Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028304 Vanilla planifolia HOM05D004783 ORTHO05D005581 3.4e-141 505.0 252 100.0
Zm00001eb231010 Zea mays HOM05D004783 ORTHO05D005581 5.9e-37 158.7 218 41.3
Nn2g14491 Nelumbo nucifera HOM05D004783 ORTHO05D005581 2.9e-36 156.4 247 38.1
Os02g0127600 Oryza sativa ssp. japonica HOM05D004783 ORTHO05D005581 6.6e-36 155.2 165 47.3
MBI04_g31965_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D005581 6.1e-34 148.7 167 47.3
Gohir.A02G106600 Gossypium hirsutum HOM05D004783 ORTHO05D005581 1.0e-33 147.9 246 35.0
CAN.G147.12 Capsicum annuum HOM05D004783 ORTHO05D005581 6.3e-31 138.7 247 35.6
Gohir.A05G337100 Gossypium hirsutum HOM05D004783 ORTHO05D005581 6.3e-31 138.7 246 34.1
HanXRQChr15g0495131 Helianthus annuus HOM05D004783 ORTHO05D005581 8.3e-31 138.3 246 32.9
Gohir.D04G075700 Gossypium hirsutum HOM05D004783 ORTHO05D005581 1.1e-30 137.9 246 34.6
ECA232G0714 Erigeron canadensis HOM05D004783 ORTHO05D005581 1.4e-30 137.5 246 33.3
Gorai.012G085500 Gossypium raimondii HOM05D004783 ORTHO05D005581 2.4e-30 136.7 246 34.1
Lsat_1_v5_gn_4_139140 Lactuca sativa HOM05D004783 ORTHO05D005581 3.2e-30 136.3 248 32.7
Lsat_1_v5_gn_4_139241 Lactuca sativa HOM05D004783 ORTHO05D005581 4.1e-30 136.0 253 32.8
MBI04_g31977_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D005581 9.2e-30 134.8 136 50.7
THA.LOC104800219 Tarenaya hassleriana HOM05D004783 ORTHO05D005581 1.0e-28 131.3 240 33.3
Atru.BG.182.p Acer truncatum HOM05D004783 ORTHO05D005581 3.9e-28 129.4 161 43.5
TAR622G0302 Trochodendron aralioides HOM05D004783 ORTHO05D005581 5.0e-28 129.0 160 45.0
TAR622G0815 Trochodendron aralioides HOM05D004783 ORTHO05D005581 5.0e-28 129.0 160 45.0
QL03p008874 Quercus lobata HOM05D004783 ORTHO05D005581 1.1e-27 127.9 247 34.0
CSS0049259 Camellia sinensis var. sinensis HOM05D004783 ORTHO05D005581 2.1e-26 123.6 164 42.7
TWI75G1155 Tripterygium wilfordii HOM05D004783 ORTHO05D005581 2.1e-26 123.6 215 35.8
CSS0029611 Camellia sinensis var. sinensis HOM05D004783 ORTHO05D005581 2.8e-26 123.2 164 42.7
CSS0039136 Camellia sinensis var. sinensis HOM05D004783 ORTHO05D005581 2.8e-26 123.2 164 42.7
Atru.chr9.109 Acer truncatum HOM05D004783 ORTHO05D005581 2.3e-25 120.2 161 40.4
Dinv06816 Davidia involucrata HOM05D004783 ORTHO05D005581 5.2e-25 119.0 161 41.6
SalBow6G2874 Salvia bowleyana HOM05D004783 ORTHO05D005581 5.2e-25 119.0 259 29.7
FAN27G1421 Fragaria x ananassa HOM05D004783 ORTHO05D005581 8.9e-25 118.2 193 35.8
Prupe.8G057300 Prunus persica HOM05D004783 ORTHO05D005581 8.9e-25 118.2 161 39.8
TWI79G0945 Tripterygium wilfordii HOM05D004783 ORTHO05D005581 1.5e-24 117.5 219 35.2
Actinidia24491 Actinidia chinensis HOM05D004783 ORTHO05D005581 3.4e-24 116.3 160 41.9
Glyma.14G039600 Glycine max HOM05D004783 ORTHO05D005581 4.4e-24 115.9 250 30.0
QL02p039304 Quercus lobata HOM05D004783 ORTHO05D005581 4.4e-24 115.9 161 40.4
RcHm_v2.0_Chr5g0055041 Rosa chinensis HOM05D004783 ORTHO05D005581 4.4e-24 115.9 165 38.2
Cfa010144 Carpinus fangiana HOM05D004783 ORTHO05D005581 5.8e-24 115.5 161 41.6
Hma1.2p1_0057F.1_g032040 Hydrangea macrophylla HOM05D004783 ORTHO05D005581 5.8e-24 115.5 162 38.9
Haze_23534 Corylus avellana HOM05D004783 ORTHO05D005581 7.5e-24 115.2 161 40.4
FAN15G2228 Fragaria x ananassa HOM05D004783 ORTHO05D005581 1.7e-23 114.0 185 36.8
FAN25G1477 Fragaria x ananassa HOM05D004783 ORTHO05D005581 1.7e-23 114.0 185 36.2
Rhsim01G0260800 Rhododendron simsii HOM05D004783 ORTHO05D005581 1.7e-23 114.0 162 40.7
ATR0605G071 Amborella trichopoda HOM05D004783 ORTHO05D005581 2.2e-23 113.6 188 38.8
FAN16G2696 Fragaria x ananassa HOM05D004783 ORTHO05D005581 2.2e-23 113.6 169 36.1
CiPaw.13G145000 Carya illinoinensis HOM05D004783 ORTHO05D005581 2.9e-23 113.2 162 40.1
Sc10g0000400 Simmondsia chinensis HOM05D004783 ORTHO05D005581 3.7e-23 112.8 161 37.9
FvH4_3g29690 Fragaria vesca HOM05D004783 ORTHO05D005581 4.9e-23 112.5 169 36.1
FAN10G2924 Fragaria x ananassa HOM05D004783 ORTHO05D005581 4.9e-23 112.5 185 36.2
FAN11G1373 Fragaria x ananassa HOM05D004783 ORTHO05D005581 4.9e-23 112.5 169 36.7
Phvul.008G205300 Phaseolus vulgaris HOM05D004783 ORTHO05D005581 4.9e-23 112.5 248 28.6
FAN16G1650 Fragaria x ananassa HOM05D004783 ORTHO05D005581 6.4e-23 112.1 185 36.2
MD10G1047800 Malus domestica HOM05D004783 ORTHO05D005581 6.4e-23 112.1 152 40.1
AUR62009429 Chenopodium quinoa HOM05D004783 ORTHO05D005581 8.3e-23 111.7 162 35.8
EL10Ac2g04386 Beta vulgaris HOM05D004783 ORTHO05D005581 1.1e-22 111.3 162 37.7
Peaxi162Scf00315g00041 Petunia axillaris HOM05D004783 ORTHO05D005581 1.1e-22 111.3 159 39.6
FAN05G2593 Fragaria x ananassa HOM05D004783 ORTHO05D005581 1.9e-22 110.5 169 36.1
AUR62023108 Chenopodium quinoa HOM05D004783 ORTHO05D005581 2.4e-22 110.2 159 36.5
MD05G1041400 Malus domestica HOM05D004783 ORTHO05D005581 3.2e-22 109.8 156 38.5
Sopen07g021630 Solanum pennellii HOM05D004783 ORTHO05D005581 3.2e-22 109.8 159 40.9
PGSC0003DMG400027882 Solanum tuberosum HOM05D004783 ORTHO05D005581 3.2e-22 109.8 159 40.9
Migut.L01576 Erythranthe guttata HOM05D004783 ORTHO05D005581 4.1e-22 109.4 162 37.0
CDE02G3572 Ceratophyllum demersum HOM05D004783 ORTHO05D005581 9.2e-22 108.2 214 33.6
Nitab4.5_0003308g0060 Nicotiana tabacum HOM05D004783 ORTHO05D005581 9.2e-22 108.2 159 40.3
PGR119G2361 Punica granatum HOM05D004783 ORTHO05D005581 9.2e-22 108.2 193 33.7
Cc06_g12410 Coffea canephora HOM05D004783 ORTHO05D005581 2.0e-21 107.1 161 37.3
Oeu062248.1 Olea europaea HOM05D004783 ORTHO05D005581 2.7e-21 106.7 141 40.4
Solyc07g042030.2 Solanum lycopersicum HOM05D004783 ORTHO05D005581 2.7e-21 106.7 159 40.3
CsaV3_2G007350 Cucumis sativus L. HOM05D004783 ORTHO05D005581 1.0e-20 104.8 161 40.4
Sed0014805 Sechium edule HOM05D004783 ORTHO05D005581 1.0e-20 104.8 141 41.8
Thecc.04G015500 Theobroma cacao HOM05D004783 ORTHO05D005581 2.3e-20 103.6 169 30.8
AL2G30824 Arabidopsis lyrata HOM05D004783 ORTHO05D005581 3.0e-20 103.2 222 33.3
Carub.0002s1809 Capsella rubella HOM05D004783 ORTHO05D005581 8.6e-20 101.7 193 34.2
Ciclev10024609m.g Citrus clementina HOM05D004783 ORTHO05D005581 1.1e-19 101.3 161 37.9
MSTRG.26477 Avicennia marina HOM05D004783 ORTHO05D005581 1.5e-19 100.9 159 35.2
Lj1P662T20 Lonicera japonica HOM05D004783 ORTHO05D005581 1.5e-19 100.9 155 38.7
Medtr5g088510 Medicago truncatula HOM05D004783 ORTHO05D005581 3.3e-19 99.8 233 30.5
VMungo0647G1136 Vigna mungo HOM05D004783 ORTHO05D005581 3.3e-19 99.8 244 26.6
Eucgr.J00651 Eucalyptus grandis HOM05D004783 ORTHO05D005581 5.6e-19 99.0 248 31.0
COL.COLO4_29903 Corchorus olitorius HOM05D004783 ORTHO05D005581 7.3e-19 98.6 163 31.3
Aa31LG4G9300 Aethionema arabicum HOM05D004783 ORTHO05D005581 1.2e-18 97.8 213 32.4
Cpa.g.c26548.5 Carica papaya HOM05D004783 ORTHO05D005581 1.2e-18 97.8 160 36.9
CDE12G0310 Ceratophyllum demersum HOM05D004783 ORTHO05D005581 1.2e-18 97.8 243 30.0
AT1G71210 Arabidopsis thaliana HOM05D004783 ORTHO05D005581 2.1e-18 97.1 189 35.4
Ah.16g100720 Amaranthus hybridus HOM05D004783 ORTHO05D005581 3.6e-18 96.3 160 34.4
Migut.J00915 Erythranthe guttata HOM05D004783 ORTHO05D005581 3.6e-18 96.3 155 36.1
BcaB03g14878 Brassica carinata HOM05D004783 ORTHO05D005581 6.2e-18 95.5 195 32.3
Potri.004G229100 Populus trichocarpa HOM05D004783 ORTHO05D005581 1.1e-17 94.7 161 34.2
BraA07t31317Z Brassica rapa HOM05D004783 ORTHO05D005581 1.4e-17 94.4 190 34.2
SGA_v2.0_scaffold21G09513 Striga asiatica HOM05D004783 ORTHO05D005581 1.8e-17 94.0 141 36.2
CANSAT56G4335 Cannabis sativa HOM05D004783 ORTHO05D005581 2.3e-17 93.6 160 32.5
CARHR064510 Cardamine hirsuta HOM05D004783 ORTHO05D005581 2.3e-17 93.6 192 31.2
Sabra01G0174200 Salix brachista HOM05D004783 ORTHO05D005581 6.8e-17 92.0 161 32.9
SGA_v2.0_scaffold296G47545 Striga asiatica HOM05D004783 ORTHO05D005581 6.8e-17 92.0 141 35.5
Thhalv10018115m.g Eutrema salsugineum HOM05D004783 ORTHO05D005581 8.9e-17 91.7 167 34.1
TPR.G11801 Trifolium pratense HOM05D004783 ORTHO05D005581 9.8e-16 88.2 184 34.2
FAN11G3663 Fragaria x ananassa HOM05D004783 ORTHO05D005581 1.3e-15 87.8 184 29.9
Lj4g0006774 Lotus japonicus HOM05D004783 ORTHO05D005581 1.3e-15 87.8 165 32.1
C06p45300 Brassica napus HOM05D004783 ORTHO05D005581 1.7e-15 87.4 181 33.7
A07p37560 Brassica napus HOM05D004783 ORTHO05D005581 3.7e-15 86.3 179 34.1
PSO198G0081 Papaver somniferum HOM05D004783 ORTHO05D005581 6.4e-15 85.5 248 26.6
Psat2g021520 Pisum sativum HOM05D004783 ORTHO05D005581 6.4e-15 85.5 160 33.8
Ca_06171_v3 Cicer arietinum L. HOM05D004783 ORTHO05D005581 8.3e-15 85.1 165 30.9
LjContig00564g0007311 Lotus japonicus HOM05D004783 ORTHO05D005581 8.3e-15 85.1 165 32.1
Potri.003G000701 Populus trichocarpa HOM05D004783 ORTHO05D005581 8.3e-15 85.1 135 36.3
Sp5g26370 Schrenkiella parvula HOM05D004783 ORTHO05D005581 3.2e-14 83.2 186 32.3
CDE09G0275 Ceratophyllum demersum HOM05D004783 ORTHO05D005581 4.1e-14 82.8 186 32.3
Glyma.02G276200 Glycine max HOM05D004783 ORTHO05D005581 5.4e-14 82.4 161 31.7
Gorai.003G087500 Gossypium raimondii HOM05D004783 ORTHO05D005581 2.1e-13 80.5 86 40.7
SHI25070 Sapria himalayana HOM05D004783 ORTHO05D005581 2.7e-13 80.1 105 36.2
Lalb_Chr04g0249471 Lupinus albus HOM05D004783 ORTHO05D005581 4.6e-13 79.3 164 31.7
Ah.10g038540 Amaranthus hybridus HOM05D001978 ORTHO05D003036 7.8e-13 78.6 122 31.1
arahy.Tifrunner.gnm1.ann1.U93Q4L Arachis hypogaea HOM05D004783 ORTHO05D005581 2.3e-12 77.0 184 31.0
Manes.02G133800 Manihot esculenta HOM05D004783 ORTHO05D005581 2.3e-12 77.0 79 44.3
Gohir.D03G072203 Gossypium hirsutum HOM05D004783 ORTHO05D005581 3.0e-12 76.6 85 38.8
Manes.01G175200 Manihot esculenta HOM05D004783 ORTHO05D005581 3.0e-12 76.6 76 46.1
arahy.Tifrunner.gnm1.ann1.7R7ZTH Arachis hypogaea HOM05D004783 ORTHO05D005581 1.9e-11 73.9 184 31.0
PSO063G6404 Papaver somniferum HOM05D004783 ORTHO05D005581 1.9e-11 73.9 85 40.0
SEGI_26474 Sequoiadendron giganteum HOM05D004783 ORTHO05D005581 2.5e-11 73.6 157 29.3
ECA234G4279 Erigeron canadensis HOM05D004783 ORTHO05D005581 4.3e-11 72.8 105 39.0
arahy.Tifrunner.gnm1.ann1.IFYB19 Arachis hypogaea HOM05D004783 ORTHO05D005581 1.2e-10 71.2 181 30.9


User provided reference genes

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