Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028197 Vanilla planifolia HOM05D000087 ORTHO05D005735 5.1e-128 461.1 232 100.0
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 7.3e-90 334.3 176 96.6
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 3.4e-47 192.6 172 61.0
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.7e-44 183.0 178 56.2
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 2.3e-43 179.9 177 56.5
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 1.5e-42 177.2 176 55.1
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 1.1e-40 171.0 174 53.4
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 5.3e-40 168.7 176 53.4
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 1.2e-39 167.5 170 54.7
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 5.8e-39 165.2 176 53.4
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 1.3e-38 164.1 176 49.4
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.7e-38 163.7 170 55.3
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 4.2e-37 159.1 173 52.6
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 4.2e-37 159.1 177 49.2
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 9.3e-37 157.9 176 50.6
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 1.6e-36 157.1 171 50.9
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 1.6e-36 157.1 170 51.8
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 2.1e-36 156.8 173 49.7
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 2.7e-36 156.4 173 50.3
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 4.6e-36 155.6 176 50.6
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 4.6e-36 155.6 176 50.6
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 6.0e-36 155.2 176 50.0
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 1.3e-35 154.1 176 50.0
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.3e-35 154.1 176 50.0
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 1.3e-35 154.1 173 48.0
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 1.3e-35 154.1 176 50.6
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 1.8e-35 153.7 173 50.3
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 6.7e-35 151.8 170 51.8
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 8.7e-35 151.4 170 50.6
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 1.5e-34 150.6 172 50.0
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 1.9e-34 150.2 172 51.2
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 3.3e-34 149.4 174 49.4
Cpa.g.sc363.3 Carica papaya HOM05D000087 ORTHO05D005735 9.6e-34 147.9 170 48.8
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 2.1e-33 146.7 172 50.0
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.1e-33 146.7 176 48.9
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 3.7e-33 146.0 173 49.1
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 3.7e-33 146.0 176 48.3
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 8.2e-33 144.8 119 63.0
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 2.4e-32 143.3 173 49.1
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 6.9e-32 141.7 170 44.7
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 1.2e-31 141.0 166 45.2
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.5e-31 140.6 173 44.5
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 2.6e-31 139.8 174 48.3
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.0e-30 137.9 174 47.1
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 1.0e-30 137.9 175 46.3
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 1.3e-30 137.5 173 45.7
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 2.2e-30 136.7 171 45.0
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 3.8e-30 136.0 170 42.9
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 3.8e-30 136.0 170 42.9
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 3.8e-30 136.0 174 46.0
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 1.4e-29 134.0 172 44.2
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 1.9e-29 133.7 115 60.9
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 1.9e-29 133.7 170 45.3
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 2.5e-29 133.3 172 44.8
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 4.2e-29 132.5 170 41.8
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 7.1e-29 131.7 171 46.2
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 9.3e-29 131.3 168 45.2
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 1.2e-28 131.0 170 45.9
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 1.2e-28 131.0 175 45.7
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 2.1e-28 130.2 173 45.1
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 2.7e-28 129.8 170 45.9
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 4.6e-28 129.0 114 58.8
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 1.0e-27 127.9 172 43.0
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 1.3e-27 127.5 172 41.9
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 5.1e-27 125.6 170 44.1
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 5.1e-27 125.6 170 44.1
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 5.1e-27 125.6 170 41.8
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.1e-26 124.4 170 42.9
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 1.5e-26 124.0 170 42.4
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 2.5e-26 123.2 170 43.5
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 4.3e-26 122.5 172 41.3
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 9.7e-26 121.3 115 53.9
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 1.6e-25 120.6 176 42.0
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 2.2e-25 120.2 171 40.9
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 6.3e-25 118.6 171 42.1
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 1.1e-24 117.9 163 47.2
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.8e-24 117.1 170 41.2
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 3.1e-24 116.3 113 54.9
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 2.0e-23 113.6 101 59.4
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 2.0e-23 113.6 131 49.6
FAN13G3301 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.4e-23 112.8 141 45.4
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 8.5e-22 108.2 170 40.0
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 9.4e-21 104.8 99 57.6
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 4.6e-20 102.4 133 47.4
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 4.8e-17 92.4 112 48.2
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 1.8e-16 90.5 125 41.6
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 3.4e-15 86.3 151 37.7
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 4.5e-15 85.9 97 46.4
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 4.5e-15 85.9 275 29.5
SEGI_26704 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 1.7e-14 84.0 103 40.8
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 6.5e-14 82.0 71 62.0
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 7.2e-13 78.6 76 55.3
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 2.7e-12 76.6 114 36.0
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 2.0e-10 70.5 73 53.4
CSS0050207 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 5.7e-10 68.9 97 40.2
Hma1.2p1_0198F.1_g085360 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 1.3e-09 67.8 97 40.2
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 4.5e-07 59.3 131 32.1
Rhsim02G0255800 Rhododendron simsii HOM05D000087 ORTHO05D005735 7.7e-07 58.5 103 35.9
Medtr3g080660 Medicago truncatula HOM05D000087 ORTHO05D005735 8.5e-06 55.1 99 33.3


User provided reference genes

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