cannabis sativa HOM05D003068 ORTHO05D003444 2.2e-10 70.5 218 33.5
CiPaw.06G106100 Carya illinoinensis HOM05D003068 ORTHO05D003444 2.2e-10 70.5 258 30.2
MD13G1123200 Malus domestica HOM05D003068 ORTHO05D003444 2.2e-10 70.5 216 31.0
CANSAT01G2060 Cannabis sativa HOM05D003068 ORTHO05D003444 3.7e-10 69.7 246 31.7
Manes.13G007800 Manihot esculenta HOM05D003068 ORTHO05D003444 8.2e-10 68.6 217 30.4
Oeu044470.1 Olea europaea HOM05D003068 ORTHO05D003444 8.2e-10 68.6 230 32.6
CAN.G31.3 Capsicum annuum HOM05D003068 ORTHO05D003444 1.1e-09 68.2 220 31.4
Prupe.1G221600 Prunus persica HOM05D003068 ORTHO05D003444 1.1e-09 68.2 262 27.1
Rhsim12G0023100 Rhododendron simsii HOM05D003068 ORTHO05D003444 1.4e-09 67.8 237 29.5
Nn3g16377 Nelumbo nucifera HOM05D003068 ORTHO05D003444 2.4e-09 67.0 220 27.7
Oeu011351.2 Olea europaea HOM05D003068 ORTHO05D003444 2.4e-09 67.0 229 28.8
AUR62028892 Chenopodium quinoa HOM05D003068 ORTHO05D003444 3.1e-09 66.6 211 31.8
Duzib147G0957 Durio zibethinus HOM05D003068 ORTHO05D003444 3.1e-09 66.6 229 31.9
ECA233G3893 Erigeron canadensis HOM05D003068 ORTHO05D003444 3.1e-09 66.6 177 37.3
HanXRQChr08g0210011 Helianthus annuus HOM05D003068 ORTHO05D003444 3.1e-09 66.6 259 31.7
QL03p051306 Quercus lobata HOM05D003068 ORTHO05D003444 4.1e-09 66.2 263 28.9
Cfa009397 Carpinus fangiana HOM05D003068 ORTHO05D003444 9.1e-09 65.1 218 33.5
Potri.017G069220 Populus trichocarpa HOM05D003068 ORTHO05D003444 1.2e-08 64.7 243 28.4
Thecc.04G040800 Theobroma cacao HOM05D003068 ORTHO05D003444 1.6e-08 64.3 215 33.5
AUR62005661 Chenopodium quinoa HOM05D003068 ORTHO05D003444 2.6e-08 63.5 254 29.9
Rhsim12G0023200 Rhododendron simsii HOM05D003068 ORTHO05D003444 2.6e-08 63.5 237 30.0
Lj3C1074T4 Lonicera japonica HOM05D003068 ORTHO05D003444 4.5e-08 62.8 278 30.9
arahy.Tifrunner.gnm1.ann1.V6C9BH Arachis hypogaea HOM05D003068 ORTHO05D003444 1.0e-07 61.6 267 28.1
Duzib251G0076 Durio zibethinus HOM05D003068 ORTHO05D003444 1.0e-07 61.6 212 29.2
Manes.12G007400 Manihot esculenta HOM05D003068 ORTHO05D003444 1.0e-07 61.6 267 29.2
Gorai.006G044200 Gossypium raimondii HOM05D003068 ORTHO05D003444 1.3e-07 61.2 230 29.6
vmacro16090 Vaccinium macrocarpon HOM05D003068 ORTHO05D003444 1.7e-07 60.8 217 29.0
arahy.Tifrunner.gnm1.ann1.51F4P8 Arachis hypogaea HOM05D003068 ORTHO05D003444 2.2e-07 60.5 270 28.1
CSS0012326 Camellia sinensis var. sinensis HOM05D003068 ORTHO05D003444 2.2e-07 60.5 261 28.0
Gohir.A09G037700 Gossypium hirsutum HOM05D003068 ORTHO05D003444 2.9e-07 60.1 244 29.9
GSVIVG01000921001 Vitis vinifera HOM05D003068 ORTHO05D003444 2.9e-07 60.1 231 29.0
Actinidia08047 Actinidia chinensis HOM05D003068 ORTHO05D003444 5.0e-07 59.3 240 27.1
Glyma.19G095700 Glycine max HOM05D003068 ORTHO05D003444 5.0e-07 59.3 256 27.0
Eucgr.B03531 Eucalyptus grandis HOM05D003068 ORTHO05D003444 8.5e-07 58.5 217 31.3
Gohir.D09G038700 Gossypium hirsutum HOM05D003068 ORTHO05D003444 8.5e-07 58.5 230 29.6
MD16G1124000 Malus domestica HOM05D003068 ORTHO05D003444 1.1e-06 58.2 221 29.9
Ca_26730_v3 Cicer arietinum L. HOM05D003068 ORTHO05D003444 2.5e-06 57.0 247 27.1
Haze_12457 Corylus avellana HOM05D003068 ORTHO05D003444 2.5e-06 57.0 203 32.0
Duzib248G1470 Durio zibethinus HOM05D003068 ORTHO05D003444 2.5e-06 57.0 240 27.9
Atru.chr11.2377 Acer truncatum HOM05D003068 ORTHO05D003444 3.2e-06 56.6 218 30.7
Actinidia09620 Actinidia chinensis HOM05D003068 ORTHO05D003444 9.4e-06 55.1 235 26.8
MD17G1002800 Malus domestica HOM05D003068 ORTHO05D003444 9.4e-06 55.1 263 28.5


User provided reference genes

Program Settings