Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 3.7e-123 444.9 227 100.0
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 1.3e-62 243.8 220 64.1
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 1.6e-62 243.4 222 61.3
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 8.2e-62 241.1 224 62.1
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 3.1e-61 239.2 208 63.5
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.2e-60 237.3 223 60.5
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 4.5e-60 235.3 191 65.4
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 2.9e-59 232.6 224 60.7
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 2.9e-59 232.6 219 59.8
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 6.5e-59 231.5 220 60.9
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 3.2e-58 229.2 149 75.2
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 1.2e-57 227.3 184 66.3
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 3.6e-57 225.7 221 60.2
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 3.6e-57 225.7 212 62.3
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 7.9e-57 224.6 219 57.5
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 3.9e-56 222.2 218 59.6
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 3.9e-56 222.2 221 57.9
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 8.8e-56 221.1 212 59.4
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.1e-55 220.7 150 74.0
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 1.1e-55 220.7 169 66.3
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 1.1e-55 220.7 190 65.8
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.5e-55 219.5 226 57.5
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 5.7e-55 218.4 225 57.8
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 1.3e-54 217.2 212 58.0
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.3e-54 217.2 218 58.7
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 2.2e-54 216.5 215 57.7
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 2.2e-54 216.5 229 55.9
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 2.2e-54 216.5 219 59.8
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 3.7e-54 215.7 212 59.0
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 4.8e-54 215.3 153 73.2
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 4.8e-54 215.3 192 63.0
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 4.8e-54 215.3 228 54.4
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 8.2e-54 214.5 193 62.2
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 8.2e-54 214.5 225 56.9
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 1.4e-53 213.8 216 56.5
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 1.4e-53 213.8 216 56.5
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 2.4e-53 213.0 149 72.5
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 3.1e-53 212.6 194 61.9
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 6.9e-53 211.5 212 56.6
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 9.1e-53 211.1 183 64.5
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.2e-52 210.7 149 69.8
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 1.2e-52 210.7 221 57.9
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 1.5e-52 210.3 206 56.8
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 2.0e-52 209.9 218 58.3
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 2.6e-52 209.5 189 64.6
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 3.4e-52 209.1 210 57.1
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 5.9e-52 208.4 190 64.2
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 7.7e-52 208.0 189 64.0
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 7.7e-52 208.0 189 64.0
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.7e-51 206.8 216 55.6
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 1.7e-51 206.8 214 56.5
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.7e-51 206.8 214 56.5
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 2.2e-51 206.5 189 60.3
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 2.2e-51 206.5 173 64.7
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 2.2e-51 206.5 229 52.0
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.2e-51 206.5 210 56.7
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 3.8e-51 205.7 218 58.3
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 3.8e-51 205.7 212 56.6
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 5.0e-51 205.3 151 67.5
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 8.5e-51 204.5 214 54.7
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 8.5e-51 204.5 172 63.4
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 2.5e-50 203.0 212 56.6
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 4.2e-50 202.2 218 55.0
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 4.2e-50 202.2 214 56.5
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 4.2e-50 202.2 217 55.8
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 4.2e-50 202.2 216 54.6
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 7.2e-50 201.4 149 69.1
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.2e-50 201.4 214 56.5
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 9.4e-50 201.1 218 54.1
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 9.4e-50 201.1 211 56.9
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 9.4e-50 201.1 214 56.1
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 1.2e-49 200.7 162 64.2
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 1.6e-49 200.3 220 55.9
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.1e-49 199.9 158 65.2
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 2.7e-49 199.5 143 69.9
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 2.7e-49 199.5 143 69.9
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 2.7e-49 199.5 148 68.2
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 3.6e-49 199.1 185 61.1
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 3.6e-49 199.1 216 53.7
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 6.1e-49 198.4 143 69.2
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 6.1e-49 198.4 143 69.2
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 6.1e-49 198.4 143 69.2
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 6.1e-49 198.4 140 70.0
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 7.9e-49 198.0 167 61.1
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.8e-48 196.8 218 53.2
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 3.0e-48 196.1 218 52.3
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 5.1e-48 195.3 133 71.4
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 6.7e-48 194.9 143 68.5
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 1.5e-47 193.7 150 66.7
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 2.0e-47 193.4 208 54.8
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 4.4e-47 192.2 182 58.2
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 4.4e-47 192.2 158 62.0
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 7.4e-47 191.4 149 67.1
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 6.3e-46 188.3 149 66.4
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 1.8e-45 186.8 208 53.4
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 9.1e-45 184.5 156 64.1
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 7.7e-44 181.4 205 49.3
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 7.7e-44 181.4 205 49.3
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 1.3e-43 180.6 209 53.1
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 1.5e-42 177.2 245 46.1
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.1e-39 167.5 224 49.1
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 3.8e-35 152.5 112 69.6
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 1.1e-34 151.0 125 64.8
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 1.5e-34 150.6 236 43.2
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 5.5e-34 148.7 155 55.5
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 2.3e-32 143.3 121 62.8
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 5.2e-32 142.1 130 60.0
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 2.7e-28 129.8 207 44.0
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 2.2e-27 126.7 79 77.2
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 6.5e-27 125.2 161 42.2
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 2.5e-26 123.2 76 78.9
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 6.1e-25 118.6 182 43.4
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 3.1e-21 106.3 61 75.4
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 1.7e-19 100.5 186 39.8
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.0e-16 89.7 128 47.7
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 3.0e-16 89.7 135 44.4
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 5.7e-15 85.5 124 49.2
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 9.2e-13 78.2 98 52.0
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 6.6e-11 72.0 59 64.4
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 4.3e-10 69.3 217 32.7
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 1.5e-07 60.8 85 44.7


User provided reference genes

Program Settings