Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 6.4e-75 283.9 132 100.0
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 6.2e-70 267.3 128 97.7
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.8e-38 161.4 75 98.7
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 3.1e-13 79.0 83 43.4
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.2e-12 77.0 62 58.1
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 2.0e-12 76.3 55 58.2
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 2.0e-12 76.3 54 61.1
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.6e-12 75.9 43 72.1
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 3.5e-12 75.5 55 58.2
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 3.5e-12 75.5 55 61.8
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 5.9e-12 74.7 45 71.1
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.0e-11 73.9 51 60.8
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.0e-11 73.9 47 63.8
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.3e-11 73.6 61 52.5
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 1.3e-11 73.6 71 47.9
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 2.2e-11 72.8 46 67.4
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 2.2e-11 72.8 64 51.6
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.2e-11 72.8 47 63.8
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 2.2e-11 72.8 35 80.0
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.9e-11 72.4 64 56.2
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 2.9e-11 72.4 49 63.3
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 2.9e-11 72.4 49 63.3
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 3.8e-11 72.0 69 50.7
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.8e-11 72.0 57 56.1
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 3.8e-11 72.0 48 62.5
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 5.0e-11 71.6 49 61.2
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 5.0e-11 71.6 65 49.2
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 8.5e-11 70.9 38 76.3
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 8.5e-11 70.9 35 80.0
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.1e-10 70.5 43 65.1
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.1e-10 70.5 50 62.0
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 1.1e-10 70.5 43 62.8
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.1e-10 70.5 52 55.8
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.5e-10 70.1 46 63.0
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.5e-10 70.1 53 62.3
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.5e-10 70.1 53 62.3
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.5e-10 70.1 53 62.3
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.5e-10 70.1 53 62.3
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 1.9e-10 69.7 38 73.7
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.9e-10 69.7 52 59.6
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 2.5e-10 69.3 62 48.4
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 2.5e-10 69.3 48 64.6
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 2.5e-10 69.3 54 53.7
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 2.5e-10 69.3 54 55.6
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 3.2e-10 68.9 38 76.3
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 3.2e-10 68.9 51 56.9
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 3.2e-10 68.9 37 75.7
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 4.2e-10 68.6 37 78.4
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 4.2e-10 68.6 56 53.6
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 4.2e-10 68.6 76 42.1
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 5.5e-10 68.2 65 52.3
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 7.2e-10 67.8 35 74.3
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 7.2e-10 67.8 114 36.8
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 9.4e-10 67.4 51 58.8
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 9.4e-10 67.4 53 54.7
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 9.4e-10 67.4 35 74.3
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.2e-09 67.0 49 59.2
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.2e-09 67.0 41 65.9
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.6e-09 66.6 34 76.5
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.6e-09 66.6 61 59.0
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.6e-09 66.6 61 59.0
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 2.7e-09 65.9 39 64.1
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 3.6e-09 65.5 58 53.4
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 3.6e-09 65.5 47 57.4
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 3.6e-09 65.5 47 57.4
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 3.6e-09 65.5 47 57.4
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 6.1e-09 64.7 44 61.4
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 6.1e-09 64.7 70 44.3
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 8.0e-09 64.3 41 65.9
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.0e-08 63.9 31 77.4
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 1.0e-08 63.9 42 61.9
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.0e-08 63.9 62 51.6
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.0e-08 63.9 30 80.0
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.0e-08 63.9 46 58.7
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 1.0e-08 63.9 30 80.0
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.4e-08 63.5 30 76.7
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 1.4e-08 63.5 30 76.7
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 1.8e-08 63.2 41 61.0
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 1.8e-08 63.2 59 50.8
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.3e-08 62.8 74 47.3
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 2.3e-08 62.8 68 44.1
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 2.3e-08 62.8 30 80.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 3.0e-08 62.4 32 78.1
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 3.0e-08 62.4 41 56.1
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 4.0e-08 62.0 56 51.8
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 5.2e-08 61.6 30 76.7
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 5.2e-08 61.6 30 76.7
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 5.2e-08 61.6 30 76.7
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 5.2e-08 61.6 30 76.7
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 5.2e-08 61.6 30 76.7
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 6.7e-08 61.2 30 73.3
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 6.7e-08 61.2 121 37.2
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 8.8e-08 60.8 63 49.2
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 8.8e-08 60.8 30 76.7
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.2e-07 60.5 30 76.7
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.5e-07 60.1 58 51.7
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.0e-07 59.7 52 51.9
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 3.3e-07 58.9 30 73.3
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 4.4e-07 58.5 97 33.0
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 5.7e-07 58.2 33 66.7
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.3e-06 57.0 39 59.0
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 2.8e-06 55.8 99 34.3
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 4.8e-06 55.1 42 57.1
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 6.3e-06 54.7 85 38.8
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 8.2e-06 54.3 75 44.0


User provided reference genes

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