Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028499 Vanilla planifolia HOM05D005351 ORTHO05D006542 7.3e-30 133.3 69 100.0
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 2.8e-21 104.8 92 69.6
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 2.6e-11 71.6 90 55.6
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 3.4e-11 71.2 60 70.0
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.7e-10 68.9 86 55.8
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 1.7e-10 68.9 58 70.7
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 6.4e-10 67.0 90 51.1
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 6.4e-10 67.0 84 56.0
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 8.4e-10 66.6 86 55.8
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 1.1e-09 66.2 91 53.8
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 1.1e-09 66.2 88 52.3
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.9e-09 65.5 84 54.8
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 1.9e-09 65.5 84 54.8
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 1.9e-09 65.5 63 61.9
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 1.9e-09 65.5 88 52.3
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 2.4e-09 65.1 93 51.6
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 2.4e-09 65.1 93 51.6
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 2.4e-09 65.1 86 54.7
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 3.2e-09 64.7 84 54.8
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 3.2e-09 64.7 86 52.3
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 4.2e-09 64.3 87 46.0
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 4.2e-09 64.3 83 53.0
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 5.4e-09 63.9 86 52.3
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 7.1e-09 63.5 83 53.0
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 1.2e-08 62.8 83 51.8
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 1.2e-08 62.8 84 52.4
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 1.2e-08 62.8 84 52.4
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 1.2e-08 62.8 97 50.5
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 2.1e-08 62.0 84 51.2
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 2.1e-08 62.0 83 53.0
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 2.1e-08 62.0 84 50.0
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 3.5e-08 61.2 86 51.2
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 6.0e-08 60.5 91 49.5
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 6.0e-08 60.5 84 52.4
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 6.0e-08 60.5 84 51.2
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 6.0e-08 60.5 90 48.9
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 1.0e-07 59.7 87 50.6
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 1.8e-07 58.9 91 49.5
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 2.3e-07 58.5 91 47.3
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 3.0e-07 58.2 81 49.4
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 5.1e-07 57.4 92 48.9
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 5.1e-07 57.4 79 48.1
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 6.7e-07 57.0 84 47.6
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 8.7e-07 56.6 86 43.0
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 8.7e-07 56.6 93 45.2
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 8.7e-07 56.6 77 50.6
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 1.1e-06 56.2 106 38.7
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 1.5e-06 55.8 93 44.1
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.5e-06 55.8 84 48.8
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 1.5e-06 55.8 91 45.1
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.9e-06 55.5 91 45.1
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 1.9e-06 55.5 125 38.4
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 1.9e-06 55.5 100 45.0
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 2.5e-06 55.1 90 43.3
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 2.5e-06 55.1 85 45.9
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 3.3e-06 54.7 84 47.6
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 4.3e-06 54.3 84 46.4
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 4.3e-06 54.3 86 48.8
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.3e-06 54.3 86 48.8
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 4.3e-06 54.3 70 54.3
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 4.3e-06 54.3 84 47.6
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 5.6e-06 53.9 86 48.8
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 5.6e-06 53.9 86 48.8
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 5.6e-06 53.9 86 48.8
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 5.6e-06 53.9 86 47.7
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 7.4e-06 53.5 92 43.5
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 7.4e-06 53.5 83 47.0
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 9.6e-06 53.1 93 43.0


User provided reference genes

Program Settings