Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 0.0e+00 1129.0 661 100.0
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 1.2e-36 159.1 524 33.2
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 2.7e-36 157.9 718 36.4
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 7.5e-23 113.2 679 34.6
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 4.9e-22 110.5 707 33.2
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 4.1e-21 107.5 680 34.4
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.7e-19 102.1 669 33.6
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 1.7e-19 102.1 675 32.4
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 8.6e-19 99.8 670 35.1
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 1.1e-18 99.4 691 32.4
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 2.8e-17 94.7 683 33.7
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 2.8e-17 94.7 685 32.1
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 2.8e-17 94.7 665 34.1
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 3.6e-17 94.4 670 33.7
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 4.7e-17 94.0 648 33.5
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.0e-16 92.8 645 33.2
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.4e-16 92.4 651 33.8
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 6.8e-16 90.1 650 32.8
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 2.6e-15 88.2 701 32.5
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 3.4e-15 87.8 702 32.1
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 9.8e-15 86.3 653 32.6
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 1.3e-14 85.9 672 32.4
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 2.9e-14 84.7 716 33.2
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 4.9e-14 84.0 471 26.3
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 8.3e-14 83.2 671 33.2
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 8.3e-14 83.2 668 31.6
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 4.1e-13 80.9 616 34.3
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 9.2e-13 79.7 697 32.0
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 1.2e-12 79.3 679 30.3
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 2.7e-12 78.2 704 32.5
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.0e-11 76.3 679 30.8
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 1.3e-11 75.9 710 33.4
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 1.7e-11 75.5 716 29.6
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 3.0e-11 74.7 701 31.8
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 1.5e-10 72.4 652 30.8
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 4.3e-10 70.9 131 38.2
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 7.3e-10 70.1 643 31.3
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 2.1e-09 68.6 671 30.8
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.6e-09 67.8 133 39.8
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 6.2e-09 67.0 130 40.8
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 6.2e-09 67.0 674 31.9
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 8.0e-09 66.6 674 30.9
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 1.1e-08 66.2 705 32.3
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 1.1e-08 66.2 716 29.6
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.1e-08 66.2 596 25.3
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 5.2e-08 63.9 113 38.9
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 6.8e-08 63.5 675 30.7
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 8.9e-08 63.2 686 22.7
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 8.9e-08 63.2 714 30.5
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 1.2e-07 62.8 664 31.9
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 2.0e-07 62.0 637 30.6
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 3.4e-07 61.2 725 31.6
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 4.4e-07 60.8 649 30.7
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 4.4e-07 60.8 684 32.2
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 5.8e-07 60.5 380 27.4
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 5.8e-07 60.5 64 51.6
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 9.8e-07 59.7 675 30.4
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 1.3e-06 59.3 714 30.7
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 1.7e-06 58.9 244 48.0
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.7e-06 58.9 120 37.5
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.7e-06 58.9 679 31.5
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 2.2e-06 58.5 111 40.5
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.2e-06 58.5 649 30.5
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 2.2e-06 58.5 685 30.9
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 2.9e-06 58.2 495 26.7
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 4.9e-06 57.4 660 31.7
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.9e-06 57.4 641 30.0
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 6.4e-06 57.0 659 31.0
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 6.4e-06 57.0 711 30.7
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 8.3e-06 56.6 63 55.6
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 8.3e-06 56.6 40 70.0


User provided reference genes

Program Settings