Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028332 Vanilla planifolia HOM05D003437 ORTHO05D004070 1.1e-60 236.5 120 100.0
HPP92_003451 Vanilla planifolia HOM05D003437 ORTHO05D004070 6.1e-32 141.0 99 70.7
HPP92_021036 Vanilla planifolia HOM05D003437 ORTHO05D004070 6.1e-32 141.0 113 65.5
HPP92_027429 Vanilla planifolia HOM05D003437 ORTHO05D004070 6.1e-32 141.0 113 65.5
CSS0020750 Camellia sinensis var. sinensis HOM05D003437 ORTHO05D004070 2.6e-27 125.6 99 63.6
CDE11G0502 Ceratophyllum demersum HOM05D003437 ORTHO05D004070 3.5e-27 125.2 113 54.0
Aa31LG9G12190 Aethionema arabicum HOM05D003437 ORTHO05D004070 4.5e-27 124.8 99 62.6
CiPaw.11G079100 Carya illinoinensis HOM05D003437 ORTHO05D004070 1.3e-26 123.2 97 60.8
Dinv21637 Davidia involucrata HOM05D003437 ORTHO05D004070 1.3e-26 123.2 99 61.6
PGR031G3334 Punica granatum HOM05D003437 ORTHO05D004070 1.3e-26 123.2 87 66.7
CDE02G3542 Ceratophyllum demersum HOM05D003437 ORTHO05D004070 1.7e-26 122.9 113 54.0
Ca_21965_v3 Cicer arietinum L. HOM05D003437 ORTHO05D004070 1.7e-26 122.9 87 69.0
Haze_07915 Corylus avellana HOM05D003437 ORTHO05D004070 3.8e-26 121.7 99 61.6
Eucgr.D02078 Eucalyptus grandis HOM05D003437 ORTHO05D004070 3.8e-26 121.7 113 54.9
TAR636G0838 Trochodendron aralioides HOM05D003437 ORTHO05D004070 5.0e-26 121.3 99 60.6
MSTRG.25525 Avicennia marina HOM05D003437 ORTHO05D004070 6.5e-26 120.9 113 56.6
Psat4g072160 Pisum sativum HOM05D003437 ORTHO05D004070 6.5e-26 120.9 86 67.4
Lalb_Chr05g0221271 Lupinus albus HOM05D003437 ORTHO05D004070 8.5e-26 120.6 99 60.6
TAR629G2039 Trochodendron aralioides HOM05D003437 ORTHO05D004070 8.5e-26 120.6 99 61.6
Cc08_g12440 Coffea canephora HOM05D003437 ORTHO05D004070 1.1e-25 120.2 98 58.2
Lj8A262T38 Lonicera japonica HOM05D003437 ORTHO05D004070 1.1e-25 120.2 113 56.6
TWI60G0877 Tripterygium wilfordii HOM05D003437 ORTHO05D004070 1.1e-25 120.2 97 60.8
Zm00001eb023520 Zea mays HOM05D003437 ORTHO05D004070 1.1e-25 120.2 99 59.6
Glyma.05G059300 Glycine max HOM05D003437 ORTHO05D004070 1.9e-25 119.4 99 60.6
Nn6g33961 Nelumbo nucifera HOM05D003437 ORTHO05D004070 1.9e-25 119.4 97 59.8
CSS0029742 Camellia sinensis var. sinensis HOM05D003437 ORTHO05D004070 3.2e-25 118.6 99 61.6
CSS0034933 Camellia sinensis var. sinensis HOM05D003437 ORTHO05D004070 3.2e-25 118.6 99 61.6
TPR.G7346 Trifolium pratense HOM05D003437 ORTHO05D004070 3.2e-25 118.6 86 66.3
CiPaw.12G052900 Carya illinoinensis HOM05D003437 ORTHO05D004070 4.2e-25 118.2 99 58.6
Migut.A00946 Erythranthe guttata HOM05D003437 ORTHO05D004070 4.2e-25 118.2 99 60.6
VMungo0251G1996 Vigna mungo HOM05D003437 ORTHO05D004070 4.2e-25 118.2 99 60.6
Glyma.17G141600 Glycine max HOM05D003437 ORTHO05D004070 5.5e-25 117.9 99 59.6
Phvul.003G220400 Phaseolus vulgaris HOM05D003437 ORTHO05D004070 7.2e-25 117.5 99 60.6
TWI81G0303 Tripterygium wilfordii HOM05D003437 ORTHO05D004070 7.2e-25 117.5 97 58.8
MSTRG.12097 Avicennia marina HOM05D003437 ORTHO05D004070 9.4e-25 117.1 87 65.5
Cfa012717 Carpinus fangiana HOM05D003437 ORTHO05D004070 9.4e-25 117.1 99 58.6
QL12p012159 Quercus lobata HOM05D003437 ORTHO05D004070 9.4e-25 117.1 99 59.6
Oeu006979.1 Olea europaea HOM05D003437 ORTHO05D004070 1.2e-24 116.7 87 63.2
Lalb_Chr16g0379581 Lupinus albus HOM05D003437 ORTHO05D004070 1.6e-24 116.3 99 58.6
Medtr4g100950 Medicago truncatula HOM05D003437 ORTHO05D004070 1.6e-24 116.3 86 64.0
PSO017G2532 Papaver somniferum HOM05D003437 ORTHO05D004070 2.1e-24 115.9 99 58.6
PSO170G5518 Papaver somniferum HOM05D003437 ORTHO05D004070 2.1e-24 115.9 99 58.6
Phvul.002G063000 Phaseolus vulgaris HOM05D003437 ORTHO05D004070 2.7e-24 115.5 96 60.4
Hma1.2p1_1172F.1_g263610 Hydrangea macrophylla HOM05D003437 ORTHO05D004070 4.7e-24 114.8 99 57.6
Zm00001eb391530 Zea mays HOM05D003437 ORTHO05D004070 4.7e-24 114.8 99 58.6
BcaB02g09398 Brassica carinata HOM05D003437 ORTHO05D004070 6.1e-24 114.4 87 62.1
A05p10000 Brassica napus HOM05D003437 ORTHO05D004070 6.1e-24 114.4 87 62.1
BraA05t19939Z Brassica rapa HOM05D003437 ORTHO05D004070 6.1e-24 114.4 87 62.1
CAN.G1367.8 Capsicum annuum HOM05D003437 ORTHO05D004070 6.1e-24 114.4 86 65.1
Dinv39146 Davidia involucrata HOM05D003437 ORTHO05D004070 6.1e-24 114.4 99 57.6
vmacro00199 Vaccinium macrocarpon HOM05D003437 ORTHO05D004070 6.1e-24 114.4 98 61.2
BcaC02g11694 Brassica carinata HOM05D003437 ORTHO05D004070 8.0e-24 114.0 99 57.6
C04p12280 Brassica napus HOM05D003437 ORTHO05D004070 8.0e-24 114.0 99 57.6
BolC4t22874H Brassica oleracea HOM05D003437 ORTHO05D004070 8.0e-24 114.0 99 57.6
BraA04t18214Z Brassica rapa HOM05D003437 ORTHO05D004070 8.0e-24 114.0 89 61.8
Ciclev10019980m.g Citrus clementina HOM05D003437 ORTHO05D004070 8.0e-24 114.0 101 57.4
Lalb_Chr09g0330131 Lupinus albus HOM05D003437 ORTHO05D004070 8.0e-24 114.0 99 56.6
GSVIVG01006161001 Vitis vinifera HOM05D003437 ORTHO05D004070 8.0e-24 114.0 99 58.6
Aqoxy7G00748 Aquilegia oxysepala HOM05D003437 ORTHO05D004070 1.0e-23 113.6 87 60.9
Os10g0555100 Oryza sativa ssp. japonica HOM05D003437 ORTHO05D004070 1.0e-23 113.6 99 56.6
Peaxi162Scf00174g00025 Petunia axillaris HOM05D003437 ORTHO05D004070 1.0e-23 113.6 86 64.0
Sp4g17980 Schrenkiella parvula HOM05D003437 ORTHO05D004070 1.0e-23 113.6 87 62.1
Zm00001eb429610 Zea mays HOM05D003437 ORTHO05D004070 1.0e-23 113.6 113 54.9
Atru.chr9.1314 Acer truncatum HOM05D003437 ORTHO05D004070 1.4e-23 113.2 87 63.2
Zm00001eb074520 Zea mays HOM05D003437 ORTHO05D004070 1.4e-23 113.2 113 54.0
Manes.02G039400 Manihot esculenta HOM05D003437 ORTHO05D004070 1.8e-23 112.8 99 57.6
Nitab4.5_0005960g0010 Nicotiana tabacum HOM05D003437 ORTHO05D004070 1.8e-23 112.8 98 60.2
vmacro14084 Vaccinium macrocarpon HOM05D003437 ORTHO05D004070 1.8e-23 112.8 98 57.1
AL4G31800 Arabidopsis lyrata HOM05D003437 ORTHO05D004070 2.3e-23 112.5 87 60.9
AT2G35710 Arabidopsis thaliana HOM05D003437 ORTHO05D004070 2.3e-23 112.5 87 60.9
Thhalv10016563m.g Eutrema salsugineum HOM05D003437 ORTHO05D004070 2.3e-23 112.5 87 62.1
Nitab4.5_0000312g0110 Nicotiana tabacum HOM05D003437 ORTHO05D004070 2.3e-23 112.5 98 59.2
Os04g0553800 Oryza sativa ssp. japonica HOM05D003437 ORTHO05D004070 2.3e-23 112.5 113 54.9
BcaC02g07678 Brassica carinata HOM05D003437 ORTHO05D004070 3.0e-23 112.1 87 62.1
A01p20740 Brassica napus HOM05D003437 ORTHO05D004070 3.0e-23 112.1 99 57.6
C04p64670 Brassica napus HOM05D003437 ORTHO05D004070 3.0e-23 112.1 87 62.1
BolC4t27944H Brassica oleracea HOM05D003437 ORTHO05D004070 3.0e-23 112.1 87 62.1
BraA01t01998Z Brassica rapa HOM05D003437 ORTHO05D004070 3.0e-23 112.1 99 57.6
Glyma.01G209600 Glycine max HOM05D003437 ORTHO05D004070 3.0e-23 112.1 100 59.0
Lj4g0025080 Lotus japonicus HOM05D003437 ORTHO05D004070 3.0e-23 112.1 99 56.6
Nitab4.5_0001076g0110 Nicotiana tabacum HOM05D003437 ORTHO05D004070 3.0e-23 112.1 112 52.7
Lj2g0015856 Lotus japonicus HOM05D003437 ORTHO05D004070 5.2e-23 111.3 99 57.6
Rhsim07G0108400 Rhododendron simsii HOM05D003437 ORTHO05D004070 5.2e-23 111.3 98 56.1
VMungo1215G3028 Vigna mungo HOM05D003437 ORTHO05D004070 5.2e-23 111.3 96 59.4
BcaB06g28863 Brassica carinata HOM05D003437 ORTHO05D004070 6.7e-23 110.9 86 61.6
Lalb_Chr05g0214481 Lupinus albus HOM05D003437 ORTHO05D004070 6.7e-23 110.9 99 58.6
THA.LOC104812777 Tarenaya hassleriana HOM05D003437 ORTHO05D004070 6.7e-23 110.9 88 62.5
C01p26090 Brassica napus HOM05D003437 ORTHO05D004070 8.8e-23 110.5 99 56.6
Carub.0004s1744 Capsella rubella HOM05D003437 ORTHO05D004070 8.8e-23 110.5 99 54.5
Solyc08g078650.3 Solanum lycopersicum HOM05D003437 ORTHO05D004070 8.8e-23 110.5 86 61.6
Sopen08g027130 Solanum pennellii HOM05D003437 ORTHO05D004070 8.8e-23 110.5 86 61.6
PGSC0003DMG400004758 Solanum tuberosum HOM05D003437 ORTHO05D004070 8.8e-23 110.5 86 61.6
A04p27160 Brassica napus HOM05D003437 ORTHO05D004070 1.2e-22 110.2 87 60.9
BolC1t02554H Brassica oleracea HOM05D003437 ORTHO05D004070 1.2e-22 110.2 99 55.6
THA.LOC104814476 Tarenaya hassleriana HOM05D003437 ORTHO05D004070 1.2e-22 110.2 99 55.6
CARHR129950 Cardamine hirsuta HOM05D003437 ORTHO05D004070 1.5e-22 109.8 87 59.8
Nitab4.5_0000618g0030 Nicotiana tabacum HOM05D003437 ORTHO05D004070 2.0e-22 109.4 112 51.8
Potri.003G076800 Populus trichocarpa HOM05D003437 ORTHO05D004070 2.0e-22 109.4 87 60.9
Sabra03G0047200 Salix brachista HOM05D003437 ORTHO05D004070 2.0e-22 109.4 87 63.2
Thhalv10027002m.g Eutrema salsugineum HOM05D003437 ORTHO05D004070 3.3e-22 108.6 87 60.9
Medtr5g012590 Medicago truncatula HOM05D003437 ORTHO05D004070 3.3e-22 108.6 97 55.7
SalBow6G4064 Salvia bowleyana HOM05D003437 ORTHO05D004070 4.4e-22 108.2 99 55.6
Sp7g15220 Schrenkiella parvula HOM05D003437 ORTHO05D004070 4.4e-22 108.2 87 60.9
THA.LOC104815495 Tarenaya hassleriana HOM05D003437 ORTHO05D004070 4.4e-22 108.2 108 50.0
arahy.Tifrunner.gnm1.ann1.L44UVB Arachis hypogaea HOM05D003437 ORTHO05D004070 5.7e-22 107.8 99 54.5
Oeu020147.1 Olea europaea HOM05D003437 ORTHO05D004070 5.7e-22 107.8 101 56.4
ATR0317G058 Amborella trichopoda HOM05D003437 ORTHO05D004070 7.5e-22 107.5 87 57.5
AT4G16600 Arabidopsis thaliana HOM05D003437 ORTHO05D004070 9.7e-22 107.1 87 58.6
Carub.0007s2480 Capsella rubella HOM05D003437 ORTHO05D004070 9.7e-22 107.1 97 56.7
Potri.001G158000 Populus trichocarpa HOM05D003437 ORTHO05D004070 9.7e-22 107.1 87 60.9
Sabra01G0133500 Salix brachista HOM05D003437 ORTHO05D004070 9.7e-22 107.1 87 60.9
EL10Ac5g13070 Beta vulgaris HOM05D003437 ORTHO05D004070 1.3e-21 106.7 96 54.2
Glyma.11G032600 Glycine max HOM05D003437 ORTHO05D004070 1.3e-21 106.7 100 56.0
MD06G1058200 Malus domestica HOM05D003437 ORTHO05D004070 1.3e-21 106.7 99 53.5
Aa31LG2G12720 Aethionema arabicum HOM05D003437 ORTHO05D004070 1.7e-21 106.3 99 55.6
arahy.Tifrunner.gnm1.ann1.IP6Y6A Arachis hypogaea HOM05D003437 ORTHO05D004070 1.7e-21 106.3 99 53.5
BcaNung00167 Brassica carinata HOM05D003437 ORTHO05D004070 1.7e-21 106.3 99 56.6
Duzib068G1097 Durio zibethinus HOM05D003437 ORTHO05D004070 2.2e-21 105.9 99 52.5
CANSAT21G1509 Cannabis sativa HOM05D003437 ORTHO05D004070 3.7e-21 105.1 99 53.5
Peaxi162Scf02065g00021 Petunia axillaris HOM05D003437 ORTHO05D004070 3.7e-21 105.1 112 50.0
Solyc06g060710.4 Solanum lycopersicum HOM05D003437 ORTHO05D004070 3.7e-21 105.1 112 50.0
Sopen06g020830 Solanum pennellii HOM05D003437 ORTHO05D004070 3.7e-21 105.1 112 50.0
AUR62042795 Chenopodium quinoa HOM05D003437 ORTHO05D004070 4.8e-21 104.8 84 59.5
Ca_24576_v3 Cicer arietinum L. HOM05D003437 ORTHO05D004070 4.8e-21 104.8 97 52.6
Gohir.A12G217200 Gossypium hirsutum HOM05D003437 ORTHO05D004070 6.3e-21 104.4 98 53.1
CARHR223100 Cardamine hirsuta HOM05D003437 ORTHO05D004070 8.3e-21 104.0 99 54.5
Prupe.5G069400 Prunus persica HOM05D003437 ORTHO05D004070 8.3e-21 104.0 99 50.5
AUR62007516 Chenopodium quinoa HOM05D003437 ORTHO05D004070 1.1e-20 103.6 84 58.3
PGSC0003DMG400011872 Solanum tuberosum HOM05D003437 ORTHO05D004070 1.1e-20 103.6 112 49.1
Duzib084G0678 Durio zibethinus HOM05D003437 ORTHO05D004070 1.4e-20 103.2 99 50.5
Gohir.D12G219700 Gossypium hirsutum HOM05D003437 ORTHO05D004070 1.4e-20 103.2 98 52.0
Gorai.008G235400 Gossypium raimondii HOM05D003437 ORTHO05D004070 1.4e-20 103.2 98 52.0
HanXRQChr17g0549291 Helianthus annuus HOM05D003437 ORTHO05D004070 1.4e-20 103.2 96 55.2
SGA_v2.0_scaffold120G32885 Striga asiatica HOM05D003437 ORTHO05D004070 1.4e-20 103.2 87 56.3
Thecc.03G251600 Theobroma cacao HOM05D003437 ORTHO05D004070 1.4e-20 103.2 99 50.5
Actinidia14429 Actinidia chinensis HOM05D003437 ORTHO05D004070 1.8e-20 102.8 98 52.0
BcaC09g50386 Brassica carinata HOM05D003437 ORTHO05D004070 1.8e-20 102.8 99 54.5
TPR.G25920 Trifolium pratense HOM05D003437 ORTHO05D004070 1.8e-20 102.8 97 52.6
COL.COLO4_37179 Corchorus olitorius HOM05D003437 ORTHO05D004070 2.4e-20 102.4 98 51.0
Psat2g178320 Pisum sativum HOM05D003437 ORTHO05D004070 2.4e-20 102.4 97 51.5
Ah.02g116730 Amaranthus hybridus HOM05D003437 ORTHO05D004070 3.1e-20 102.1 84 58.3
AL7G38160 Arabidopsis lyrata HOM05D003437 ORTHO05D004070 5.3e-20 101.3 87 56.3
ECA232G3118 Erigeron canadensis HOM05D003437 ORTHO05D004070 5.3e-20 101.3 92 57.6
Lsat_1_v5_gn_3_138880 Lactuca sativa HOM05D003437 ORTHO05D004070 5.3e-20 101.3 97 55.7
CAN.G62.44 Capsicum annuum HOM05D003437 ORTHO05D004070 7.0e-20 100.9 111 48.6
FvH4_5g18860 Fragaria vesca HOM05D003437 ORTHO05D004070 1.6e-19 99.8 113 47.8
FAN04G0564 Fragaria x ananassa HOM05D003437 ORTHO05D004070 1.6e-19 99.8 113 47.8
FAN08G2158 Fragaria x ananassa HOM05D003437 ORTHO05D004070 1.6e-19 99.8 113 47.8
FAN13G2103 Fragaria x ananassa HOM05D003437 ORTHO05D004070 1.6e-19 99.8 113 47.8
FAN18G0225 Fragaria x ananassa HOM05D003437 ORTHO05D004070 1.6e-19 99.8 113 47.8
FAN18G1917 Fragaria x ananassa HOM05D003437 ORTHO05D004070 1.6e-19 99.8 113 47.8
Hund11596 Selenicereus undatus HOM05D003437 ORTHO05D004070 2.7e-19 99.0 84 59.5
Gohir.A08G170566 Gossypium hirsutum HOM05D003437 ORTHO05D004070 3.5e-19 98.6 99 49.5
Duzib136G0005 Durio zibethinus HOM05D003437 ORTHO05D004070 5.9e-19 97.8 99 49.5
Duzib205G0280 Durio zibethinus HOM05D003437 ORTHO05D004070 5.9e-19 97.8 99 49.5
DCAR_027774 Daucus carota HOM05D003437 ORTHO05D004070 1.3e-18 96.7 101 50.5
Sc01g0008450 Simmondsia chinensis HOM05D003437 ORTHO05D004070 2.2e-18 95.9 100 54.0
RcHm_v2.0_Chr7g0203241 Rosa chinensis HOM05D003437 ORTHO05D004070 1.1e-17 93.6 113 46.9
SGA_v2.0_scaffold146G36150 Striga asiatica HOM05D003437 ORTHO05D004070 1.2e-16 90.1 101 47.5
Gorai.004G198800 Gossypium raimondii HOM05D003437 ORTHO05D004070 1.6e-16 89.7 99 46.5
Hund14536 Selenicereus undatus HOM05D003437 ORTHO05D004070 1.6e-16 89.7 84 54.8
Gohir.D08G188766 Gossypium hirsutum HOM05D003437 ORTHO05D004070 2.7e-16 89.0 99 46.5
ClCG10G002700 Citrullus lanatus HOM05D003437 ORTHO05D004070 6.1e-16 87.8 109 44.0
Actinidia02134 Actinidia chinensis HOM05D003437 ORTHO05D004070 1.8e-15 86.3 65 60.0
SEGI_02778 Sequoiadendron giganteum HOM05D003437 ORTHO05D004070 1.8e-15 86.3 93 50.5
Sed0009249 Sechium edule HOM05D003437 ORTHO05D004070 4.4e-14 81.6 78 53.8
Mapoly0066s0014 Marchantia polymorpha HOM05D003437 ORTHO05D004070 1.7e-13 79.7 92 46.7
Ah.12g056820 Amaranthus hybridus HOM05D003437 ORTHO05D004070 4.8e-13 78.2 75 50.7
SEGI_08661 Sequoiadendron giganteum HOM05D003437 ORTHO05D004070 8.3e-13 77.4 97 44.3
Lj6A70T56 Lonicera japonica HOM05D003437 ORTHO05D004070 1.4e-12 76.6 80 55.0
CsaV3_3G002730 Cucumis sativus L. HOM05D003437 ORTHO05D004070 1.8e-12 76.3 75 52.0
MELO3C013941.2 Cucumis melo HOM05D003437 ORTHO05D004070 2.4e-12 75.9 83 49.4
SEGI_32290 Sequoiadendron giganteum HOM05D003437 ORTHO05D004070 9.1e-12 73.9 97 43.3
unitig_21.g20536 Utricularia gibba HOM05D003437 ORTHO05D004070 1.2e-11 73.6 96 43.8
SMO367G1194 Selaginella moellendorffii HOM05D003437 ORTHO05D004070 7.2e-09 64.3 92 40.2
Pp3c26_7880 Physcomitrium patens HOM05D003437 ORTHO05D004070 1.2e-08 63.5 109 37.6


User provided reference genes

Program Settings