Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028274 Vanilla planifolia HOM05D003460 ORTHO05D030575 3.7e-48 194.5 95 100.0
Nn1g01533 Nelumbo nucifera HOM05D003460 ORTHO05D004277 1.5e-12 76.3 87 52.9
Aqoxy7G00308 Aquilegia oxysepala HOM05D003460 ORTHO05D004277 3.2e-12 75.1 67 58.2
TAR629G2967 Trochodendron aralioides HOM05D003460 ORTHO05D004277 5.5e-12 74.3 74 51.4
CDE04G2266 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 9.5e-12 73.6 66 53.0
Nn6g33423 Nelumbo nucifera HOM05D003460 ORTHO05D004277 2.8e-11 72.0 67 53.7
CDE06G2505 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 1.4e-10 69.7 73 53.4
Os07g0648300 Oryza sativa ssp. japonica HOM05D003460 ORTHO05D004277 1.5e-09 66.2 53 56.6
TAR636G2440 Trochodendron aralioides HOM05D003460 ORTHO05D004277 2.0e-09 65.9 74 48.6
Zm00001eb000520 Zea mays HOM05D003460 ORTHO05D004277 2.6e-09 65.5 58 56.9
AUR62022565 Chenopodium quinoa HOM05D003460 ORTHO05D004277 4.4e-09 64.7 76 47.4
Migut.N01446 Erythranthe guttata HOM05D003460 ORTHO05D004277 4.4e-09 64.7 61 54.1
AUR62004357 Chenopodium quinoa HOM05D003460 ORTHO05D004277 5.7e-09 64.3 76 46.1
GSVIVG01026933001 Vitis vinifera HOM05D003460 ORTHO05D004277 9.8e-09 63.5 70 45.7
Zm00001eb404370 Zea mays HOM05D003460 ORTHO05D004277 9.8e-09 63.5 58 55.2
Lj7C512T7 Lonicera japonica HOM05D003460 ORTHO05D004277 1.3e-08 63.2 54 55.6
SGA_v2.0_scaffold11G05665 Striga asiatica HOM05D003460 ORTHO05D004277 2.2e-08 62.4 74 48.6
SGA_v2.0_scaffold43G16414 Striga asiatica HOM05D003460 ORTHO05D004277 2.8e-08 62.0 72 51.4
CAN.G78.79 Capsicum annuum HOM05D003460 ORTHO05D004277 6.3e-08 60.8 53 52.8
THA.LOC104825837 Tarenaya hassleriana HOM05D003460 ORTHO05D004277 6.3e-08 60.8 73 42.5
THA.LOC104827725 Tarenaya hassleriana HOM05D003460 ORTHO05D004277 6.3e-08 60.8 73 42.5
Glyma.18G232900 Glycine max HOM05D003460 ORTHO05D004277 8.3e-08 60.5 58 55.2
Lj3g0003387 Lotus japonicus HOM05D003460 ORTHO05D004277 8.3e-08 60.5 70 48.6
TWI59G0279 Tripterygium wilfordii HOM05D003460 ORTHO05D004277 8.3e-08 60.5 61 45.9
Lalb_Chr04g0256941 Lupinus albus HOM05D003460 ORTHO05D004277 1.1e-07 60.1 75 44.0
Psat4g205160 Pisum sativum HOM05D003460 ORTHO05D004277 1.1e-07 60.1 67 46.3
TPR.G8692 Trifolium pratense HOM05D003460 ORTHO05D004277 1.1e-07 60.1 70 45.7
Nitab4.5_0000583g0090 Nicotiana tabacum HOM05D003460 ORTHO05D004277 1.4e-07 59.7 67 43.3
Nitab4.5_0000885g0020 Nicotiana tabacum HOM05D003460 ORTHO05D004277 1.4e-07 59.7 67 43.3
CSS0048858 Camellia sinensis var. sinensis HOM05D003460 ORTHO05D004277 1.8e-07 59.3 75 41.3
Lalb_Chr17g0339611 Lupinus albus HOM05D003460 ORTHO05D004277 1.8e-07 59.3 75 44.0
Glyma.09G259400 Glycine max HOM05D003460 ORTHO05D004277 2.4e-07 58.9 53 54.7
CANSAT56G1950 Cannabis sativa HOM05D003460 ORTHO05D004277 3.1e-07 58.5 75 42.7
Atru.chr5.495 Acer truncatum HOM05D003460 ORTHO05D004277 4.1e-07 58.2 61 45.9
EL10Ac1g00416 Beta vulgaris HOM05D003460 ORTHO05D004277 4.1e-07 58.2 79 40.5
Peaxi162Scf00020g00327 Petunia axillaris HOM05D003460 ORTHO05D004277 4.1e-07 58.2 67 43.3
Ciclev10018441m.g Citrus clementina HOM05D003460 ORTHO05D004277 5.4e-07 57.8 75 38.7
SalBow3G0963 Salvia bowleyana HOM05D003460 ORTHO05D004277 5.4e-07 57.8 70 45.7
VMungo1383G3436 Vigna mungo HOM05D003460 ORTHO05D004277 5.4e-07 57.8 59 52.5
Dinv32483 Davidia involucrata HOM05D003460 ORTHO05D004277 7.0e-07 57.4 67 43.3
HanXRQChr13g0426551 Helianthus annuus HOM05D003460 ORTHO05D004277 7.0e-07 57.4 68 41.2
Aa31LG5G530 Aethionema arabicum HOM05D003460 ORTHO05D004277 9.2e-07 57.0 61 44.3
Glyma.03G009200 Glycine max HOM05D003460 ORTHO05D004277 9.2e-07 57.0 75 40.0
ATR0680G344 Amborella trichopoda HOM05D003460 ORTHO05D004277 1.2e-06 56.6 67 49.3
QL08p048825 Quercus lobata HOM05D003460 ORTHO05D004277 1.2e-06 56.6 61 45.9
Hund27274 Selenicereus undatus HOM05D003460 ORTHO05D004277 1.2e-06 56.6 76 46.1
THA.LOC104801439 Tarenaya hassleriana HOM05D003460 ORTHO05D004277 1.2e-06 56.6 76 42.1
ECA240G3092 Erigeron canadensis HOM05D003460 ORTHO05D004277 1.6e-06 56.2 68 39.7
Lsat_1_v5_gn_3_137161 Lactuca sativa HOM05D003460 ORTHO05D004277 1.6e-06 56.2 68 38.2
TPR.G37789 Trifolium pratense HOM05D003460 ORTHO05D004277 1.6e-06 56.2 67 46.3
TPR.G701 Trifolium pratense HOM05D003460 ORTHO05D030575 1.6e-06 56.2 67 46.3
Cfa003927 Carpinus fangiana HOM05D003460 ORTHO05D004277 2.0e-06 55.8 75 38.7
Os10g0550100 Oryza sativa ssp. japonica HOM05D003460 ORTHO05D004277 2.0e-06 55.8 53 49.1
Migut.O00143 Erythranthe guttata HOM05D003460 ORTHO05D004277 2.7e-06 55.5 73 46.6
Glyma.07G070700 Glycine max HOM05D003460 ORTHO05D004277 2.7e-06 55.5 75 38.7
Solyc01g094620.3 Solanum lycopersicum HOM05D003460 ORTHO05D004277 2.7e-06 55.5 67 40.3
Sopen01g038430 Solanum pennellii HOM05D003460 ORTHO05D004277 2.7e-06 55.5 67 40.3
Lalb_Chr10g0096951 Lupinus albus HOM05D003460 ORTHO05D004277 4.5e-06 54.7 65 44.6
Psat3g108400 Pisum sativum HOM05D003460 ORTHO05D004277 4.5e-06 54.7 76 44.7
Thhalv10028357m.g Eutrema salsugineum HOM05D003460 ORTHO05D004277 5.9e-06 54.3 61 44.3
FAN03G0059 Fragaria x ananassa HOM05D003460 ORTHO05D004277 5.9e-06 54.3 75 40.0
Aa31LG1G11050 Aethionema arabicum HOM05D003460 ORTHO05D004277 7.8e-06 53.9 67 40.3
Ca_23633_v3 Cicer arietinum L. HOM05D003460 ORTHO05D004277 7.8e-06 53.9 75 38.7
Cc02_g38020 Coffea canephora HOM05D003460 ORTHO05D004277 7.8e-06 53.9 73 39.7
FAN06G0746 Fragaria x ananassa HOM05D003460 ORTHO05D004277 7.8e-06 53.9 75 40.0
FAN06G4334 Fragaria x ananassa HOM05D003460 ORTHO05D004277 7.8e-06 53.9 75 40.0
FAN10G1682 Fragaria x ananassa HOM05D003460 ORTHO05D004277 7.8e-06 53.9 75 40.0
Lj1g0005367 Lotus japonicus HOM05D003460 ORTHO05D004277 7.8e-06 53.9 67 43.3
Manes.05G034300 Manihot esculenta HOM05D003460 ORTHO05D004277 7.8e-06 53.9 70 40.0


User provided reference genes

Program Settings