Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 8.3e-76 287.0 145 100.0
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.6e-26 121.7 61 93.4
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.0e-26 121.3 57 100.0
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 5.8e-21 104.8 61 75.4
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 5.8e-21 104.8 61 73.8
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 1.7e-20 103.2 61 72.1
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 2.2e-20 102.8 63 69.8
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 2.9e-20 102.4 71 69.0
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 6.5e-20 101.3 61 72.1
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 8.4e-20 100.9 63 68.3
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 1.1e-19 100.5 61 70.5
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 1.9e-19 99.8 62 69.4
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 1.9e-19 99.8 62 69.4
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 2.5e-19 99.4 61 70.5
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 2.5e-19 99.4 74 60.8
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 3.2e-19 99.0 61 70.5
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 4.2e-19 98.6 61 70.5
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 4.2e-19 98.6 61 70.5
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 7.1e-19 97.8 61 67.2
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 7.1e-19 97.8 61 70.5
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 7.1e-19 97.8 61 68.9
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 9.3e-19 97.4 61 67.2
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 9.3e-19 97.4 61 70.5
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 9.3e-19 97.4 61 67.2
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 9.3e-19 97.4 61 67.2
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 9.3e-19 97.4 61 70.5
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 9.3e-19 97.4 61 70.5
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 1.2e-18 97.1 70 61.4
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 1.2e-18 97.1 61 67.2
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 1.2e-18 97.1 61 68.9
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 1.2e-18 97.1 65 64.6
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 1.2e-18 97.1 61 68.9
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 1.6e-18 96.7 61 68.9
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 1.6e-18 96.7 61 68.9
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 2.1e-18 96.3 61 68.9
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 2.1e-18 96.3 61 70.5
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 2.1e-18 96.3 61 68.9
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 2.1e-18 96.3 63 68.3
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 2.7e-18 95.9 61 68.9
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 2.7e-18 95.9 63 65.1
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 3.5e-18 95.5 61 68.9
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 3.5e-18 95.5 61 68.9
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 3.5e-18 95.5 61 68.9
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 4.6e-18 95.1 61 65.6
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 4.6e-18 95.1 61 67.2
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 4.6e-18 95.1 61 67.2
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 4.6e-18 95.1 61 67.2
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 4.6e-18 95.1 61 67.2
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 6.0e-18 94.7 61 67.2
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 6.0e-18 94.7 61 70.5
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 6.0e-18 94.7 61 68.9
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 7.9e-18 94.4 65 61.5
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 7.9e-18 94.4 61 67.2
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 7.9e-18 94.4 61 68.9
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 1.0e-17 94.0 61 67.2
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 1.3e-17 93.6 61 68.9
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 1.3e-17 93.6 61 67.2
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.8e-17 93.2 61 67.2
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 1.8e-17 93.2 61 67.2
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 1.8e-17 93.2 61 67.2
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 1.8e-17 93.2 61 65.6
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.3e-17 92.8 60 66.7
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.3e-17 92.8 60 66.7
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.3e-17 92.8 60 66.7
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.3e-17 92.8 60 66.7
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 2.3e-17 92.8 60 66.7
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 3.9e-17 92.0 61 65.6
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 3.9e-17 92.0 61 65.6
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 3.9e-17 92.0 61 65.6
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 3.9e-17 92.0 61 65.6
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 3.9e-17 92.0 61 67.2
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 3.9e-17 92.0 71 57.7
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 5.1e-17 91.7 60 65.0
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 5.1e-17 91.7 74 58.1
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 6.7e-17 91.3 60 65.0
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.1e-16 90.5 57 68.4
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 1.1e-16 90.5 61 65.6
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 1.5e-16 90.1 61 65.6
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 1.5e-16 90.1 61 63.9
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 1.5e-16 90.1 61 65.6
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 1.9e-16 89.7 61 63.9
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 1.9e-16 89.7 61 65.6
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 2.5e-16 89.4 61 67.2
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 2.5e-16 89.4 61 67.2
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 3.3e-16 89.0 75 56.0
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 3.3e-16 89.0 61 63.9
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 3.3e-16 89.0 63 61.9
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 4.3e-16 88.6 61 62.3
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 7.4e-16 87.8 61 65.6
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 9.7e-16 87.4 61 62.3
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 2.8e-15 85.9 77 54.5
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 2.8e-15 85.9 67 58.2
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 4.8e-15 85.1 61 59.0
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 1.8e-14 83.2 61 62.3
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 1.8e-14 83.2 61 60.7
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 3.1e-14 82.4 61 60.7
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 3.1e-14 82.4 61 65.6
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 4.1e-14 82.0 60 61.7
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 4.1e-14 82.0 60 61.7
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 4.1e-14 82.0 60 61.7
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 9.0e-14 80.9 61 60.7
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 1.2e-13 80.5 61 60.7
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 2.0e-13 79.7 65 55.4
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 4.5e-13 78.6 94 43.6
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 5.0e-12 75.1 69 49.3
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 8.5e-12 74.3 70 54.3
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 2.1e-10 69.7 59 61.0
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 2.7e-10 69.3 74 59.5
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 1.0e-09 67.4 61 49.2
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.1e-09 65.1 37 89.2
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 6.7e-09 64.7 54 51.9
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.8e-09 64.3 35 91.4
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 1.1e-08 63.9 61 50.8
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 4.3e-08 62.0 65 41.5
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.4e-08 61.2 104 41.3
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-07 60.5 89 41.6
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 2.2e-07 59.7 60 43.3
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.2e-07 59.7 35 85.7
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 2.8e-07 59.3 60 43.3
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 2.8e-07 59.3 60 43.3
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.3e-07 58.2 34 85.3
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 5.3e-06 55.1 61 42.6


User provided reference genes

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